LT-67; OHIF-78: Merging server configuration and CINE dialog changes from downstream (Ascend)
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da7202de0f
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47 files changed
+516
-333
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@@ -1,3 +1,9 @@
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import { Mongo } from 'meteor/mongo';
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StudyImportStatus = new Mongo.Collection('studyImportStatus');
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StudyImportStatus = new Mongo.Collection('studyImportStatus');
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// Servers describe the DICOM servers configurations
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Servers = new Mongo.Collection('servers');
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// CurrentServer is a single document collection to describe which of the Servers is being used
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CurrentServer = new Mongo.Collection('currentServer');
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@@ -0,0 +1,14 @@
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/**
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* Retrieves the current server configuration used to retrieve studies
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*/
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getCurrentServer = () => {
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const currentServer = CurrentServer.findOne();
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if (!currentServer) {
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return;
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}
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const serverConfiguration = Servers.findOne({ _id: currentServer.serverId });
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return serverConfiguration;
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};
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@@ -14,6 +14,12 @@ const serverTypeDefinitions = {
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optional: true
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};
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const wadoUriRootDefinitions = {
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type: String,
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label: 'WADO URI root',
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max: 1000
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};
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export const DICOMWebRequestOptions = new SimpleSchema({
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auth: {
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type: String,
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@@ -40,11 +46,7 @@ export const DICOMWebRequestOptions = new SimpleSchema({
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export const DICOMWebServer = new SimpleSchema({
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name: serverNameDefinitions,
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type: serverTypeDefinitions,
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wadoUriRoot: {
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type: String,
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label: 'WADO URI root',
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max: 1000
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},
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wadoUriRoot: wadoUriRootDefinitions,
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wadoRoot: {
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type: String,
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label: 'WADO root',
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@@ -106,7 +108,7 @@ export const DIMSEPeer = new SimpleSchema({
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},
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supportsInstanceRetrievalByStudyUid: {
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type: Boolean,
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label: 'Supports instance retrieval by StudyUid?',
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label: 'Supports instance retrieval by StudyUid',
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defaultValue: true
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}
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});
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@@ -114,6 +116,7 @@ export const DIMSEPeer = new SimpleSchema({
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export const DIMSEServer = new SimpleSchema({
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name: serverNameDefinitions,
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type: serverTypeDefinitions,
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wadoUriRoot: wadoUriRootDefinitions,
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peers: {
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type: [DIMSEPeer],
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label: 'Peer List',
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@@ -141,6 +144,11 @@ export const UISettings = new SimpleSchema({
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type: Boolean,
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label: 'The UP/DOWN display set navigation buttons will iterate over all the viewports at once?',
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defaultValue: false
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},
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showCineDialogOnRendered: {
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type: Boolean,
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label: 'The Cine dialog will be displayed by default',
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defaultValue: false
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}
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});
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@@ -0,0 +1,2 @@
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Meteor.subscribe('servers');
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Meteor.subscribe('currentServer');
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+50
@@ -0,0 +1,50 @@
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<template name="serverInformationDicomWeb">
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<div class="row">
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<div class="col-lg-6">
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{{>inputText labelClass='form-group' key='wadoUriRoot'}}
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</div>
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<div class="col-lg-6">
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{{>inputText labelClass='form-group' key='wadoRoot'}}
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</div>
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<div class="col-lg-6">
