TrizTech/ohif-viewer
15
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

Check study instances whether they have image data based on sopClassUid instead of rows

Browse Source
This commit is contained in:
Evren Ozkan 2016-05-02 19:14:47 -04:00
parent dfcb33153f
commit 896cc715ea
5 changed files with 182 additions and 4 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

4
Packages/viewerbase/lib/createStacks.js
View File

@ -22,9 +22,9 @@ createStacks = function(study) {
} }
// Don't display thumbnails for non-image modalities // Don't display thumbnails for non-image modalities
// All imaging modalities must have a valid value for rows (or columns) // All imaging modalities must have a valid value for sopClassUid
var anInstance = series.instances[0]; var anInstance = series.instances[0];
if (!anInstance || !anInstance.rows) { if (!anInstance || !isImage(anInstance.sopClassUid)) {
return; return;
} }

59
Packages/viewerbase/lib/isImage.js Normal file
View File

@ -0,0 +1,59 @@
/**
* Checks whether dicom files with specified SOP Class UID have image data
* @param {string} sopClassUid - SOP Class UID to be checked
* @returns {boolean} - true if it has image data
*/
isImage = function(sopClassUid) {
if (sopClassUid == sopClassDictionary.ComputedRadiographyImageStorage
|| sopClassUid == sopClassDictionary.DigitalXRayImageStorageForPresentation
|| sopClassUid == sopClassDictionary.DigitalXRayImageStorageForProcessing
|| sopClassUid == sopClassDictionary.DigitalMammographyXRayImageStorageForPresentation
|| sopClassUid == sopClassDictionary.DigitalMammographyXRayImageStorageForProcessing
|| sopClassUid == sopClassDictionary.DigitalIntraOralXRayImageStorageForPresentation
|| sopClassUid == sopClassDictionary.DigitalIntraOralXRayImageStorageForProcessing
|| sopClassUid == sopClassDictionary.CTImageStorage
|| sopClassUid == sopClassDictionary.EnhancedCTImageStorage
|| sopClassUid == sopClassDictionary.LegacyConvertedEnhancedCTImageStorage
|| sopClassUid == sopClassDictionary.UltrasoundMultiframeImageStorage
|| sopClassUid == sopClassDictionary.MRImageStorage
|| sopClassUid == sopClassDictionary.EnhancedMRImageStorage
|| sopClassUid == sopClassDictionary.EnhancedMRColorImageStorage
|| sopClassUid == sopClassDictionary.LegacyConvertedEnhancedMRImageStorage
|| sopClassUid == sopClassDictionary.UltrasoundImageStorage
|| sopClassUid == sopClassDictionary.SecondaryCaptureImageStorage
|| sopClassUid == sopClassDictionary.MultiframeSingleBitSecondaryCaptureImageStorage
|| sopClassUid == sopClassDictionary.MultiframeGrayscaleByteSecondaryCaptureImageStorage
|| sopClassUid == sopClassDictionary.MultiframeGrayscaleWordSecondaryCaptureImageStorage
|| sopClassUid == sopClassDictionary.MultiframeTrueColorSecondaryCaptureImageStorage
|| sopClassUid == sopClassDictionary.XRayAngiographicImageStorage
|| sopClassUid == sopClassDictionary.EnhancedXAImageStorage
|| sopClassUid == sopClassDictionary.XRayRadiofluoroscopicImageStorage
|| sopClassUid == sopClassDictionary.EnhancedXRFImageStorage
|| sopClassUid == sopClassDictionary.XRay3DAngiographicImageStorage
|| sopClassUid == sopClassDictionary.XRay3DCraniofacialImageStorage
|| sopClassUid == sopClassDictionary.BreastTomosynthesisImageStorage
|| sopClassUid == sopClassDictionary.BreastProjectionXRayImageStorageForPresentation
|| sopClassUid == sopClassDictionary.BreastProjectionXRayImageStorageForProcessing
|| sopClassUid == sopClassDictionary.IntravascularOpticalCoherenceTomographyImageStorageForPresentation
|| sopClassUid == sopClassDictionary.IntravascularOpticalCoherenceTomographyImageStorageForProcessing
|| sopClassUid == sopClassDictionary.NuclearMedicineImageStorage
|| sopClassUid == sopClassDictionary.VLEndoscopicImageStorage
|| sopClassUid == sopClassDictionary.VideoEndoscopicImageStorage
|| sopClassUid == sopClassDictionary.VLMicroscopicImageStorage
|| sopClassUid == sopClassDictionary.VideoMicroscopicImageStorage
|| sopClassUid == sopClassDictionary.VLSlideCoordinatesMicroscopicImageStorage
|| sopClassUid == sopClassDictionary.VLPhotographicImageStorage
|| sopClassUid == sopClassDictionary.VideoPhotographicImageStorage
|| sopClassUid == sopClassDictionary.OphthalmicPhotography8BitImageStorage
|| sopClassUid == sopClassDictionary.OphthalmicPhotography16BitImageStorage
|| sopClassUid == sopClassDictionary.OphthalmicTomographyImageStorage
|| sopClassUid == sopClassDictionary.VLWholeSlideMicroscopyImageStorage
|| sopClassUid == sopClassDictionary.PositronEmissionTomographyImageStorage
|| sopClassUid == sopClassDictionary.EnhancedPETImageStorage
|| sopClassUid == sopClassDictionary.LegacyConvertedEnhancedPETImageStorage
|| sopClassUid == sopClassDictionary.RTImageStorage) {
return true;
}
return false;
};

