ohif-viewer/extensions/dicom-sr/src/OHIFCornerstoneSRViewport.js
Danny Brown 2a51d75f77
[OHIF-339] - workflow changes (#1931)
* workflow changes

* Cherry pick OHIF-310 into this PR.

* fix label bug and dead code

* remove comment

* Wire up CreateReportButton

* fix additionalFindingTypes + save interaction

* Remove unused createReportAsync call

* stub for report hydration prompt

* Update PR

* Remove debuggers

* push updated code

* Push updates

* push

* fix sidebar save

* enable tracking of new study or series

* fix for duplicate created report series in sidebard

* fix for unexpected viewport dialog after visiting study list then a new study

* Fix for hydration not marking multiple series as active

* Reviewer changes.

* Respond to final review comment, add series description setting for export.

Co-authored-by: James A. Petts <jamesapetts@gmail.com>
2020-08-04 10:11:23 +01:00

462 lines
13 KiB
JavaScript

import React, { useCallback, useContext, useEffect, useState } from 'react';
import PropTypes from 'prop-types';
import cornerstoneTools from 'cornerstone-tools';
import cornerstone from 'cornerstone-core';
import CornerstoneViewport from 'react-cornerstone-viewport';
import OHIF, { DicomMetadataStore, utils } from '@ohif/core';
import {
Notification,
ViewportActionBar,
useViewportGrid,
useViewportDialog,
} from '@ohif/ui';
import TOOL_NAMES from './constants/toolNames';
import { adapters } from 'dcmjs';
// import getToolStateToCornerstoneMeasurementSchema from './utils/getToolStateToCornerstoneMeasurementSchema';
import id from './id';
const { formatDate } = utils;
const scrollToIndex = cornerstoneTools.importInternal('util/scrollToIndex');
const globalImageIdSpecificToolStateManager =
cornerstoneTools.globalImageIdSpecificToolStateManager;
const { StackManager, guid } = OHIF.utils;
const MEASUREMENT_TRACKING_EXTENSION_ID = 'org.ohif.measurement-tracking';
function OHIFCornerstoneSRViewport({
children,
dataSource,
displaySet,
viewportIndex,
servicesManager,
extensionManager,
}) {
const { DisplaySetService, MeasurementService } = servicesManager.services;
const [viewportGrid, viewportGridService] = useViewportGrid();
const [viewportDialogState, viewportDialogApi] = useViewportDialog();
const [measurementSelected, setMeasurementSelected] = useState(0);
const [measurementCount, setMeasurementCount] = useState(1);
const [viewportData, setViewportData] = useState(null);
const [activeDisplaySetData, setActiveDisplaySetData] = useState({});
const [element, setElement] = useState(null);
const [isHydrated, setIsHydrated] = useState(displaySet.isHydrated);
const { viewports, activeViewportIndex } = viewportGrid;
// Optional hook into tracking extension, if present.
let trackedMeasurements;
let sendTrackedMeasurementsEvent;
if (
extensionManager.registeredExtensionIds.includes(
MEASUREMENT_TRACKING_EXTENSION_ID
)
) {
const contextModule = extensionManager.getModuleEntry(
'org.ohif.measurement-tracking.contextModule.TrackedMeasurementsContext'
);
const useTrackedMeasurements = () => useContext(contextModule.context);
[
trackedMeasurements,
sendTrackedMeasurementsEvent,
] = useTrackedMeasurements();
}
const onElementEnabled = evt => {
const eventData = evt.detail;
const targetElement = eventData.element;
// TODO -> This will only be temporary until we set a tool on, and isn't very customizable.
// Need to discuss how to deal with tools in general in the redesign, since we
// Previously just had Tool mode state global across the entire viewer.
const globalTools = cornerstoneTools.store.state.globalTools;
const globalToolNames = Object.keys(globalTools);
globalToolNames.forEach(globalToolName => {
cornerstoneTools.setToolDisabledForElement(targetElement, globalToolName);
});
cornerstoneTools.setToolEnabledForElement(
targetElement,
TOOL_NAMES.DICOM_SR_DISPLAY_TOOL
);
cornerstoneTools.setToolActiveForElement(targetElement, 'PanMultiTouch', {
pointers: 2,
});
cornerstoneTools.setToolActiveForElement(
targetElement,
'ZoomTouchPinch',
{}
);
cornerstoneTools.setToolActiveForElement(targetElement, 'Wwwc', {