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{{>inputSelect labelClass='form-group' key='imageRendering' hideSearch=true
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options=(clone placeholder='Select an option')}}
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</div>
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<div class="col-lg-6">
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{{>inputText labelClass='form-group' key='qidoRoot'}}
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</div>
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<div class="col-lg-6">
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<strong>QIDO options</strong>
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<div class="form-group">
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<div class="form-control">
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<div class="checkbox">
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{{>inputCheckbox key='qidoSupportsIncludeField'}}
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</div>
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</div>
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</div>
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</div>
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</div>
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<hr>
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<h4>Request options</h4>
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{{#group class='row' key='requestOptions'}}
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<div class="col-lg-6">
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{{>inputText labelClass='form-group' key='auth'}}
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</div>
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<div class="col-lg-6">
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<strong>Logging options</strong>
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<div class="form-group">
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<div class="form-control clearfix">
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<div class="checkbox pull-left">
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{{>inputCheckbox key='logRequests'}}
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</div>
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<div class="checkbox pull-left">
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{{>inputCheckbox key='logResponses'}}
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</div>
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<div class="checkbox pull-left">
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{{>inputCheckbox key='logTiming'}}
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</div>
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</div>
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</div>
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</div>
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{{/group}}
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</template>
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+10
@@ -0,0 +1,10 @@
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Template.serverInformationDicomWeb.onRendered(() => {
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const instance = Template.instance();
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instance.autorun(function() {
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const mode = instance.data.mode.get();
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if (mode === 'edit') {
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const data = instance.data.currentItem.get();
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instance.data.form.value(data);
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}
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});
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});
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+60
@@ -0,0 +1,60 @@
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<template name="serverInformationDimse">
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<div class="row">
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<div class="col-lg-6">
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{{>inputText labelClass='form-group' key='wadoUriRoot'}}
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</div>
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</div>
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<div class="panel panel-default panel-body">
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<div class="clearfix">
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<h4 class="pull-left">Peer List</h4>
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{{#button class='btn btn-primary pull-right'
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action='newPeer' params=peer
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}}New peer{{/button}}
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</div>
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<hr>
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{{#group class='row' key='peers' arrayValues=true}}
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{{#each peer in instance.peers.get}}
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{{#group class='col-lg-6'}}
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<div class="panel panel-default panel-body">
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<div class="row">
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<div class="col-lg-6">
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{{>inputText class='form-control' key='aeTitle'}}
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</div>
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<div class="col-lg-6">
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{{>inputText class='form-control' key='hostAE'}}
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</div>
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<div class="col-lg-6">
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{{>inputText class='form-control' key='host'}}
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</div>
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<div class="col-lg-6">
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{{>inputText class='form-control' key='port'}}
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</div>
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<div class="col-lg-12">
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<strong>Settings</strong>
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<div class="form-group">
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<div class="form-control height-auto clearfix">
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<div class="checkbox pull-left">
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{{>inputCheckbox key='default'}}
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</div>
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<div class="checkbox pull-left">
