OHIF with Cornerstone3D 2.0 (#4347)

modes/preclinical-4d/src/getWorkflowSettings.ts

@@ -2,12 +2,11 @@ const dynamicVolume = {
   sopClassHandler:
     '@ohif/extension-cornerstone-dynamic-volume.sopClassHandlerModule.dynamic-volume',
   leftPanel: '@ohif/extension-cornerstone-dynamic-volume.panelModule.dynamic-volume',
-  toolBox: '@ohif/extension-cornerstone-dynamic-volume.panelModule.dynamic-toolbox',
-  export: '@ohif/extension-cornerstone-dynamic-volume.panelModule.dynamic-export',
+  segmentation: '@ohif/extension-cornerstone-dynamic-volume.panelModule.dynamic-segmentation',
 };
 
 const cornerstone = {
-  segmentation: '@ohif/extension-cornerstone-dicom-seg.panelModule.panelSegmentation',
+  segmentation: '@ohif/extension-cornerstone.panelModule.panelSegmentationNoHeader',
   activeViewportWindowLevel: '@ohif/extension-cornerstone.panelModule.activeViewportWindowLevel',
 };
 
@@ -60,7 +59,7 @@ function getWorkflowSettings({ servicesManager }) {
         layout: {
           panels: {
             left: defaultLeftPanel,
-            right: [[dynamicVolume.toolBox, cornerstone.segmentation, dynamicVolume.export]],
+            right: [[dynamicVolume.segmentation]],
           },
           options: {
             leftPanelClosed: false,

modes/preclinical-4d/src/index.tsx

@@ -36,7 +36,7 @@ function modeFactory({ modeConfiguration }) {
   return {
     id,
     routeName: 'dynamic-volume',
-    displayName: '4D PT/CT',
+    displayName: 'Preclinical 4D',
     onModeEnter: function ({ servicesManager, extensionManager, commandsManager }: withAppTypes) {
       const {
         measurementService,
@@ -64,11 +64,31 @@ function modeFactory({ modeConfiguration }) {
       // specific to the step
       customizationService.addModeCustomizations([
         {
-          id: 'segmentation.panel',
-          segmentationPanelMode: 'expanded',
-          addSegment: false,
+          id: 'PanelSegmentation.tableMode',
+          mode: 'expanded',
+        },
+        {
+          id: 'PanelSegmentation.onSegmentationAdd',
           onSegmentationAdd: () => {
-            commandsManager.run('createNewLabelmapFromPT');
+            commandsManager.run('createNewLabelMapForDynamicVolume');
+          },
+        },
+        {
+          id: 'PanelSegmentation.showAddSegment',
+          showAddSegment: false,
+        },
+        {
+          id: 'PanelSegmentation.readableText',
+          // remove following if you are not interested in that stats
+          readableText: {
+            lesionStats: 'Lesion Statistics',
+            minValue: 'Minimum Value',
+            maxValue: 'Maximum Value',
+            meanValue: 'Mean Value',
+            volume: 'Volume',
+            suvPeak: 'SUV Peak',
+            suvMax: 'Maximum SUV',
+            suvMaxIJK: 'SUV Max IJK',
           },
         },
       ]);

modes/preclinical-4d/src/initToolGroups.tsx

@@ -33,7 +33,10 @@ function _initToolGroups(toolNames, Enums, toolGroupService, commandsManager, se
         toolName: toolNames.Zoom,
         bindings: [{ mouseButton: Enums.MouseBindings.Secondary }],
       },
-      { toolName: toolNames.StackScrollMouseWheel, bindings: [] },
+      {
+        toolName: toolNames.StackScroll,
+        bindings: [{ mouseButton: Enums.MouseBindings.Wheel }],
+      },
     ],
     passive: [
       { toolName: toolNames.Length },
@@ -100,9 +103,8 @@ function _initToolGroups(toolNames, Enums, toolGroupService, commandsManager, se
       { toolName: toolNames.SphereScissors },
       { toolName: toolNames.StackScroll },
       { toolName: toolNames.Magnify },
-      { toolName: toolNames.SegmentationDisplay },
     ],
-    enabled: [{ toolName: toolNames.SegmentationDisplay }],
+    enabled: [],
     disabled: [
       {
         toolName: toolNames.Crosshairs,