115
Packages/viewerbase/lib/sopClassDictionary.js Normal file
View File

@ -0,0 +1,115 @@
sopClassDictionary = {
ComputedRadiographyImageStorage: "1.2.840.10008.5.1.4.1.1.1",
DigitalXRayImageStorageForPresentation: "1.2.840.10008.5.1.4.1.1.1.1",
DigitalXRayImageStorageForProcessing: "1.2.840.10008.5.1.4.1.1.1.1.1",
DigitalMammographyXRayImageStorageForPresentation: "1.2.840.10008.5.1.4.1.1.1.2",
DigitalMammographyXRayImageStorageForProcessing: "1.2.840.10008.5.1.4.1.1.1.2.1",
DigitalIntraOralXRayImageStorageForPresentation: "1.2.840.10008.5.1.4.1.1.1.3",
DigitalIntraOralXRayImageStorageForProcessing: "1.2.840.10008.5.1.4.1.1.1.3.1",
CTImageStorage: "1.2.840.10008.5.1.4.1.1.2",
EnhancedCTImageStorage: "1.2.840.10008.5.1.4.1.1.2.1",
LegacyConvertedEnhancedCTImageStorage: "1.2.840.10008.5.1.4.1.1.2.2",
UltrasoundMultiframeImageStorage: "1.2.840.10008.5.1.4.1.1.3.1",
MRImageStorage: "1.2.840.10008.5.1.4.1.1.4",
EnhancedMRImageStorage: "1.2.840.10008.5.1.4.1.1.4.1",
MRSpectroscopyStorage: "1.2.840.10008.5.1.4.1.1.4.2",
EnhancedMRColorImageStorage: "1.2.840.10008.5.1.4.1.1.4.3",
LegacyConvertedEnhancedMRImageStorage: "1.2.840.10008.5.1.4.1.1.4.4",
UltrasoundImageStorage: "1.2.840.10008.5.1.4.1.1.6.1",
EnhancedUSVolumeStorage: "1.2.840.10008.5.1.4.1.1.6.2",
SecondaryCaptureImageStorage: "1.2.840.10008.5.1.4.1.1.7",
MultiframeSingleBitSecondaryCaptureImageStorage: "1.2.840.10008.5.1.4.1.1.7.1",
MultiframeGrayscaleByteSecondaryCaptureImageStorage: "1.2.840.10008.5.1.4.1.1.7.2",
MultiframeGrayscaleWordSecondaryCaptureImageStorage: "1.2.840.10008.5.1.4.1.1.7.3",
MultiframeTrueColorSecondaryCaptureImageStorage: "1.2.840.10008.5.1.4.1.1.7.4",
Sop12LeadECGWaveformStorage: "1.2.840.10008.5.1.4.1.1.9.1.1",
GeneralECGWaveformStorage: "1.2.840.10008.5.1.4.1.1.9.1.2",
AmbulatoryECGWaveformStorage: "1.2.840.10008.5.1.4.1.1.9.1.3",
HemodynamicWaveformStorage: "1.2.840.10008.5.1.4.1.1.9.2.1",
CardiacElectrophysiologyWaveformStorage: "1.2.840.10008.5.1.4.1.1.9.3.1",
BasicVoiceAudioWaveformStorage: "1.2.840.10008.5.1.4.1.1.9.4.1",
GeneralAudioWaveformStorage: "1.2.840.10008.5.1.4.1.1.9.4.2",
ArterialPulseWaveformStorage: "1.2.840.10008.5.1.4.1.1.9.5.1",
RespiratoryWaveformStorage: "1.2.840.10008.5.1.4.1.1.9.6.1",
GrayscaleSoftcopyPresentationStateStorage: "1.2.840.10008.5.1.4.1.1.11.1",
ColorSoftcopyPresentationStateStorage: "1.2.840.10008.5.1.4.1.1.11.2",
PseudoColorSoftcopyPresentationStateStorage: "1.2.840.10008.5.1.4.1.1.11.3",