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{{>inputCheckbox key='server'}}
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</div>
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<div class="checkbox pull-left">
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{{>inputCheckbox key='supportsInstanceRetrievalByStudyUid'}}
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</div>
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</div>
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</div>
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</div>
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<div class="col-lg-12 text-right">
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{{#button class='btn btn-sm btn-danger'
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action='removePeer' params=@index
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}}Remove{{/button}}
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</div>
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</div>
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</div>
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{{/group}}
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{{/each}}
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{{/group}}
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</div>
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<hr>
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</template>
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+38
@@ -0,0 +1,38 @@
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Template.serverInformationDimse.onCreated(() => {
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const instance = Template.instance();
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instance.peers = new ReactiveVar([]);
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instance.autorun(() => {
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const currentItem = instance.data.currentItem.get();
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if (currentItem) {
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instance.peers.set(currentItem.peers || []);
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}
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});
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const api = instance.data.api;
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_.extend(api, {
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newPeer() {
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const peers = instance.peers.get();
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peers.push({});
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instance.peers.set(peers);
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},
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removePeer(peerIndex) {
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const peers = instance.peers.get();
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peers.splice(peerIndex, 1);
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instance.peers.set(peers);
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const data = instance.data.currentItem.get();
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data.peers = peers;
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Tracker.afterFlush(() => instance.data.form.value(data));
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}
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});
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});
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Template.serverInformationDimse.onRendered(() => {
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const instance = Template.instance();
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instance.autorun(() => {
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const mode = instance.data.mode.get();
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if (mode === 'edit') {
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const data = instance.data.currentItem.get();
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instance.data.form.value(data);
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}
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});
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});
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+27
@@ -0,0 +1,27 @@
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<template name="serverInformationForm">
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{{#form class='server-information-form' schema=instance.currentSchema api=this.api}}
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{{>inputHidden key='_id'}}
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<div class="row">
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<div class="col-lg-6">
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{{>inputText labelClass='form-group' key='name'}}
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</div>
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<div class="col-lg-6">
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{{>inputSelect labelClass='form-group' key='type'
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hideSearch=true disabled=(eq this.mode.get 'edit')
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options=(clone placeholder='Choose a server type')}}
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</div>
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</div>
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<hr>
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{{#if eq this.serverType.get 'dicomWeb'}}
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{{>serverInformationDicomWeb this}}
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{{/if}}
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{{#if eq this.serverType.get 'dimse'}}
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{{>serverInformationDimse this}}
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{{/if}}
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{{#if this.serverType.get}}
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<div>
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{{#button class='btn-primary' action='save'}}Save{{/button}}
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</div>
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{{/if}}
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{{/form}}
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</template>
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+72
@@ -0,0 +1,72 @@
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import { Template } from 'meteor/templating';
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import { ReactiveVar } from 'meteor/reactive-var';
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import { Tracker } from 'meteor/tracker';
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import { DICOMWebServer as dicomSchema } from 'meteor/worklist/both/schema.js';
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import { DIMSEServer as dimseSchema } from 'meteor/worklist/both/schema.js';
