From e354c6c577f515a6f8479f227f0aaa9ddce025bf Mon Sep 17 00:00:00 2001
From: Erik Ziegler <erik.ziegler@ulg.ac.be>
Date: Sun, 14 Feb 2016 15:13:08 +0100
Subject: [PATCH] Steps toward converting targets to non-targets

---
 .../lesionLocationDialog.html                 |  1 +
 .../lesionLocationDialog.js                   |  8 ++
 .../lesiontracker/lib/convertToNonTarget.js   | 86 +++++++++++++++++++
 Packages/lesiontracker/package.js             |  2 +
 4 files changed, 97 insertions(+)
 create mode 100644 Packages/lesiontracker/lib/convertToNonTarget.js

diff --git a/Packages/lesiontracker/client/components/lesionLocationDialog/lesionLocationDialog.html b/Packages/lesiontracker/client/components/lesionLocationDialog/lesionLocationDialog.html
index c4288714a..32de9ec10 100644
--- a/Packages/lesiontracker/client/components/lesionLocationDialog/lesionLocationDialog.html
+++ b/Packages/lesiontracker/client/components/lesionLocationDialog/lesionLocationDialog.html
@@ -32,6 +32,7 @@
                 </select>
             </div>
             <button id="removeLesion" class="btn btn-link">Remove</button>
+            <button id="convertToNonTarget" class="btn btn-link">Convert to Non-Target</button>
         </div>
     </div>
 </template>
\ No newline at end of file
diff --git a/Packages/lesiontracker/client/components/lesionLocationDialog/lesionLocationDialog.js b/Packages/lesiontracker/client/components/lesionLocationDialog/lesionLocationDialog.js
index 5a1058972..1e0789eab 100644
--- a/Packages/lesiontracker/client/components/lesionLocationDialog/lesionLocationDialog.js
+++ b/Packages/lesiontracker/client/components/lesionLocationDialog/lesionLocationDialog.js
@@ -258,6 +258,14 @@ Template.lesionLocationDialog.events({
 
         closeHandler(dialog);
     },
+    'click #convertToNonTarget': function() {
+        var measurementData = Template.lesionLocationDialog.measurementData;
+        var dialog = Template.lesionLocationDialog.dialog;
+
+        convertToNonTarget(measurementData);
+
+        closeHandler(dialog);
+    },
     'click #btnCloseLesionPopup': function() {
         var dialog = Template.lesionLocationDialog.dialog;
         closeHandler(dialog);
diff --git a/Packages/lesiontracker/lib/convertToNonTarget.js b/Packages/lesiontracker/lib/convertToNonTarget.js
new file mode 100644
index 000000000..4d574e8be
--- /dev/null
+++ b/Packages/lesiontracker/lib/convertToNonTarget.js
@@ -0,0 +1,86 @@
+convertToNonTarget = function(measurementData) {
+    if (measurementData.isTarget === false) {
+        return;
+    }
+
+    var measurement = Measurements.findOne(measurementData.id);
+
+    var timepoint = Timepoints.findOne({
+        timepointId: measurementData.timepointId
+    });
+
+    // Next, update the measurementData and add it to the new tool type
+    var toolType = 'nonTarget';
+    var newMeasurement = {
+        id: 'notready',
+        lesionNumber: LesionManager.getNewLesionNumber(measurementData.timepointId, false),
+        visible: true,
+        active: true,
+        imageId: measurementData.imageId,
+        seriesInstanceUid: measurementData.seriesInstanceUid,
+        studyInstanceUid: measurementData.studyInstanceUid,
+        patientId: measurementData.patientId,
+        isTarget: false,
+        measurementType: toolType
+    };
+
+    if (timepoint && timepoint.timepointType === 'baseline') {
+        newMeasurement.response = 'NM';
+    } else if (timepoint && timepoint.timepointType === 'followup') {
+        newMeasurement.response = 'Present';
+    } else {
+        newMeasurement.response = '';
+    }
+
+    newMeasurement.handles = {
+        start: {
+            x: (measurementData.handles.start.x + measurementData.handles.end.x) / 2,
+            y: (measurementData.handles.start.y + measurementData.handles.end.y) / 2,
+            highlight: true,
+            active: false
+        },
+        end: {
+            x: Math.min(measurementData.handles.start.x, measurementData.handles.end.x),
+            y: Math.min(measurementData.handles.start.y, measurementData.handles.end.y),
+            highlight: true,
+            active: false
+        },
+        textBox: {
+            x: measurementData.handles.textBox.x,
+            y: measurementData.handles.textBox.y,
+            active: false,
+            movesIndependently: false,
+            drawnIndependently: true,
+            allowedOutsideImage: true,
+            hasBoundingBox: true
+        }
+    };
+
+    // Adds lesion data to timepoints array
+    LesionManager.updateLesionData(newMeasurement);
+
+    // Set the new Measurement to have the same location as the old one
+    if (measurement.location && measurement.locationId) {
+        var existingMeasurement = Measurements.findOne({
+            lesionNumber: newMeasurement.lesionNumber,
+            isTarget: newMeasurement.isTarget
+        });
+
+        if (!existingMeasurement) {
+            return;
+        }
+
+        Measurements.update(existingMeasurement._id, {
+            $set: {
+                location: measurement.location,
+                locationId: measurement.locationId
+            }
+        });
+    }
+
+    if (measurement) {
+        // Remove the timepointData from this Measurement and update it
+        // in the database, if it is already in the database
+        clearMeasurementTimepointData(measurement._id, measurementData.timepointId);
+    }
+};
diff --git a/Packages/lesiontracker/package.js b/Packages/lesiontracker/package.js
index c67a6aaf1..420c50ce8 100644
--- a/Packages/lesiontracker/package.js
+++ b/Packages/lesiontracker/package.js
@@ -144,6 +144,7 @@ Package.onUse(function(api) {
     api.addFiles('lib/deactivateAllToolData.js', 'client');
     api.addFiles('lib/clearTools.js', 'client');
     api.addFiles('lib/calculateTotalLesionBurden.js', 'client');
+    api.addFiles('lib/convertToNonTarget.js', 'client');
 
     api.addFiles('lib/syncMeasurementAndToolData.js', 'client');
     api.addFiles('lib/syncImageMeasurementAndToolData.js', 'client');
@@ -174,6 +175,7 @@ Package.onUse(function(api) {
     api.export('getTimepointName', 'client');
     api.export('getTrialCriteriaConstraints', 'client');
     api.export('calculateTotalLesionBurden', 'client');
+    api.export('convertToNonTarget', 'client');
 
     // Export global objects
     api.export('TrialResponseCriteria', 'client');