ohif-viewer/extensions/cornerstone-dicom-seg/src/panels/SegmentationToolbox.tsx
dxlin 40673f64b3
feat(Segmentation): download RTSS from Labelmap(#3692)
Co-authored-by: Alireza <ar.sedghi@gmail.com>
2023-10-06 15:00:04 -04:00

406 lines
12 KiB
TypeScript

import React, { useCallback, useEffect, useState, useReducer } from 'react';
import { AdvancedToolbox, InputDoubleRange, useViewportGrid } from '@ohif/ui';
import { Types } from '@ohif/extension-cornerstone';
import { utilities } from '@cornerstonejs/tools';
const { segmentation: segmentationUtils } = utilities;
const TOOL_TYPES = {
CIRCULAR_BRUSH: 'CircularBrush',
SPHERE_BRUSH: 'SphereBrush',
CIRCULAR_ERASER: 'CircularEraser',
SPHERE_ERASER: 'SphereEraser',
CIRCLE_SHAPE: 'CircleScissor',
RECTANGLE_SHAPE: 'RectangleScissor',
SPHERE_SHAPE: 'SphereScissor',
THRESHOLD_CIRCULAR_BRUSH: 'ThresholdCircularBrush',
THRESHOLD_SPHERE_BRUSH: 'ThresholdSphereBrush',
};
const ACTIONS = {
SET_TOOL_CONFIG: 'SET_TOOL_CONFIG',
SET_ACTIVE_TOOL: 'SET_ACTIVE_TOOL',
};
const initialState = {
Brush: {
brushSize: 15,
mode: 'CircularBrush', // Can be 'CircularBrush' or 'SphereBrush'
},
Eraser: {
brushSize: 15,
mode: 'CircularEraser', // Can be 'CircularEraser' or 'SphereEraser'
},
Shapes: {
brushSize: 15,
mode: 'CircleScissor', // E.g., 'CircleScissor', 'RectangleScissor', or 'SphereScissor'
},
ThresholdBrush: {
brushSize: 15,
thresholdRange: [-500, 500],
},
activeTool: null,
};
function toolboxReducer(state, action) {
switch (action.type) {
case ACTIONS.SET_TOOL_CONFIG:
const { tool, config } = action.payload;
return {
...state,
[tool]: {
...state[tool],
...config,
},
};
case ACTIONS.SET_ACTIVE_TOOL:
return { ...state, activeTool: action.payload };
default:
return state;
}
}
function SegmentationToolbox({ servicesManager, extensionManager }) {
const { toolbarService, segmentationService, toolGroupService } =
servicesManager.services as Types.CornerstoneServices;
const [viewportGrid] = useViewportGrid();
const { viewports, activeViewportId } = viewportGrid;
const [toolsEnabled, setToolsEnabled] = useState(false);
const [state, dispatch] = useReducer(toolboxReducer, initialState);
const updateActiveTool = useCallback(() => {
if (!viewports?.size || activeViewportId === undefined) {
return;
}
const viewport = viewports.get(activeViewportId);
if (!viewport) {
return;
}
dispatch({
type: ACTIONS.SET_ACTIVE_TOOL,
payload: toolGroupService.getActiveToolForViewport(viewport.viewportId),
});
}, [activeViewportId, viewports, toolGroupService, dispatch]);
const setToolActive = useCallback(
toolName => {
toolbarService.recordInteraction({
interactionType: 'tool',
commands: [
{
commandName: 'setToolActive',
commandOptions: {
toolName,
},
},
],
});
dispatch({ type: ACTIONS.SET_ACTIVE_TOOL, payload: toolName });
},
[toolbarService, dispatch]
);
/**
* sets the tools enabled IF there are segmentations
*/
useEffect(() => {
const events = [
segmentationService.EVENTS.SEGMENTATION_ADDED,
segmentationService.EVENTS.SEGMENTATION_UPDATED,
segmentationService.EVENTS.SEGMENTATION_REMOVED,
];
const unsubscriptions = [];
events.forEach(event => {