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Template.serverInformationForm.onCreated(() => {
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const instance = Template.instance();
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instance.data.api = {
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save() {
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// Stop here if the form validation fails
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if (!instance.data.form.validate()) {
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return;
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}
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// Get the current form data
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const formData = instance.data.form.value();
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// Call the save method
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Meteor.call('serverSave', formData, function(error) {
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if (error) {
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// TODO: check for errors: not-authorized, data-write
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}
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instance.data.resetState();
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});
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}
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};
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instance.currentSchema = new ReactiveVar(dicomSchema);
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});
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Template.serverInformationForm.onRendered(() => {
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const instance = Template.instance();
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instance.data.$form = instance.$('form:first');
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instance.data.form = instance.data.$form.data('component');
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// Handle the server type
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instance.autorun(() => {
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// Get the server type component
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const typeComponent = instance.$('[data-key=type] :input').data('component');
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// Run this computation every time the user change the server type
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typeComponent.depend();
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// Get the current server type value
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const type = typeComponent.value();
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// Set the serverType reactive value
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instance.data.serverType.set(type);
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// Change the schema based on the selected server type
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if (type === 'dimse') {
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instance.currentSchema.set(dimseSchema);
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} else {
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instance.currentSchema.set(dicomSchema);
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}
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});
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// Handle the form mode (edit or add)
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instance.autorun(() => {
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const mode = instance.data.mode.get();
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// Check if it is on edit mode and load the saved data
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if (mode === 'edit') {
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const data = instance.data.currentItem.get();
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instance.data.form.value(data);
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}
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});
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});
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+10
@@ -0,0 +1,10 @@
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<template name="serverInformationFormField">
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<div class="col-lg-6">
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<div class="form-group">
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<label class="wrapper">
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<span>{{this.label}}</span>
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<input type="text" name="{{this.name}}" class="form-control">
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</label>
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</div>
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</div>
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</template>
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+45
@@ -0,0 +1,45 @@
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<template name="serverInformationList">
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{{#form api=instance.api}}
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<table id="tblServer" class="table">
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<thead>
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<tr>
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<th>Name</th>
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<th>Type</th>
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<th class="text-right">Actions</th>
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</tr>
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</thead>
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<tbody>
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{{#each server in servers}}
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<tr>
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<td>{{server.name}}</td>
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<td>{{server.type}}</td>
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<td class="text-right">
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<div class="btn-group" role="group" aria-label="Actions">
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{{#button class='btn-sm btn-default' action='use' params=server title='Use this server' disabled=(isActive server)}}
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{{#if isActive server}}
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<i class="fa fa-check-square-o"></i>
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{{else}}
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<i class="fa fa-square-o"></i>
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{{/if}}
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{{/button}}