mouseButtonMask: 1,
});
cornerstoneTools.setToolActiveForElement(targetElement, 'Pan', {
mouseButtonMask: 4,
});
cornerstoneTools.setToolActiveForElement(targetElement, 'Zoom', {
mouseButtonMask: 2,
});
cornerstoneTools.setToolActiveForElement(
targetElement,
'StackScrollMouseWheel',
{}
);
setTrackingUniqueIdentifiersForElement(targetElement);
setElement(targetElement);
const OHIFCornerstoneEnabledElementEvent = new CustomEvent(
'ohif-cornerstone-enabled-element-event',
{
detail: {
enabledElement: targetElement,
viewportIndex,
},
}
);
document.dispatchEvent(OHIFCornerstoneEnabledElementEvent);
};
useEffect(() => {
if (!displaySet.isLoaded) {
displaySet.load();
}
setIsHydrated(displaySet.isHydrated);
}, [displaySet]);
const setTrackingUniqueIdentifiersForElement = useCallback(targetElement => {
const { measurements } = displaySet;
const srModule = cornerstoneTools.getModule(id);
srModule.setters.trackingUniqueIdentifiersForElement(
targetElement,
measurements.map(measurement => measurement.TrackingUniqueIdentifier),
measurementSelected
);
});
useEffect(() => {
const numMeasurements = displaySet.measurements.length;
setMeasurementCount(numMeasurements);
}, [dataSource, displaySet]);
const updateViewport = useCallback(newMeasurementSelected => {
const {
StudyInstanceUID,
displaySetInstanceUID,
sopClassUids,
} = displaySet;
if (!StudyInstanceUID || !displaySetInstanceUID) {
return;
}
if (sopClassUids && sopClassUids.length > 1) {
console.warn(
'More than one SOPClassUID in the same series is not yet supported.'
);
}
_getViewportAndActiveDisplaySetData(
dataSource,
displaySet,
newMeasurementSelected,
DisplaySetService,
element
).then(({ viewportData, activeDisplaySetData }) => {
setViewportData({ ...viewportData });
setActiveDisplaySetData({ ...activeDisplaySetData });
setMeasurementSelected(newMeasurementSelected);
if (element !== null) {
scrollToIndex(element, viewportData.stack.currentImageIdIndex);
cornerstone.updateImage(element);
}
});
});
useEffect(
() => {
if (element !== null) {
setTrackingUniqueIdentifiersForElement(element);
}
},
// eslint-disable-next-line react-hooks/exhaustive-deps
[dataSource, displaySet]
);
useEffect(
() => {
updateViewport(measurementSelected);
},
// eslint-disable-next-line react-hooks/exhaustive-deps
[dataSource, displaySet, element]
);
const firstViewportIndexWithMatchingDisplaySetUid = viewports.findIndex(
vp => vp.displaySetInstanceUID === displaySet.displaySetInstanceUID
);
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
let childrenWithProps = null;
if (!viewportData) {
return null;
}
const {
imageIds,
currentImageIdIndex,
// If this comes from the instance, would be a better default
// `FrameTime` in the instance
// frameRate = 0,
} = viewportData.stack;
// TODO: Does it make more sense to use Context?
if (children && children.length) {
childrenWithProps = children.map((child, index) => {
return (
child &&
React.cloneElement(child, {
viewportIndex,
key: index,
})
);
});
}
const { Modality } = displaySet;
const {
PatientID,
PatientName,
PatientSex,
PatientAge,
SliceThickness,
ManufacturerModelName,
StudyDate,
SeriesDescription,
SeriesInstanceUID,
PixelSpacing,
SeriesNumber,
displaySetInstanceUID,
} = activeDisplaySetData;
const onMeasurementChange = direction => {
let newMeasurementSelected = measurementSelected;
if (direction === 'right') {
newMeasurementSelected++;
if (newMeasurementSelected >= measurementCount) {
newMeasurementSelected = 0;
}
} else {
newMeasurementSelected--;
if (newMeasurementSelected < 0) {
newMeasurementSelected = measurementCount - 1;
}
}
updateViewport(newMeasurementSelected);
};
const label = viewports.length > 1 ? _viewportLabels[viewportIndex] : '';
// TODO -> disabled double click for now: onDoubleClick={_onDoubleClick}
return (
<>
<ViewportActionBar
onDoubleClick={evt => {
evt.stopPropagation();
evt.preventDefault();
}}
onSeriesChange={onMeasurementChange}
studyData={{
label,
isTracked: false,
isLocked: displaySet.isLocked,
isHydrated,
studyDate: formatDate(StudyDate),
currentSeries: SeriesNumber,
seriesDescription: SeriesDescription,