BlendingSoftcopyPresentationStateStorage: "1.2.840.10008.5.1.4.1.1.11.4",
XAXRFGrayscaleSoftcopyPresentationStateStorage: "1.2.840.10008.5.1.4.1.1.11.5",
XRayAngiographicImageStorage: "1.2.840.10008.5.1.4.1.1.12.1",
EnhancedXAImageStorage: "1.2.840.10008.5.1.4.1.1.12.1.1",
XRayRadiofluoroscopicImageStorage: "1.2.840.10008.5.1.4.1.1.12.2",
EnhancedXRFImageStorage: "1.2.840.10008.5.1.4.1.1.12.2.1",
XRay3DAngiographicImageStorage: "1.2.840.10008.5.1.4.1.1.13.1.1",
XRay3DCraniofacialImageStorage: "1.2.840.10008.5.1.4.1.1.13.1.2",
BreastTomosynthesisImageStorage: "1.2.840.10008.5.1.4.1.1.13.1.3",
BreastProjectionXRayImageStorageForPresentation: "1.2.840.10008.5.1.4.1.1.13.1.4",
BreastProjectionXRayImageStorageForProcessing: "1.2.840.10008.5.1.4.1.1.13.1.5",
IntravascularOpticalCoherenceTomographyImageStorageForPresentation: "1.2.840.10008.5.1.4.1.1.14.1",
IntravascularOpticalCoherenceTomographyImageStorageForProcessing: "1.2.840.10008.5.1.4.1.1.14.2",
NuclearMedicineImageStorage: "1.2.840.10008.5.1.4.1.1.20",
RawDataStorage: "1.2.840.10008.5.1.4.1.1.66",
SpatialRegistrationStorage: "1.2.840.10008.5.1.4.1.1.66.1",
SpatialFiducialsStorage: "1.2.840.10008.5.1.4.1.1.66.2",
DeformableSpatialRegistrationStorage: "1.2.840.10008.5.1.4.1.1.66.3",
SegmentationStorage: "1.2.840.10008.5.1.4.1.1.66.4",
SurfaceSegmentationStorage: "1.2.840.10008.5.1.4.1.1.66.5",
RealWorldValueMappingStorage: "1.2.840.10008.5.1.4.1.1.67",
SurfaceScanMeshStorage: "1.2.840.10008.5.1.4.1.1.68.1",
SurfaceScanPointCloudStorage: "1.2.840.10008.5.1.4.1.1.68.2",
VLEndoscopicImageStorage: "1.2.840.10008.5.1.4.1.1.77.1.1",
VideoEndoscopicImageStorage: "1.2.840.10008.5.1.4.1.1.77.1.1.1",
VLMicroscopicImageStorage: "1.2.840.10008.5.1.4.1.1.77.1.2",
VideoMicroscopicImageStorage: "1.2.840.10008.5.1.4.1.1.77.1.2.1",
VLSlideCoordinatesMicroscopicImageStorage: "1.2.840.10008.5.1.4.1.1.77.1.3",
VLPhotographicImageStorage: "1.2.840.10008.5.1.4.1.1.77.1.4",
VideoPhotographicImageStorage: "1.2.840.10008.5.1.4.1.1.77.1.4.1",
OphthalmicPhotography8BitImageStorage: "1.2.840.10008.5.1.4.1.1.77.1.5.1",
OphthalmicPhotography16BitImageStorage: "1.2.840.10008.5.1.4.1.1.77.1.5.2",
StereometricRelationshipStorage: "1.2.840.10008.5.1.4.1.1.77.1.5.3",
OphthalmicTomographyImageStorage: "1.2.840.10008.5.1.4.1.1.77.1.5.4",
VLWholeSlideMicroscopyImageStorage: "1.2.840.10008.5.1.4.1.1.77.1.6",
LensometryMeasurementsStorage: "1.2.840.10008.5.1.4.1.1.78.1",
AutorefractionMeasurementsStorage: "1.2.840.10008.5.1.4.1.1.78.2",