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{{#button class='btn-sm btn-default' action='edit' params=server title='Edit' disabled=(eq server.origin 'json')}}
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<i class="fa fa-pencil"></i>
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{{/button}}
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{{#button class='btn-sm btn-danger' action='delete' params=server title='Remove' disabled=(eq server.origin 'json')}}
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<i class="fa fa-trash"></i>
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{{/button}}
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</div>
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</td>
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</tr>
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{{else}}
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<tr>
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<td class="text-center" colspan="3">No servers found</td>
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</tr>
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{{/each}}
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</tbody>
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</table>
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{{#button class='btn-sm btn-default' action='add'}}
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<i class="fa fa-plus"></i> Add a new server
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{{/button}}
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{{/form}}
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</template>
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+47
@@ -0,0 +1,47 @@
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Template.serverInformationList.onCreated(() => {
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const instance = Template.instance();
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instance.api = {
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add: () => instance.data.mode.set('create'),
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edit(server) {
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instance.data.currentItem.set(server);
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instance.data.mode.set('edit');
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},
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delete(server) {
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// TODO: Replace this for confirmation dialog after LT-refactor is merged back to master
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if (!confirm('Are you sure you want to remove this peer?')) {
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return;
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}
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Meteor.call('serverRemove', server._id, error => {
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// TODO: check for errors: data-write
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});
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},
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use(server) {
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Meteor.call('serverSetActive', server._id, error => {
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// TODO: check for errors: data-write
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});
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}
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};
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});
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Template.serverInformationList.helpers({
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isActive: function(server) {
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const currentServer = CurrentServer.findOne();
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if (!currentServer) {
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return;
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}
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return server._id === currentServer.serverId;
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},
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servers: function() {
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const options = {
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sort: {
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origin: -1,
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type: 1,
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name: 1
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}
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};
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return Servers.find({}, options).fetch();
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}
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});
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+27
@@ -0,0 +1,27 @@
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<template name="serverInformationModal">
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<div class="modal" id="serverInformationModal" tabindex="-1" role="dialog" aria-labelledby="serverInformationModalLabel">
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<div class="modal-dialog modal-lg" role="document">
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<div class="modal-content">
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{{#let isList=(eq instance.container.mode.get "list")}}
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<div class="modal-header">
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<button type="button" class="close" data-dismiss="modal" aria-label="Close"><span aria-hidden="true">×</span></button>
|
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<h4 class="modal-title" id="serverInformationModalLabel">Server Information</h4>
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</div>
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<div class="modal-body">
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{{#if isList}}
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{{>serverInformationList instance.container}}
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{{else}}
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{{>serverInformationForm instance.container}}
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{{/if}}
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</div>
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<div class="modal-footer">
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{{#unless isList}}
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<button type="button" class="btn btn-default js-back">Back</button>
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{{/unless}}
|
||||
<button type="button" class="btn btn-default" data-dismiss="modal">Close</button>
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</div>
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{{/let}}
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</div>
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||||
</div>
