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feat(microscopy): add dicom microscopy extension and mode (#3247)

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* skeleton for dicom-microscopy extension

* skeleton for microscopy mode

* [feat] ported @radicalimaging/microscopy-dicom to OHIF's default extension

* [feat] ported microscopy mode from private repo

* added new definitions to the package.json

* webpack configuration update for microscopy extension

* register new icons for microscopy tools

* fixes to the microscopy extension and mode

* trivial error fix - typescript type import error

* link microscopy extension with default OHIF app plugin config

* demo config fix

* fix logs

* remove unsed imports

* [fix] loading of microscopy

* [fix] webworker script loading, normalizing denaturalized dataset

* found the latest version of dicom-microscopy-viewer that works with current OHIF extension : 0.35.2

* hide thumbnail pane by default, as we have issues with

* comments

* remove unused code

* [feat] microscopy - annotation selection

* [feat] microscopy - edit annotation label

* wip

* [bugfix] dicom-microscopy tool

* [bugfix] dicom microscopy annotations

* [fix] mixed-content blocking caused by BulkDataURI

* [fix] microscopy measurements panel - center button

* [fix] microscopy measurements panel - styling

* [fix] microscopy - controls

* fix local loading of microscopy

* fix local loading of dicom microscopy

* fix typo - indexof to indexOf

* [fix] remove unused icons

* remove commented out lines from webpack configuration

* platform/viewer/public/config/default.js - revert accidental changes

* [refactor] redirecting to microscopy mode on Local mode

* attribution to DMV and SLIM viewer

* [fix] code review feedbacks

* fix thumbnails

* [fix] microscopy - fix old publisher.publish() to PubSubService._broadcastEvent()

* [fix] interactions, webpack config, roi selection

* [feat] microscopy - remove select tool  from UI

* microscopy author

* [fix] saving and loading SR

* [bugfix] - missing publish() function in MicroscopyService, replace with _broadcastEvent

* remove author section from readme

* refactor SR saving feature

* fix webpack config after merge

* [bugfix] repeated import

* fix e2e

* webpack configuration

* hide "Create report" button for microscopy
This commit is contained in:
M.D authored and GitHub committed 2023-04-27 20:53:52 -04:00
1 parent dd3944a87c
commit 075008c674
76 files changed
+5868 -31
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platform/ui/src/components/Icon/getIcon.js
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@@ -97,6 +97,9 @@ import toolRectangle from './../../assets/icons/tool-rectangle.svg';
import toolFusionColor from './../../assets/icons/tool-fusion-color.svg';
import toolCreateThreshold from './../../assets/icons/tool-create-threshold.svg';
import toolCalibration from './../../assets/icons/tool-calibration.svg';
import toolFreehand from './../../assets/icons/tool-freehand.svg';
import toolFreehandPolygon from './../../assets/icons/tool-freehand-polygon.svg';
import toolPolygon from './../../assets/icons/tool-polygon.svg';
import editPatient from './../../assets/icons/edit-patient.svg';
import panelGroupMore from './../../assets/icons/panel-group-more.svg';
import panelGroupOpenClose from './../../assets/icons/panel-group-open-close.svg';
@@ -216,6 +219,11 @@ const ICONS = {
'tool-fusion-color': toolFusionColor,
'tool-create-threshold': toolCreateThreshold,
'tool-calibration': toolCalibration,
'tool-point': toolCircle,
'tool-circle': toolCircle,
'tool-freehand-line': toolFreehand,
'tool-freehand-polygon': toolFreehandPolygon,
'tool-polygon': toolPolygon,
'edit-patient': editPatient,
'icon-mpr': iconMPR,
'icon-next-inactive': iconNextInactive,