ohif-viewer/extensions/cornerstone/src/init.tsx
Alireza 4734b3bac6
fix(volumeLoad): should not have missing slices when loading (#3287)
* fix(volumeLoad): should not have missing slices when loading

* add review comments
2023-03-29 09:40:22 -04:00

334 lines
9.3 KiB
TypeScript

import OHIF from '@ohif/core';
import React from 'react';
import * as cornerstone from '@cornerstonejs/core';
import * as cornerstoneTools from '@cornerstonejs/tools';
import {
init as cs3DInit,
eventTarget,
EVENTS,
metaData,
volumeLoader,
imageLoadPoolManager,
Settings,
utilities as csUtilities,
} from '@cornerstonejs/core';
import { Enums, utilities, ReferenceLinesTool } from '@cornerstonejs/tools';
import { cornerstoneStreamingImageVolumeLoader } from '@cornerstonejs/streaming-image-volume-loader';
import initWADOImageLoader from './initWADOImageLoader';
import initCornerstoneTools from './initCornerstoneTools';
import { connectToolsToMeasurementService } from './initMeasurementService';
import initCineService from './initCineService';
import interleaveCenterLoader from './utils/interleaveCenterLoader';
import nthLoader from './utils/nthLoader';
import interleaveTopToBottom from './utils/interleaveTopToBottom';
import initContextMenu from './initContextMenu';
// TODO: Cypress tests are currently grabbing this from the window?
window.cornerstone = cornerstone;
window.cornerstoneTools = cornerstoneTools;
/**
*
*/
export default async function init({
servicesManager,
commandsManager,
configuration,
appConfig,
}: Types.Extensions.ExtensionParams): Promise<void> {
await cs3DInit();
// For debugging e2e tests that are failing on CI
cornerstone.setUseCPURendering(Boolean(appConfig.useCPURendering));
// For debugging large datasets
const MAX_CACHE_SIZE_1GB = 1073741824;
const maxCacheSize = appConfig.maxCacheSize;
cornerstone.cache.setMaxCacheSize(
maxCacheSize ? maxCacheSize : MAX_CACHE_SIZE_1GB
);
initCornerstoneTools();
Settings.getRuntimeSettings().set(
'useCursors',
Boolean(appConfig.useCursors)
);
const {
userAuthenticationService,
measurementService,
customizationService,
displaySetService,
uiDialogService,
uiModalService,
uiNotificationService,
cineService,
cornerstoneViewportService,
hangingProtocolService,
toolGroupService,
viewportGridService,
stateSyncService,
} = servicesManager.services;
window.services = servicesManager.services;
if (
appConfig.showWarningMessageForCrossOrigin &&
!window.crossOriginIsolated
) {
uiNotificationService.show({
title: 'Cross Origin Isolation',
message:
'Cross Origin Isolation is not enabled, volume rendering will not work (e.g., MPR)',
type: 'warning',
});
}
if (
appConfig.showCPUFallbackMessage &&
cornerstone.getShouldUseCPURendering()
) {
_showCPURenderingModal(uiModalService, hangingProtocolService);
}
// Stores a map from `lutPresentationId` to a Presentation object so that
// an OHIFCornerstoneViewport can be redisplayed with the same LUT
stateSyncService.register('lutPresentationStore', { clearOnModeExit: true });
// Stores a map from `positionPresentationId` to a Presentation object so that
// an OHIFCornerstoneViewport can be redisplayed with the same position
stateSyncService.register('positionPresentationStore', {
clearOnModeExit: true,
});
const labelmapRepresentation =
cornerstoneTools.Enums.SegmentationRepresentations.Labelmap;
cornerstoneTools.segmentation.config.setGlobalRepresentationConfig(
labelmapRepresentation,
{
fillAlpha: 0.3,
fillAlphaInactive: 0.2,
outlineOpacity: 1,
outlineOpacityInactive: 0.65,
}
);
const metadataProvider = OHIF.classes.MetadataProvider;
volumeLoader.registerVolumeLoader(
'cornerstoneStreamingImageVolume',
cornerstoneStreamingImageVolumeLoader
);
hangingProtocolService.registerImageLoadStrategy(
'interleaveCenter',
interleaveCenterLoader
);
hangingProtocolService.registerImageLoadStrategy(
'interleaveTopToBottom',
interleaveTopToBottom
);
hangingProtocolService.registerImageLoadStrategy('nth', nthLoader);
// add metadata providers
metaData.addProvider(
csUtilities.calibratedPixelSpacingMetadataProvider.get.bind(
csUtilities.calibratedPixelSpacingMetadataProvider
)
); // this provider is required for Calibration tool
metaData.addProvider(metadataProvider.get.bind(metadataProvider), 9999);
imageLoadPoolManager.maxNumRequests = {
interaction: appConfig?.maxNumRequests?.interaction || 100,
