OHIF-20 Moving multi-frame related functionality to metaDataProvider / Created new library with parsing utilities.

This commit is contained in:
Emanuel F. Oliveira committed 2016-11-03 23:54:04 -02:00
1 parent 952f4d1a60
commit 1122594d2b
3 files changed
+110 -5

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@@ -1,3 +1,5 @@
import {parsingUtils} from './parsingUtils'
var metaDataLookup = {};
/**
@@ -102,6 +104,7 @@ updateMetaData = function(image) {
imageMetaData.instance.frameIncrementPointer = imageMetaData.instance.frameIncrementPointer || image.data.string('x00280009');
imageMetaData.instance.frameTime = imageMetaData.instance.frameTime || image.data.string('x00181063');
imageMetaData.instance.frameTimeVector = imageMetaData.instance.frameTimeVector || image.data.string('x00181065');
imageMetaData.instance.multiframeMetadata = getMultiframeModuleMetaData(image.data);
imageMetaData.imagePlane = imageMetaData.imagePlane || getImagePlane(imageMetaData.instance);
};
@@ -150,6 +153,69 @@ function getImagePlane(instance) {
};
}
/**
* This function extracts miltiframe information from a dicomParser.DataSet object.
*
* @param dataSet {Object} An instance of dicomParser.DataSet object where multiframe information can be found.
* @return {Object} An object containing multiframe image metadata (frameIncrementPointer, frameTime, frameTimeVector, etc).
*/
getMultiframeModuleMetaData = function(dataSet) {
var numberOfFrames,
frameIncrementPointer,
frameTime,
frameTimeVector,
imageInfo = {
isMultiframeImage: false,
frameIncrementPointer: null,
numberOfFrames: 0,
frameTime: 0,
frameTimeVector: null,
averageFrameRate: 0 // backwards compatibility only... it might be useless in the future
};
if (parsingUtils.isValidDataSet(dataSet)) {
// (0028,0008) = Number of Frames
numberOfFrames = dataSet.intString('x00280008', -1);
if (numberOfFrames > 0) {
// set multi-frame image indicator
imageInfo.isMultiframeImage = true;
imageInfo.numberOfFrames = numberOfFrames;
// (0028,0009) = Frame Increment Pointer
frameIncrementPointer = parsingUtils.attributeTag(dataSet, 'x00280009') || '';
if (frameIncrementPointer === 'x00181065') {
// Frame Increment Pointer points to Frame Time Vector (0018,1065) field
frameTimeVector = parsingUtils.floatArray(dataSet, 'x00181065');
if (frameTimeVector instanceof Array && frameTimeVector.length > 0) {
imageInfo.frameIncrementPointer = 'frameTimeVector';
imageInfo.frameTimeVector = frameTimeVector;
frameTime = frameTimeVector.reduce((a, b) => a + b) / frameTimeVector.length;
imageInfo.averageFrameRate = 1000 / frameTime;
}
} else if (frameIncrementPointer === 'x00181063' || frameIncrementPointer === '') {
// Frame Increment Pointer points to Frame Time (0018,1063) field or is not defined (for addtional flexibility).
// Yet another value is possible for this field (5200,9230 for Multi-frame Functional Groups)
// but that case is currently not supported.
frameTime = dataSet.floatString('x00181063', -1);
if (frameTime > 0) {
imageInfo.frameIncrementPointer = 'frameTime';
imageInfo.frameTime = frameTime;
imageInfo.averageFrameRate = 1000 / frameTime;
}
}
}
}
return imageInfo;
};
/**
* Looks up metaData for Cornerstone Tools given a specified type and imageId
* A type may be, e.g. 'study', or 'patient', or 'imagePlane'. These types