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||||
</div>
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||||
</template>
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+20
@@ -0,0 +1,20 @@
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Template.serverInformationModal.onCreated(function() {
|
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var instance = Template.instance();
|
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instance.container = {
|
||||
mode: new ReactiveVar('list'),
|
||||
serverType: new ReactiveVar(null),
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||||
currentItem: new ReactiveVar(null),
|
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$form: null,
|
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resetState: function() {
|
||||
instance.container.mode.set('list');
|
||||
instance.container.serverType.set(null);
|
||||
instance.container.currentItem.set(null);
|
||||
}
|
||||
};
|
||||
});
|
||||
|
||||
Template.serverInformationModal.events({
|
||||
'click .js-back, click [data-dismiss=modal]': function(event, instance) {
|
||||
instance.container.resetState();
|
||||
}
|
||||
});
|
||||
+5
@@ -0,0 +1,5 @@
|
||||
.server-information-form
|
||||
label.wrapper
|
||||
display: block
|
||||
.checkbox
|
||||
margin: 0 8px 0 0
|
||||
@@ -34,6 +34,11 @@ switchToTab = function(contentId) {
|
||||
var container;
|
||||
if (contentId === 'worklistTab') {
|
||||
container = $('.tab-content').find('#worklistTab').get(0);
|
||||
|
||||
if (!container) {
|
||||
return;
|
||||
}
|
||||
|
||||
var worklistContainer = document.createElement('div');
|
||||
worklistContainer.classList.add('worklistContainer');
|
||||
container.appendChild(worklistContainer);
|
||||
|
||||
@@ -1,3 +1,6 @@
|
||||
import { Meteor } from 'meteor/meteor';
|
||||
import { Tracker } from 'meteor/tracker';
|
||||
|
||||
Worklist = {
|
||||
functions: {},
|
||||
callbacks: {}
|
||||
@@ -10,4 +13,19 @@ function dblClickOnStudy(data) {
|
||||
// Use the formatPN template helper to clean up the patient name
|
||||
var title = formatPN(data.patientName);
|
||||
openNewTab(data.studyInstanceUid, title);
|
||||
}
|
||||
}
|
||||
|
||||
let currentServerChangeHandlerFirstRun = true;
|
||||
const currentServerChangeHandler = () => {
|
||||
if (currentServerChangeHandlerFirstRun) {
|
||||
currentServerChangeHandlerFirstRun = false;
|
||||
return;
|
||||
}
|
||||
|
||||
switchToTab('worklistTab');
|
||||
};
|
||||
|
||||
CurrentServer.find().observe({
|
||||
added: currentServerChangeHandler,
|
||||
changed: currentServerChangeHandler
|
||||
});
|
||||
@@ -16,11 +16,12 @@ Package.onUse(function (api) {
|
||||
api.use('rwatts:uuid');
|
||||
api.use('silentcicero:jszip');
|
||||
api.use('aldeed:simple-schema');
|
||||
api.use('accounts-base');
|
||||
|
||||
// Note: MomentJS appears to be required for Bootstrap3 Datepicker, but not a dependency for some reason
|
||||
api.use('momentjs:moment');
|
||||
|
||||
api.use('gilbertwat:bootstrap3-daterangepicker');
|
||||
api.use('gilbertwat:bootstrap3-daterangepicker');
|
||||
|
||||
// Our custom packages
|
||||
api.use('ohif:core');
|
||||
@@ -39,9 +40,13 @@ Package.onUse(function (api) {
|
||||
// console for debugging purposes
|
||||
api.addFiles('log.js');
|
||||
|
||||
api.addFiles('both/collections.js', [ 'client', 'server' ]);
|
||||
api.addFiles('both/schema.js', [ 'client', 'server' ]);
|
||||
|
||||
api.addFiles('both/collections.js', ['client', 'server']);
|
||||
api.addFiles('both/schema.js', ['client', 'server']);
|
||||
api.addFiles('both/lib/getCurrentServer.js', ['client', 'server']);
|
||||
|
||||
// Client collections and subscriptions
|
||||
api.addFiles('client/collections/subscriptions.js', 'client');
|
||||
|
||||
// Components
|
||||
api.addFiles('client/components/worklist.html', 'client');
|
||||
api.addFiles('client/components/worklist.js', 'client');
|
||||
@@ -80,7 +85,24 @@ Package.onUse(function (api) {
|
||||
api.addFiles('client/components/seriesDetailsTable/seriesDetailsTable.html', 'client');
|
||||
api.addFiles('client/components/seriesDetailsTable/seriesDetailsTable.styl', 'client');
|
||||
api.addFiles('client/components/seriesDetailsTable/seriesDetailsTable.js', 'client');
|
||||
|
||||
|
||||
api.addFiles('client/components/serverInformation/serverInformationDicomWeb/serverInformationDicomWeb.html', 'client');
|
||||
api.addFiles('client/components/serverInformation/serverInformationDicomWeb/serverInformationDicomWeb.js', 'client');
|
||||
|
||||
api.addFiles('client/components/serverInformation/serverInformationDimse/serverInformationDimse.html', 'client');
|
||||
api.addFiles('client/components/serverInformation/serverInformationDimse/serverInformationDimse.js', 'client');
|
||||
|
||||
api.addFiles('client/components/serverInformation/serverInformationForm/serverInformationForm.html', 'client');
|
||||
api.addFiles('client/components/serverInformation/serverInformationForm/serverInformationForm.js', 'client');
|
||||
api.addFiles('client/components/serverInformation/serverInformationForm/serverInformationFormField.html', 'client');
|
||||
|
||||
api.addFiles('client/components/serverInformation/serverInformationList/serverInformationList.html', 'client');
|
||||
api.addFiles('client/components/serverInformation/serverInformationList/serverInformationList.js', 'client');
|
||||
|
||||
api.addFiles('client/components/serverInformation/serverInformationModal/serverInformationModal.html', 'client');
|
||||
api.addFiles('client/components/serverInformation/serverInformationModal/serverInformationModal.styl', 'client');
|
||||
api.addFiles('client/components/serverInformation/serverInformationModal/serverInformationModal.js', 'client');
|
||||
|
||||
// Client-side library functions
|
||||
api.addFiles('client/lib/getStudyMetadata.js', 'client');
|
||||
api.addFiles('client/lib/getStudiesMetadata.js', 'client');
|
||||
@@ -95,6 +117,7 @@ Package.onUse(function (api) {
|
||||
// Server-side functions
|
||||
api.addFiles('server/publications.js', 'server');
|
||||
api.addFiles('server/validateServerConfiguration.js', 'server');
|
||||
api.addFiles('server/servers.js', 'server');
|
||||
api.addFiles('server/lib/remoteGetValue.js', 'server');
|
||||
api.addFiles('server/lib/encodeQueryData.js', 'server');
|
||||
|
||||
@@ -113,12 +136,20 @@ Package.onUse(function (api) {
|
||||
api.addFiles('server/services/dimse/instances.js', 'server');
|
||||
api.addFiles('server/services/dimse/studies.js', 'server');
|
||||
api.addFiles('server/services/dimse/retrieveMetadata.js', 'server');
|
||||
api.addFiles('server/services/dimse/setup.js', 'server');
|
||||
|
||||
// Study, instance, and metadata retrieval from remote PACS via Orthanc as a proxy
|
||||
api.addFiles('server/services/remote/instances.js', 'server');
|
||||
api.addFiles('server/services/remote/studies.js', 'server');
|
||||
api.addFiles('server/services/remote/retrieveMetadata.js', 'server');
|
||||
|
||||
// Export Servers and CurrentServer Collections
|
||||
api.export('Servers', ['client', 'server']);
|
||||
api.export('CurrentServer', ['client', 'server']);
|
||||
|
||||
// Export shared lib functions
|
||||
api.export('getCurrentServer', ['client', 'server']);