KeratometryMeasurementsStorage: "1.2.840.10008.5.1.4.1.1.78.3",
SubjectiveRefractionMeasurementsStorage: "1.2.840.10008.5.1.4.1.1.78.4",
VisualAcuityMeasurementsStorage: "1.2.840.10008.5.1.4.1.1.78.5",
SpectaclePrescriptionReportStorage: "1.2.840.10008.5.1.4.1.1.78.6",
OphthalmicAxialMeasurementsStorage: "1.2.840.10008.5.1.4.1.1.78.7",
IntraocularLensCalculationsStorage: "1.2.840.10008.5.1.4.1.1.78.8",
MacularGridThicknessandVolumeReport: "1.2.840.10008.5.1.4.1.1.79.1",
OphthalmicVisualFieldStaticPerimetryMeasurementsStorage: "1.2.840.10008.5.1.4.1.1.80.1",
OphthalmicThicknessMapStorage: "1.2.840.10008.5.1.4.1.1.81.1",
CornealTopographyMapStorage: "1.2.840.10008.5.1.4.1.1.82.1",
BasicTextSR: "1.2.840.10008.5.1.4.1.1.88.11",
EnhancedSR: "1.2.840.10008.5.1.4.1.1.88.22",
ComprehensiveSR: "1.2.840.10008.5.1.4.1.1.88.33",
Comprehensive3DSR: "1.2.840.10008.5.1.4.1.1.88.34",
ProcedureLog: "1.2.840.10008.5.1.4.1.1.88.40",
MammographyCADSR: "1.2.840.10008.5.1.4.1.1.88.50",
KeyObjectSelection: "1.2.840.10008.5.1.4.1.1.88.59",
ChestCADSR: "1.2.840.10008.5.1.4.1.1.88.65",
XRayRadiationDoseSR: "1.2.840.10008.5.1.4.1.1.88.67",
RadiopharmaceuticalRadiationDoseSR: "1.2.840.10008.5.1.4.1.1.88.68",
ColonCADSR: "1.2.840.10008.5.1.4.1.1.88.69",
ImplantationPlanSRDocumentStorage: "1.2.840.10008.5.1.4.1.1.88.70",
EncapsulatedPDFStorage: "1.2.840.10008.5.1.4.1.1.104.1",
EncapsulatedCDAStorage: "1.2.840.10008.5.1.4.1.1.104.2",
PositronEmissionTomographyImageStorage: "1.2.840.10008.5.1.4.1.1.128",
EnhancedPETImageStorage: "1.2.840.10008.5.1.4.1.1.130",
LegacyConvertedEnhancedPETImageStorage: "1.2.840.10008.5.1.4.1.1.128.1",
BasicStructuredDisplayStorage: "1.2.840.10008.5.1.4.1.1.131",
RTImageStorage: "1.2.840.10008.5.1.4.1.1.481.1",
RTDoseStorage: "1.2.840.10008.5.1.4.1.1.481.2",
RTStructureSetStorage: "1.2.840.10008.5.1.4.1.1.481.3",
RTBeamsTreatmentRecordStorage: "1.2.840.10008.5.1.4.1.1.481.4",
RTPlanStorage: "1.2.840.10008.5.1.4.1.1.481.5",
RTBrachyTreatmentRecordStorage: "1.2.840.10008.5.1.4.1.1.481.6",
RTTreatmentSummaryRecordStorage: "1.2.840.10008.5.1.4.1.1.481.7",
RTIonPlanStorage: "1.2.840.10008.5.1.4.1.1.481.8",
RTIonBeamsTreatmentRecordStorage: "1.2.840.10008.5.1.4.1.1.481.9",
RTBeamsDeliveryInstructionStorage: "1.2.840.10008.5.1.4.34.7",
GenericImplantTemplateStorage: "1.2.840.10008.5.1.4.43.1",
ImplantAssemblyTemplateStorage: "1.2.840.10008.5.1.4.44.1",
ImplantTemplateGroupStorage: "1.2.840.10008.5.1.4.45.1"
};