modality: Modality,
patientInformation: {
patientName: PatientName
? OHIF.utils.formatPN(PatientName.Alphabetic)
: '',
patientSex: PatientSex || '',
patientAge: PatientAge || '',
MRN: PatientID || '',
thickness: SliceThickness ? `${SliceThickness.toFixed(2)}mm` : '',
spacing:
PixelSpacing && PixelSpacing.length
? `${PixelSpacing[0].toFixed(2)}mm x ${PixelSpacing[1].toFixed(
2
)}mm`
: '',
scanner: ManufacturerModelName || '',
},
}}
/>
<div className="relative flex flex-row w-full h-full overflow-hidden">
<CornerstoneViewport
onElementEnabled={onElementEnabled}
viewportIndex={viewportIndex}
imageIds={imageIds}
imageIdIndex={currentImageIdIndex}
// TODO: ViewportGrid Context?
isActive={true} // todo
isStackPrefetchEnabled={true} // todo
isPlaying={false}
frameRate={24}
isOverlayVisible={false}
// Sync resize throttle w/ sidepanel animation duration to prevent
// seizure inducing strobe blinking effect
resizeRefreshRateMs={150}
/>
<div className="absolute w-full">
{viewportDialogState.viewportIndex === viewportIndex && (
<Notification
message={viewportDialogState.message}
type={viewportDialogState.type}
actions={viewportDialogState.actions}
onSubmit={viewportDialogState.onSubmit}
onOutsideClick={viewportDialogState.onOutsideClick}
/>
)}
</div>
{childrenWithProps}
</div>
</>
);
}
const _viewportLabels = ['A', 'B', 'C', 'D', 'E', 'F', 'G', 'H', 'I'];
OHIFCornerstoneSRViewport.propTypes = {
displaySet: PropTypes.object.isRequired,
viewportIndex: PropTypes.number.isRequired,
dataSource: PropTypes.object,
children: PropTypes.node,
customProps: PropTypes.object,
};
OHIFCornerstoneSRViewport.defaultProps = {
customProps: {},
};
/**
* Obtain the CornerstoneTools Stack for the specified display set.
*
* @param {Object} displaySet
* @param {Object} dataSource
* @return {Object} CornerstoneTools Stack
*/
function _getCornerstoneStack(
measurement,
dataSource,
DisplaySetService,
element
) {
const { displaySetInstanceUID, TrackingUniqueIdentifier } = measurement;
const displaySet = DisplaySetService.getDisplaySetByUID(
displaySetInstanceUID
);
// Get stack from Stack Manager
const storedStack = StackManager.findOrCreateStack(displaySet, dataSource);
// Clone the stack here so we don't mutate it
const stack = Object.assign({}, storedStack);
const { imageId } = measurement;
stack.currentImageIdIndex = stack.imageIds.findIndex(i => i === imageId);
if (element) {
const srModule = cornerstoneTools.getModule(id);
srModule.setters.activeTrackingUniqueIdentifierForElement(
element,
TrackingUniqueIdentifier
);
}
return stack;
}
async function _getViewportAndActiveDisplaySetData(
dataSource,
displaySet,
measurementSelected,
DisplaySetService,
element
) {
let viewportData;
const { measurements } = displaySet;
const measurement = measurements[measurementSelected];
const stack = _getCornerstoneStack(
measurement,
dataSource,
DisplaySetService,
element
);
viewportData = {
StudyInstanceUID: displaySet.StudyInstanceUID,
displaySetInstanceUID: displaySet.displaySetInstanceUID,
stack,
};
const { displaySetInstanceUID } = measurement;
const referencedDisplaySet = DisplaySetService.getDisplaySetByUID(
displaySetInstanceUID
);
const image0 = referencedDisplaySet.images[0];
const activeDisplaySetData = {
PatientID: image0.PatientID,
PatientName: image0.PatientName,
PatientSex: image0.PatientSex,
PatientAge: image0.PatientAge,
SliceThickness: image0.SliceThickness,
StudyDate: image0.StudyDate,
SeriesDescription: image0.SeriesDescription,
SeriesInstanceUID: image0.SeriesInstanceUID,
SeriesNumber: image0.SeriesNumber,
ManufacturerModelName: image0.ManufacturerModelName,
PixelSpacing: image0.PixelSpacing,
displaySetInstanceUID,
};
return { viewportData, activeDisplaySetData };
}
function _onDoubleClick() {
const cancelActiveManipulatorsForElement = cornerstoneTools.getModule(
'manipulatorState'
).setters.cancelActiveManipulatorsForElement;
const enabledElements = cornerstoneTools.store.state.enabledElements;
enabledElements.forEach(element => {
cancelActiveManipulatorsForElement(element);
});
}
export default OHIFCornerstoneSRViewport;