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fix: Use newer ONNX version and load without errors (#5854)

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* fix: Use newer ONNX version and load without errors

* Only changes to enable SAM again

* fix(seg hydration): auto-hydrate RT struct on second load with disableConfirmationPrompts (#5875)

* chore(version): Update package versions to 3.13.0-beta.34 [skip ci]

* fix(Threshold tool): Threshold tool no longer becomes deselected when the Dynamic option is selected (#5884)

fix(Threshold tool): Added 'ThresholdCircularBrushDynamic' to the toolNames array so the evaluator correctly recognizes it as an active state for the Threshold button when Dynamic mode is selected.

* chore(version): Update package versions to 3.13.0-beta.35 [skip ci]

* fix: Modalities in study list should select starts with as primary (#5886)

* chore(version): Update package versions to 3.13.0-beta.36 [skip ci]

* fix(security): Bump tar version to address CVE-2026-31802. (#5893)

* chore(version): Update package versions to 3.13.0-beta.37 [skip ci]

* fix(segmentation): Display "No description S:{series number} {modality}" for segmentations with no label. (#5874)

* Bump CS3D dependency to get the fallbackLabel field additions.

* chore(version): Update package versions to 3.13.0-beta.38 [skip ci]

* fix(window level): The window level value is not displayed by default on all the viewports when selecting common/custom layout and TMTV. (#5865)

* fix(window level): Set up listener for viewport availability such that the initial window level can be read and displayed.

* PR feedback.

* PR feedback.

---------

Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>

* chore(version): Update package versions to 3.13.0-beta.39 [skip ci]

* fix(security): Bump flattened version to address CVE-2026-32141. (#5897)

* chore(version): Update package versions to 3.13.0-beta.40 [skip ci]

* fix(sr-hydration): enable hydration and arrow navigation for 3D SR measurements (#5887)

Joe is away, so approving based on the code having the requested change, and otherwise looking good/passing tests.

* fix(sr-hydration): enable hydration and arrows navigation for 3D SR measurements

* test: add automated test for SR measurement navigation with arrows after hydration

* add cross-study warning in the 3D branch

* test: address reviewer feedback for the test

* fix: support 3D and 2D annotations for SR hydration

* test: improve navigation to first image

---------

Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>

* chore(version): Update package versions to 3.13.0-beta.41 [skip ci]

* feat: Add combined build (#5895)

* Add combined build

* Link script location update

* Security and validation fixes

* Allow specifying target path in PR description

* fix: Version match

* Fix build detection issue

* fix: Playwright deploy

* Separate out the branch merge guard

* Update docs and link info

* test: Update the layout change to wait for network idle

* Move audit late so the rest of the build can be worked on

* Add text with network check to ensure we see this change is updated

* Attempt to fix the mpr loading on ohif-downstream

* PR review comments

* Update docs

* Update to CS3D 4.20.0

* PR comments

* Add log on ohif-integration builds

* Update build test

* Removed unused space to kickoff build

* chore(version): Update package versions to 3.13.0-beta.42 [skip ci]

* fix(SR): Added support for spline and live wire SR items. (#5870)

* fix(SR): Added support for spline and live wire SR items.

* Apply suggestion from @greptile-apps[bot]

Co-authored-by: greptile-apps[bot] <165735046+greptile-apps[bot]@users.noreply.github.com>

* Add a script to checkout a worktree for test builds

* fix: Allow download for testing sr validator

* Remove script that wasn't intended to be included

* Bump CS3D version.

* PR comments - simplify code and use single codepath for download

* Allow both download and save buttons for SEG and RTSTRUCT

---------

Co-authored-by: greptile-apps[bot] <165735046+greptile-apps[bot]@users.noreply.github.com>
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>

* chore(version): Update package versions to 3.13.0-beta.43 [skip ci]

* chore(tests): contour segment interactions e2e tests - rename and togglevisibility (#5891)

* chore(version): Update package versions to 3.13.0-beta.44 [skip ci]

* chore(refactor): use public appConfig getter instead of private _appConfig field (#5923)

* chore(version): Update package versions to 3.13.0-beta.45 [skip ci]

* refactor(tests): update viewport page object usage to async and update all effected tests (#5927)