4
Packages/viewerbase/lib/windowManager.js
View File

@ -533,9 +533,9 @@ function defaultHangingProtocol(inputData) {
study.seriesList.forEach(function(series) { study.seriesList.forEach(function(series) {
// Ensure that the series has image data // Ensure that the series has image data
// (All images have rows) // (All images have sopClassUid)
var anInstance = series.instances[0]; var anInstance = series.instances[0];
if (!anInstance || !anInstance.rows) { if (!anInstance || !isImage(anInstance.sopClassUid)) {
return; return;
} }

4
Packages/viewerbase/package.js
View File

@ -149,6 +149,8 @@ Package.onUse(function(api) {
api.addFiles('lib/queryStudies.js', 'client'); api.addFiles('lib/queryStudies.js', 'client');
api.addFiles('lib/exportStudies.js', 'client'); api.addFiles('lib/exportStudies.js', 'client');
api.addFiles('lib/importStudies.js', 'client'); api.addFiles('lib/importStudies.js', 'client');
api.addFiles('lib/isImage.js', 'client');
api.addFiles('lib/sopClassDictionary.js', 'client');
api.addFiles('lib/encodeQueryData.js', 'server'); api.addFiles('lib/encodeQueryData.js', 'server');
//api.export('accountsConfig', 'client'); //api.export('accountsConfig', 'client');
@ -172,6 +174,8 @@ Package.onUse(function(api) {
api.export('exportStudies', 'client'); api.export('exportStudies', 'client');
api.export('importStudies', 'client'); api.export('importStudies', 'client');
api.export('getActiveViewportElement', 'client'); api.export('getActiveViewportElement', 'client');
api.export('isImage', 'client');
api.export('sopClassDictionary', 'client');
api.export('encodeQueryData', 'server'); api.export('encodeQueryData', 'server');
// Viewer management objects // Viewer management objects