|
||||
|
||||
api.export('Services', 'server');
|
||||
|
||||
// Export Worklist helper functions for usage in Routes
|
||||
@@ -136,4 +167,4 @@ Package.onUse(function (api) {
|
||||
api.export('WorklistTabs', 'client');
|
||||
api.export('WorklistStudies', 'client');
|
||||
api.export('WorklistSelectedStudies', 'client')
|
||||
});
|
||||
});
|
||||
@@ -6,16 +6,17 @@ Meteor.methods({
|
||||
GetStudyMetadata: function(studyInstanceUid) {
|
||||
log.info('GetStudyMetadata(%s)', studyInstanceUid);
|
||||
|
||||
if (!Meteor.settings.servers.dicomWeb) {
|
||||
throw 'No properly configured server was available over DICOMWeb';
|
||||
// Get the server data. This is user-defined in the config.json files or through servers
|
||||
// configuration modal
|
||||
const server = getCurrentServer();
|
||||
|
||||
if (!server) {
|
||||
throw 'No properly configured server was available over DICOMWeb or DIMSE.';
|
||||
}
|
||||
|
||||
if (Meteor.settings.servers.dicomWeb && Meteor.settings.defaultServiceType === 'dicomWeb') {
|
||||
// Get the server data. This is user-defined in the
|
||||
// config.json files used to run the Meteor server
|
||||
var server = Meteor.settings.servers.dicomWeb[0];
|
||||
if (server.type === 'dicomWeb') {
|
||||
return Services.WADO.RetrieveMetadata(server, studyInstanceUid);
|
||||
} else if (Meteor.settings.servers.dimse && Meteor.settings.defaultServiceType === 'dimse') {
|
||||
} else if (server.type === 'dimse') {
|
||||
return Services.DIMSE.RetrieveMetadata(studyInstanceUid);
|
||||
}
|
||||
}
|
||||
|
||||
@@ -39,7 +39,8 @@ Meteor.methods({
|
||||
* @returns {boolean}
|
||||
*/
|
||||
importSupported: function() {
|
||||
if (Meteor.settings.servers.dimse && Meteor.settings.defaultServiceType === 'dimse') {
|
||||
const server = getCurrentServer();
|
||||
if (server && server.type === 'dimse') {
|
||||
return true;
|
||||
}
|
||||
},
|
||||
@@ -53,13 +54,17 @@ Meteor.methods({
|
||||
return;
|
||||
}
|
||||
|
||||
if (Meteor.settings.servers.dicomWeb && Meteor.settings.defaultServiceType === 'dicomWeb') {
|
||||
const server = getCurrentServer();
|
||||
|
||||
if (!server) {
|
||||
throw 'No properly configured server was available over DICOMWeb or DIMSE.';
|
||||
}
|
||||
|
||||
if (server.type === 'dicomWeb') {
|
||||
//TODO: Support importing studies into dicomWeb
|
||||
console.log('Importing studies into dicomWeb is currently not supported.');
|
||||
} else if (Meteor.settings.servers.dimse && Meteor.settings.defaultServiceType === 'dimse') {
|
||||
} else if (server.type === 'dimse') {
|
||||
importStudiesDIMSE(studiesToImport, studyImportStatusId);
|
||||
} else {
|
||||
throw 'No properly configured server was available over DICOMWeb or DIMSE.';
|
||||
}
|
||||
},
|
||||
/**
|
||||
|
||||
@@ -1,19 +1,22 @@
|
||||
Meteor.methods({
|
||||
/**
|
||||
* Use the specified filter to conduct a search from the DICOM server
|
||||
*
|
||||
* @param filter
|
||||
*/
|
||||
WorklistSearch: function(filter) {
|
||||
if (Meteor.settings.servers.dicomWeb && Meteor.settings.defaultServiceType === 'dicomWeb') {
|
||||
// Get the server data. This is user-defined in the
|
||||
// config.json files used to run the Meteor server
|
||||
var server = Meteor.settings.servers.dicomWeb[0];
|
||||
WorklistSearch(filter) {
|
||||
// Get the server data. This is user-defined in the config.json files or through servers
|
||||
// configuration modal
|
||||
const server = getCurrentServer();
|
||||
|
||||
return Services.QIDO.Studies(server, filter);
|
||||
} else if (Meteor.settings.servers.dimse && Meteor.settings.defaultServiceType === 'dimse') {
|
||||
return Services.DIMSE.Studies(filter);
|
||||
} else {
|
||||
if (!server) {
|
||||
throw 'No properly configured server was available over DICOMWeb or DIMSE.';
|
||||
}
|
||||
|
||||
if (server.type === 'dicomWeb') {
|
||||
return Services.QIDO.Studies(server, filter);
|
||||
} else if (server.type === 'dimse') {
|
||||
return Services.DIMSE.Studies(filter);
|
||||
}
|
||||
}
|
||||
});
|
||||
@@ -1,3 +1,11 @@
|
||||
Meteor.publish('studyImportStatus', () => {
|
||||
return StudyImportStatus.find();
|
||||
});
|
||||
});
|
||||
|
||||
Meteor.publish('servers', () => {
|
||||
return Servers.find();
|
||||
});
|
||||
|
||||
Meteor.publish('currentServer', () => {
|
||||
return CurrentServer.find();
|
||||
});
|
||||
@@ -0,0 +1,92 @@
|
||||
import { Meteor } from 'meteor/meteor';
|
||||
|
||||
Meteor.startup(function() {
|
||||
Servers.remove({
|
||||
origin: 'json'
|
||||
});
|
||||
|
||||
_.each(Meteor.settings.servers, function(endpoints, serverType) {
|
||||
_.each(endpoints, function(endpoint) {
|
||||
var server = _.clone(endpoint);
|
||||
server.origin = 'json';
|
||||
server.type = serverType;
|
||||
Servers.insert(server);
|
||||
});
|
||||
});
|
||||
|
||||
ServersControl.resetCurrentServer();
|
||||
});
|
||||
|
||||
class ServersControl {
|
||||
|
||||
static writeCallback(error, affected) {
|
||||
if (error) {
|
||||
throw new Meteor.Error('data-write', error);
|
||||
}
|
||||
}
|
||||
|
||||
static resetCurrentServer() {
|
||||
const currentServer = CurrentServer.findOne();
|
||||
if (currentServer && Servers.find({ _id: currentServer.serverId }).count()) {
|
||||
return;
|
||||
}
|
||||
|
||||
const newServer = Servers.findOne({
|
||||
origin: 'json',
|
||||
type: Meteor.settings.defaultServiceType || 'dicomWeb'
|
||||
});
|
||||
|
||||
if (newServer) {
|
||||
CurrentServer.remove({});
|
||||
CurrentServer.insert({
|
||||
serverId: newServer._id
|
||||
});
|
||||
}
|
||||
}
|
||||
|
||||
static find(query) {
|
||||
return Servers.find(query).fetch();
|
||||
}
|
||||
|
||||
static save(serverSettings) {
|
||||
const query = {
|
||||
_id: serverSettings._id
|
||||
};
|
||||
const options = {
|
||||
upsert: true
|
||||
};
|
||||
|
||||
if (!serverSettings._id) {
|
||||
delete serverSettings._id;
|
||||
}
|
||||
|
||||
return Servers.update(query, serverSettings, options, this.writeCallback);
|
||||
}
|
||||
|
||||
static setActive(serverId) {
|
||||
CurrentServer.remove({});
|
||||
CurrentServer.insert({
|
||||
serverId: serverId
|
||||
});
|
||||
}
|
||||
|
||||
static remove(serverId) {
|
||||
var query = {
|
||||
_id: serverId
|
||||
};
|
||||
|
||||
const removeStatus = Servers.remove(query, this.writeCallback);
|
||||
|
||||
ServersControl.resetCurrentServer();
|
||||
|
||||
return removeStatus;
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
Meteor.methods({
|
||||
serverFind: query => ServersControl.find(query),
|
||||
serverSave: serverSettings => ServersControl.save(serverSettings),
|
||||
serverSetActive: serverId => ServersControl.setActive(serverId),
|
||||
serverRemove: serverId => ServersControl.remove(serverId)
|
||||
});
|
||||
@@ -1,68 +1,66 @@
|
||||
/**
|
||||
* Parses data returned from a study search and transforms it into
|
||||
* an array of series that are present in the study
|
||||
*
|
||||
* @param resultData
|
||||
* @returns {Array} Series List
|
||||
*/
|
||||
function resultDataToStudyMetadata(resultData) {
|
||||
var seriesMap = {};
|
||||
var seriesList = [];
|
||||
|
||||
resultData.forEach(function(instanceRaw) {
|
||||
var instance = instanceRaw.toObject();
|
||||
