From 59cdc4ba9a1a99095021b3515689caf252893bfe Mon Sep 17 00:00:00 2001
From: Igor Octaviano <igoroctaviano@gmail.com>
Date: Mon, 19 Jun 2023 10:31:04 -0300
Subject: [PATCH] fix(SEG): Missing SpacingBetweenSlices prevents SEG rendering
 (#3344)

Co-authored-by: Igor Octaviano <igor.octaviano@radicalimaging.com>
---
 .../viewports/OHIFCornerstoneSEGViewport.tsx    | 17 +++++++++++++----
 1 file changed, 13 insertions(+), 4 deletions(-)

diff --git a/extensions/cornerstone-dicom-seg/src/viewports/OHIFCornerstoneSEGViewport.tsx b/extensions/cornerstone-dicom-seg/src/viewports/OHIFCornerstoneSEGViewport.tsx
index 08ed004f0..0df1a29da 100644
--- a/extensions/cornerstone-dicom-seg/src/viewports/OHIFCornerstoneSEGViewport.tsx
+++ b/extensions/cornerstone-dicom-seg/src/viewports/OHIFCornerstoneSEGViewport.tsx
@@ -71,7 +71,8 @@ function OHIFCornerstoneSEGViewport(props) {
 
   const referencedDisplaySet = segDisplaySet.getReferenceDisplaySet();
   const referencedDisplaySetMetadata = _getReferencedDisplaySetMetadata(
-    referencedDisplaySet
+    referencedDisplaySet,
+    segDisplaySet
   );
 
   referencedDisplaySetRef.current = {
@@ -381,20 +382,28 @@ OHIFCornerstoneSEGViewport.defaultProps = {
   customProps: {},
 };
 
-function _getReferencedDisplaySetMetadata(referencedDisplaySet) {
+function _getReferencedDisplaySetMetadata(referencedDisplaySet, segDisplaySet) {
+  const {
+    SharedFunctionalGroupsSequence: [SharedFunctionalGroup],
+  } = segDisplaySet.instance;
+  const {
+    PixelMeasuresSequence: [PixelMeasures],
+  } = SharedFunctionalGroup;
+  const { SpacingBetweenSlices, SliceThickness } = PixelMeasures;
+
   const image0 = referencedDisplaySet.images[0];
   const referencedDisplaySetMetadata = {
     PatientID: image0.PatientID,
     PatientName: image0.PatientName,
     PatientSex: image0.PatientSex,
     PatientAge: image0.PatientAge,
-    SliceThickness: image0.SliceThickness,
+    SliceThickness: image0.SliceThickness || SliceThickness,
     StudyDate: image0.StudyDate,
     SeriesDescription: image0.SeriesDescription,
     SeriesInstanceUID: image0.SeriesInstanceUID,
     SeriesNumber: image0.SeriesNumber,
     ManufacturerModelName: image0.ManufacturerModelName,
-    SpacingBetweenSlices: image0.SpacingBetweenSlices,
+    SpacingBetweenSlices: image0.SpacingBetweenSlices || SpacingBetweenSlices,
   };
 
   return referencedDisplaySetMetadata;