* chore(version): Update package versions to 3.13.0-beta.46 [skip ci]

* fix: prevent black viewport when navigating series with client-created segmentation (#5919)

* chore(version): Update package versions to 3.13.0-beta.47 [skip ci]

* fix(measurement): Restore viewport interactivity when deleting in-progress Spline or Livewire measurement (#5905)

* chore(version): Update package versions to 3.13.0-beta.48 [skip ci]

* fix(segmentation): restrict overlay segmentation menu to same frame of reference as viewport background display set  (#5900)

- Add FrameOfReferenceUID to SEG and RTSTRUCT displaySet in SOP Class Handlers so the FOR is available for filtering
- Sync optimisticOverlayDisplaySets when background display set changes so the overlay menu reflects the correct state after a background switch
- Add FOR matching guard to the hydrate segmentation synchronizer to prevent the hydration synchronizer from blindly mirroring segmentations from a source viewport to a target viewport if their primary Frames of Reference do not align.
- fix segmentation overlay order reversal on viewport re-render

* chore(version): Update package versions to 3.13.0-beta.49 [skip ci]

* fix(security): update dependencies to fix security vulnerabilities (#5936)

* chore(version): Update package versions to 3.13.0-beta.50 [skip ci]

* fix(security): Update yarn.lock that was missed in PR #5936. (#5940)

* chore(version): Update package versions to 3.13.0-beta.51 [skip ci]

* feat(component): Adds SmartScrollbar to ui-next - OHIF-2558 (#5924)

Co-authored-by: Joe Boccanfuso <joe.boccanfuso@radicalimaging.com>

* fix(defaultRouteInit): pass sorted display sets to hanging protocol for deterministic viewport order (#5933)

fix: pass sorted display sets to hanging protocol for deterministic viewport order

The `applyHangingProtocol` function already sorts display sets by modality
priority and series number into `sortedDisplaySets`, but the unsorted
`displaySets` array was being passed to `hangingProtocolService.run()`.

This caused non-deterministic viewport ordering across page loads because
`displaySetService.getActiveDisplaySets()` returns display sets in creation
order, which depends on asynchronous network responses.

Made-with: Cursor

* chore(version): Update package versions to 3.13.0-beta.52 [skip ci]

* revert: rename DisplaySet.frameOfReferenceUID back to FrameOfReferenceUID (#5943)

* chore(version): Update package versions to 3.13.0-beta.53 [skip ci]

* fix(cornerstone): read FrameOfReferenceUID from display set in viewport service (#5950)

* chore(version): Update package versions to 3.13.0-beta.54 [skip ci]

* fix: ignore auth in git (#5955)

* chore(version): Update package versions to 3.13.0-beta.55 [skip ci]

* ONNX latest version

* chore(version): Update package versions to 3.13.0-beta.56 [skip ci]

* bun lock

* fix high sev mathjs issue

* Revert onnx changes

* Update to recent CS3D version

* Undo unneeded change

* Add null check

* Undo unneeded change

---------

Co-authored-by: Ghadeer Albattarni <165973963+GhadeerAlbattarni@users.noreply.github.com>
Co-authored-by: ohif-bot <danny.ri.brown+ohif-bot@gmail.com>
Co-authored-by: Joe Boccanfuso <109477394+jbocce@users.noreply.github.com>
Co-authored-by: greptile-apps[bot] <165735046+greptile-apps[bot]@users.noreply.github.com>
Co-authored-by: diattamo <mmddiatta@gmail.com>
Co-authored-by: Pedro Köhler <pedrokohlerbh@gmail.com>
Co-authored-by: Dan Rukas <dan.rukas@gmail.com>
Co-authored-by: Joe Boccanfuso <joe.boccanfuso@radicalimaging.com>
Co-authored-by: Alireza <ar.sedghi@gmail.com>
This commit is contained in:
Bill WallaceGhadeer Albattarniohif-botJoe Boccanfusogreptile-apps[bot]diattamoPedro KöhlerDan RukasJoe BoccanfusoAlireza
 authored and GitHub committed 2026-04-15 12:04:00 -04:00
1 parent 31727c0668
commit cc5dc20164
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