// Use seriesMap to cache series data
|
||||
// If the series instance UID has already been used to
|
||||
// process series data, continue using that series
|
||||
var seriesInstanceUid = instance[0x0020000E];
|
||||
var series = seriesMap[seriesInstanceUid];
|
||||
|
||||
// If no series data exists in the seriesMap cache variable,
|
||||
// process any available series data
|
||||
if (!series) {
|
||||
series = {
|
||||
seriesInstanceUid: seriesInstanceUid,
|
||||
seriesNumber: instance[0x00200011],
|
||||
instances: []
|
||||
};
|
||||
|
||||
// Save this data in the seriesMap cache variable
|
||||
seriesMap[seriesInstanceUid] = series;
|
||||
seriesList.push(series);
|
||||
}
|
||||
|
||||
// TODO: [custom-servers] Check which peer it should point to
|
||||
var server = Meteor.settings.servers.dimse[0].peers[0];
|
||||
var host = Meteor.settings.servers.dimse.host,
|
||||
port = Meteor.settings.servers.dimse.port;
|
||||
|
||||
var serverRoot = host + ':' + port;
|
||||
|
||||
var sopInstanceUid = instance[0x00080018];
|
||||
var uri = serverRoot + '/studies/' + studyInstanceUid + '/series/' + seriesInstanceUid + '/instances/' + sopInstanceUid + '/frames/1';
|
||||
|
||||
// Add this instance to the current series
|
||||
series.instances.push({
|
||||
sopClassUid: instance[0x00080016],
|
||||
sopInstanceUid: sopInstanceUid,
|
||||
uri: uri,
|
||||
instanceNumber: instance[0x00200013]
|
||||
});
|
||||
});
|
||||
return seriesList;
|
||||
}
|
||||
|
||||
/**
|
||||
* Retrieve a set of instances using a DIMSE call
|
||||
* @param studyInstanceUid
|
||||
* @returns {{wadoUriRoot: String, studyInstanceUid: String, seriesList: Array}}
|
||||
*/
|
||||
Services.DIMSE.Instances = function(studyInstanceUid) {
|
||||
//var url = buildUrl(server, studyInstanceUid);
|
||||
var result = DIMSE.retrieveInstances(studyInstanceUid);
|
||||
|
||||
return {
|
||||
studyInstanceUid: studyInstanceUid,
|
||||
seriesList: resultDataToStudyMetadata(result)
|
||||
};
|
||||
};
|
||||
/**
|
||||
* Parses data returned from a study search and transforms it into
|
||||
* an array of series that are present in the study
|
||||
*
|
||||
* @param resultData
|
||||
* @returns {Array} Series List
|
||||
*/
|
||||
function resultDataToStudyMetadata(resultData) {
|
||||
var seriesMap = {};
|
||||
var seriesList = [];
|
||||
|
||||
resultData.forEach(function(instanceRaw) {
|
||||
var instance = instanceRaw.toObject();
|
||||
// Use seriesMap to cache series data
|
||||
// If the series instance UID has already been used to
|
||||
// process series data, continue using that series
|
||||
var seriesInstanceUid = instance[0x0020000E];
|
||||
var series = seriesMap[seriesInstanceUid];
|
||||
|
||||
// If no series data exists in the seriesMap cache variable,
|
||||
// process any available series data
|
||||
if (!series) {
|
||||
series = {
|
||||
seriesInstanceUid: seriesInstanceUid,
|
||||
seriesNumber: instance[0x00200011],
|
||||
instances: []
|
||||
};
|
||||
|
||||
// Save this data in the seriesMap cache variable
|
||||
seriesMap[seriesInstanceUid] = series;
|
||||
seriesList.push(series);
|
||||
}
|
||||
|
||||
// TODO: Check which peer it should point to
|
||||
var server = getCurrentServer().peers[0];
|
||||
|
||||
var serverRoot = server.host + ':' + server.port;
|
||||
|
||||
var sopInstanceUid = instance[0x00080018];
|
||||
var uri = serverRoot + '/studies/' + studyInstanceUid + '/series/' + seriesInstanceUid + '/instances/' + sopInstanceUid + '/frames/1';
|
||||
|
||||
// Add this instance to the current series
|
||||
series.instances.push({
|
||||
sopClassUid: instance[0x00080016],
|
||||
sopInstanceUid: sopInstanceUid,
|
||||
uri: uri,
|
||||
instanceNumber: instance[0x00200013]
|
||||
});
|
||||
});
|
||||
return seriesList;
|
||||
}
|
||||
|
||||
/**
|
||||
* Retrieve a set of instances using a DIMSE call
|
||||
* @param studyInstanceUid
|
||||
* @returns {{wadoUriRoot: String, studyInstanceUid: String, seriesList: Array}}
|
||||
*/
|
||||
Services.DIMSE.Instances = function(studyInstanceUid) {
|
||||
//var url = buildUrl(server, studyInstanceUid);
|
||||
var result = DIMSE.retrieveInstances(studyInstanceUid);
|
||||
|
||||
return {
|
||||
studyInstanceUid: studyInstanceUid,
|
||||
seriesList: resultDataToStudyMetadata(result)
|
||||
};
|
||||
};
|
||||
@@ -110,8 +110,8 @@ function resultDataToStudyMetadata(studyInstanceUid, resultData) {
|
||||
};
|
||||
|
||||
// Retrieve the actual data over WADO-URI
|
||||
var server = Meteor.settings.servers.dicomWeb[0];
|
||||
instanceSummary.wadouri = WADOProxy.convertURL(server.wadoUriRoot + '?requestType=WADO&studyUID=' + studyInstanceUid + '&seriesUID=' + seriesInstanceUid + '&objectUID=' + sopInstanceUid + "&contentType=application%2Fdicom", server.requestOptions);
|
||||
var server = getCurrentServer();
|
||||
instanceSummary.wadouri = WADOProxy.convertURL(server.wadoUriRoot + '?requestType=WADO&studyUID=' + studyInstanceUid + '&seriesUID=' + seriesInstanceUid + '&objectUID=' + sopInstanceUid + '&contentType=application%2Fdicom', server.requestOptions);
|
||||
|
||||
series.instances.push(instanceSummary);
|
||||
});
|
||||
@@ -127,8 +127,8 @@ function resultDataToStudyMetadata(studyInstanceUid, resultData) {
|
||||
* @returns {{seriesList: Array, patientName: *, patientId: *, accessionNumber: *, studyDate: *, modalities: *, studyDescription: *, imageCount: *, studyInstanceUid: *}}
|
||||
*/
|
||||
Services.DIMSE.RetrieveMetadata = function(studyInstanceUid) {
|
||||
// TODO: Find active server
|
||||
const activeServer = Meteor.settings.servers.dimse[0].peers[0];
|
||||
// TODO: Check which peer it should point to
|
||||
const activeServer = getCurrentServer().peers[0];
|
||||
const supportsInstanceRetrievalByStudyUid = activeServer.supportsInstanceRetrievalByStudyUid;
|
||||
let results;
|
||||
|
||||
|
||||
@@ -0,0 +1,38 @@
|
||||
import { Meteor } from 'meteor/meteor';
|
||||
|
||||
const setupDIMSE = () => {
|
||||
// Terminate existing DIMSE servers and sockets and clean up the connection object
|
||||
DIMSE.connection.reset();
|
||||
|
||||
// Get the new server configuration
|
||||
const server = getCurrentServer();
|
||||
|
||||
// Stop here if the new server is not of DIMSE type
|
||||
if (server.type !== 'dimse') {
|
||||
return;
|
||||
}
|
||||
|
||||
// Check if peers were defined in the server configuration and throw an error if not
|
||||
const peers = server.peers;
|
||||
if (!peers || !peers.length) {
|
||||
console.error('dimse-config: ' + 'No DIMSE Peers provided.');
|
||||
throw new Meteor.Error('dimse-config', 'No DIMSE Peers provided.');
|
||||
}
|
||||
|
||||
// Add all the DIMSE peers, establishing the connections
|
||||
console.log('Adding DIMSE peers');
|
||||
try {
|
||||
peers.forEach(peer => DIMSE.connection.addPeer(peer));
|
||||
} catch(error) {
|
||||
console.error('dimse-addPeers: ' + error);
|
||||
throw new Meteor.Error('dimse-addPeers', error);
|
||||
}
|
||||
};
|
||||
|
||||
// Setup the DIMSE connections on startup or when the current server is changed
|
||||
Meteor.startup(() => {
|
||||
CurrentServer.find().observe({
|
||||
added: setupDIMSE,
|
||||
changed: setupDIMSE
|
||||
});
|
||||
});
|
||||
Reference in new issue
Block a user