const { unsubscribe } = segmentationService.subscribe(event, () => {
const segmentations = segmentationService.getSegmentations();
const activeSegmentation = segmentations?.find(seg => seg.isActive);
setToolsEnabled(activeSegmentation?.segmentCount > 0);
});
unsubscriptions.push(unsubscribe);
});
updateActiveTool();
return () => {
unsubscriptions.forEach(unsubscribe => unsubscribe());
};
}, [activeViewportId, viewports, segmentationService, updateActiveTool]);
/**
* Update the active tool when the toolbar state changes
*/
useEffect(() => {
const { unsubscribe } = toolbarService.subscribe(
toolbarService.EVENTS.TOOL_BAR_STATE_MODIFIED,
() => {
updateActiveTool();
}
);
return () => {
unsubscribe();
};
}, [toolbarService, updateActiveTool]);
useEffect(() => {
// if the active tool is not a brush tool then do nothing
if (!Object.values(TOOL_TYPES).includes(state.activeTool)) {
return;
}
// if the tool is Segmentation and it is enabled then do nothing
if (toolsEnabled) {
return;
}
// if the tool is Segmentation and it is disabled, then switch
// back to the window level tool to not confuse the user when no
// segmentation is active or when there is no segment in the segmentation
setToolActive('WindowLevel');
}, [toolsEnabled, state.activeTool, setToolActive]);
const updateBrushSize = useCallback(
(toolName, brushSize) => {
toolGroupService.getToolGroupIds()?.forEach(toolGroupId => {
segmentationUtils.setBrushSizeForToolGroup(toolGroupId, brushSize, toolName);
});
},
[toolGroupService]
);
const onBrushSizeChange = useCallback(
(valueAsStringOrNumber, toolCategory) => {
const value = Number(valueAsStringOrNumber);
_getToolNamesFromCategory(toolCategory).forEach(toolName => {
updateBrushSize(toolName, value);
});
dispatch({
type: ACTIONS.SET_TOOL_CONFIG,
payload: {
tool: toolCategory,
config: { brushSize: value },
},
});
},
[toolGroupService, dispatch]
);
const handleRangeChange = useCallback(
newRange => {
if (
newRange[0] === state.ThresholdBrush.thresholdRange[0] &&
newRange[1] === state.ThresholdBrush.thresholdRange[1]
) {
return;
}
const toolNames = _getToolNamesFromCategory('ThresholdBrush');
toolNames.forEach(toolName => {
toolGroupService.getToolGroupIds()?.forEach(toolGroupId => {
const toolGroup = toolGroupService.getToolGroup(toolGroupId);
toolGroup.setToolConfiguration(toolName, {
strategySpecificConfiguration: {
THRESHOLD_INSIDE_CIRCLE: {
threshold: newRange,
},
},
});
});
});
dispatch({
type: ACTIONS.SET_TOOL_CONFIG,
payload: {
tool: 'ThresholdBrush',
config: { thresholdRange: newRange },
},
});
},
[toolGroupService, dispatch, state.ThresholdBrush.thresholdRange]
);
return (
<AdvancedToolbox
title="Segmentation Tools"
items={[
{
name: 'Brush',
icon: 'icon-tool-brush',
disabled: !toolsEnabled,
active:
state.activeTool === TOOL_TYPES.CIRCULAR_BRUSH ||
state.activeTool === TOOL_TYPES.SPHERE_BRUSH,
onClick: () => setToolActive(TOOL_TYPES.CIRCULAR_BRUSH),
options: [
{
name: 'Radius (mm)',
id: 'brush-radius',
type: 'range',
min: 0.5,
max: 99.5,
value: state.Brush.brushSize,
step: 0.5,
onChange: value => onBrushSizeChange(value, 'Brush'),