thumbnail: appConfig?.maxNumRequests?.thumbnail || 75,
prefetch: appConfig?.maxNumRequests?.prefetch || 10,
};
initWADOImageLoader(userAuthenticationService, appConfig);
/* Measurement Service */
this.measurementServiceSource = connectToolsToMeasurementService(
servicesManager
);
initCineService(cineService);
// When a custom image load is performed, update the relevant viewports
hangingProtocolService.subscribe(
hangingProtocolService.EVENTS.CUSTOM_IMAGE_LOAD_PERFORMED,
volumeInputArrayMap => {
for (const entry of volumeInputArrayMap.entries()) {
const [viewportId, volumeInputArray] = entry;
const viewport = cornerstoneViewportService.getCornerstoneViewport(
viewportId
);
const ohifViewport = cornerstoneViewportService.getViewportInfo(
viewportId
);
const {
lutPresentationStore,
positionPresentationStore,
} = stateSyncService.getState();
const { presentationIds } = ohifViewport.getViewportOptions();
const presentations = {
positionPresentation:
positionPresentationStore[presentationIds?.positionPresentationId],
lutPresentation:
lutPresentationStore[presentationIds?.lutPresentationId],
};
cornerstoneViewportService.setVolumesForViewport(
viewport,
volumeInputArray,
presentations
);
}
}
);
initContextMenu({
cornerstoneViewportService,
customizationService,
commandsManager,
});
const newStackCallback = evt => {
const { element } = evt.detail;
utilities.stackPrefetch.enable(element);
};
const resetCrosshairs = evt => {
const { element } = evt.detail;
const { viewportId, renderingEngineId } = cornerstone.getEnabledElement(
element
);
const toolGroup = cornerstoneTools.ToolGroupManager.getToolGroupForViewport(
viewportId,
renderingEngineId
);
if (!toolGroup || !toolGroup._toolInstances?.['Crosshairs']) {
return;
}
const mode = toolGroup._toolInstances['Crosshairs'].mode;
if (mode === Enums.ToolModes.Active) {
toolGroup.setToolActive('Crosshairs');
} else if (mode === Enums.ToolModes.Passive) {
toolGroup.setToolPassive('Crosshairs');
} else if (mode === Enums.ToolModes.Enabled) {
toolGroup.setToolEnabled('Crosshairs');
}
};
function elementEnabledHandler(evt) {
const { element } = evt.detail;
element.addEventListener(EVENTS.CAMERA_RESET, resetCrosshairs);
eventTarget.addEventListener(
EVENTS.STACK_VIEWPORT_NEW_STACK,
newStackCallback
);
}
function elementDisabledHandler(evt) {
const { element } = evt.detail;
element.removeEventListener(EVENTS.CAMERA_RESET, resetCrosshairs);
// TODO - consider removing the callback when all elements are gone
// eventTarget.removeEventListener(
// EVENTS.STACK_VIEWPORT_NEW_STACK,
// newStackCallback
// );
}
eventTarget.addEventListener(
EVENTS.ELEMENT_ENABLED,
elementEnabledHandler.bind(null)
);
eventTarget.addEventListener(
EVENTS.ELEMENT_DISABLED,
elementDisabledHandler.bind(null)
);
viewportGridService.subscribe(
viewportGridService.EVENTS.ACTIVE_VIEWPORT_INDEX_CHANGED,
({ viewportIndex, viewportId }) => {
viewportId = viewportId || `viewport-${viewportIndex}`;
const toolGroup = toolGroupService.getToolGroupForViewport(viewportId);
if (!toolGroup || !toolGroup._toolInstances?.['ReferenceLines']) {
return;
}
// check if reference lines are active
const referenceLinesEnabled =
toolGroup._toolInstances['ReferenceLines'].mode ===
Enums.ToolModes.Enabled;
if (!referenceLinesEnabled) {
return;
}
toolGroup.setToolConfiguration(
ReferenceLinesTool.toolName,
{
sourceViewportId: viewportId,
},
true // overwrite
);
// make sure to set it to enabled again since we want to recalculate
// the source-target lines
toolGroup.setToolEnabled(ReferenceLinesTool.toolName);
}
);
}
function CPUModal() {
return (
<div>
<p>
Your computer does not have enough GPU power to support the default GPU
rendering mode. OHIF has switched to CPU rendering mode. Please note
that CPU rendering does not support all features such as Volume
Rendering, Multiplanar Reconstruction, and Segmentation Overlays.
</p>
</div>
);
}
function _showCPURenderingModal(uiModalService, hangingProtocolService) {
const callback = progress => {
if (progress === 100) {
uiModalService.show({
content: CPUModal,
title: 'OHIF Fell Back to CPU Rendering',
});
return true;
}
};
const { unsubscribe } = hangingProtocolService.subscribe(
hangingProtocolService.EVENTS.PROTOCOL_CHANGED,
() => {
const done = callback(100);
if (done) {
unsubscribe();
}
}
);
}