},
{
name: 'Mode',
type: 'radio',
id: 'brush-mode',
value: state.Brush.mode,
values: [
{ value: TOOL_TYPES.CIRCULAR_BRUSH, label: 'Circle' },
{ value: TOOL_TYPES.SPHERE_BRUSH, label: 'Sphere' },
],
onChange: value => setToolActive(value),
},
],
},
{
name: 'Eraser',
icon: 'icon-tool-eraser',
disabled: !toolsEnabled,
active:
state.activeTool === TOOL_TYPES.CIRCULAR_ERASER ||
state.activeTool === TOOL_TYPES.SPHERE_ERASER,
onClick: () => setToolActive(TOOL_TYPES.CIRCULAR_ERASER),
options: [
{
name: 'Radius (mm)',
type: 'range',
id: 'eraser-radius',
min: 0.5,
max: 99.5,
value: state.Eraser.brushSize,
step: 0.5,
onChange: value => onBrushSizeChange(value, 'Eraser'),
},
{
name: 'Mode',
type: 'radio',
id: 'eraser-mode',
value: state.Eraser.mode,
values: [
{ value: TOOL_TYPES.CIRCULAR_ERASER, label: 'Circle' },
{ value: TOOL_TYPES.SPHERE_ERASER, label: 'Sphere' },
],
onChange: value => setToolActive(value),
},
],
},
{
name: 'Shapes',
icon: 'icon-tool-shape',
disabled: !toolsEnabled,
active:
state.activeTool === TOOL_TYPES.CIRCLE_SHAPE ||
state.activeTool === TOOL_TYPES.RECTANGLE_SHAPE ||
state.activeTool === TOOL_TYPES.SPHERE_SHAPE,
onClick: () => setToolActive(TOOL_TYPES.CIRCLE_SHAPE),
options: [
{
name: 'Mode',
type: 'radio',
value: state.Shapes.mode,
id: 'shape-mode',
values: [
{ value: TOOL_TYPES.CIRCLE_SHAPE, label: 'Circle' },
{ value: TOOL_TYPES.RECTANGLE_SHAPE, label: 'Rectangle' },
{ value: TOOL_TYPES.SPHERE_SHAPE, label: 'Sphere' },
],
onChange: value => setToolActive(value),
},
],
},
{
name: 'Threshold Tool',
icon: 'icon-tool-threshold',
disabled: !toolsEnabled,
active:
state.activeTool === TOOL_TYPES.THRESHOLD_CIRCULAR_BRUSH ||
state.activeTool === TOOL_TYPES.THRESHOLD_SPHERE_BRUSH,
onClick: () => setToolActive(TOOL_TYPES.THRESHOLD_CIRCULAR_BRUSH),
options: [
{
name: 'Radius (mm)',
id: 'threshold-radius',
type: 'range',
min: 0.5,
max: 99.5,
value: state.ThresholdBrush.brushSize,
step: 0.5,
onChange: value => onBrushSizeChange(value, 'ThresholdBrush'),
},
{
name: 'Mode',
type: 'radio',
id: 'threshold-mode',
value: state.activeTool,
values: [
{ value: TOOL_TYPES.THRESHOLD_CIRCULAR_BRUSH, label: 'Circle' },
{ value: TOOL_TYPES.THRESHOLD_SPHERE_BRUSH, label: 'Sphere' },
],
onChange: value => setToolActive(value),
},
{
type: 'custom',
id: 'segmentation-threshold-range',
children: () => {
return (
<div>
<div className="bg-secondary-light h-[1px]"></div>
<div className="mt-1 text-[13px] text-white">Threshold</div>
<InputDoubleRange
values={state.ThresholdBrush.thresholdRange}
onChange={handleRangeChange}
minValue={-1000}
maxValue={1000}
step={1}
showLabel={true}
allowNumberEdit={true}
showAdjustmentArrows={false}
/>
</div>
);
},
},
],
},
]}
/>
);
}
function _getToolNamesFromCategory(category) {
let toolNames = [];
switch (category) {
case 'Brush':
toolNames = ['CircularBrush', 'SphereBrush'];
break;
case 'Eraser':
toolNames = ['CircularEraser', 'SphereEraser'];
break;
case 'ThresholdBrush':
toolNames = ['ThresholdCircularBrush', 'ThresholdSphereBrush'];
break;
default:
break;
}
return toolNames;
}
export default SegmentationToolbox;