1018 lines
28 KiB
HTML
1018 lines
28 KiB
HTML
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<!DOCTYPE HTML>
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<html lang="" >
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<head>
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<meta charset="UTF-8">
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<meta content="text/html; charset=utf-8" http-equiv="Content-Type">
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<title>Usage · OHIF</title>
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<meta name="HandheldFriendly" content="true"/>
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<body>
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<li class="chapter " data-level="1.1" data-path="../">
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<a href="../">
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Introduction
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</a>
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</li>
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<li class="chapter " data-level="1.2" >
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<span>
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Essentials
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</span>
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<ul class="articles">
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<li class="chapter " data-level="1.2.1" data-path="../essentials/installation.html">
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<a href="../essentials/installation.html">
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Installation
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</a>
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<li class="chapter " data-level="1.2.2" data-path="../essentials/getting-started.html">
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<a href="../essentials/getting-started.html">
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Getting Started
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</a>
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</li>
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<li class="chapter " data-level="1.2.3" data-path="../essentials/architecture.html">
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<a href="../essentials/architecture.html">
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Architecture
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</a>
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</li>
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<li class="chapter " data-level="1.2.4" data-path="../essentials/configuration.html">
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<a href="../essentials/configuration.html">
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Configuration
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</a>
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<li class="chapter " data-level="1.2.5" data-path="../essentials/troubleshooting.html">
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<a href="../essentials/troubleshooting.html">
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Troubleshooting
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</a>
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</li>
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</ul>
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</li>
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<li class="chapter " data-level="1.3" >
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<span>
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Connecting to Image Archives
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</span>
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<ul class="articles">
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<li class="chapter " data-level="1.3.1" data-path="../connecting-to-image-archives/options.html">
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<a href="../connecting-to-image-archives/options.html">
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What are my options?
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</a>
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<ul class="articles">
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<li class="chapter " data-level="1.3.1.1" data-path="../connecting-to-image-archives/dicomweb.html">
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<a href="../connecting-to-image-archives/dicomweb.html">
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DICOM Web
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</a>
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</li>
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<li class="chapter " data-level="1.3.1.2" data-path="../connecting-to-image-archives/dimse.html">
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<a href="../connecting-to-image-archives/dimse.html">
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DICOM Message Service Element
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</a>
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</li>
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</ul>
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</li>
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<li class="chapter " data-level="1.3.2" >
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<span>
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Examples
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</span>
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<ul class="articles">
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<li class="chapter " data-level="1.3.2.1" data-path="../connecting-to-image-archives/dcm4chee-with-docker.html">
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<a href="../connecting-to-image-archives/dcm4chee-with-docker.html">
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dcm4chee w/ Docker
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</a>
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</li>
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<li class="chapter " data-level="1.3.2.2" data-path="../connecting-to-image-archives/orthanc-with-docker.html">
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<a href="../connecting-to-image-archives/orthanc-with-docker.html">
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Orthanc w/ Docker
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</a>
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</li>
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<li class="chapter " data-level="1.3.2.3" data-path="../connecting-to-image-archives/osirix.html">
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<a href="../connecting-to-image-archives/osirix.html">
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Osirix
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</a>
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</li>
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</ul>
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</li>
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</ul>
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</li>
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<li class="chapter " data-level="1.4" >
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<span>
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Data Organization
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</span>
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<ul class="articles">
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<li class="chapter " data-level="1.4.1" data-path="../data/data-hierarchy.html">
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<a href="../data/data-hierarchy.html">
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Data Hierarchy
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</a>
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</li>
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<li class="chapter " data-level="1.4.2" data-path="../data/image-viewport.html">
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<a href="../data/image-viewport.html">
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Image Viewport
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</a>
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</li>
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</ul>
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</li>
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<li class="chapter " data-level="1.5" >
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<span>
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Viewport Layout
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</span>
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<ul class="articles">
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<li class="chapter " data-level="1.5.1" data-path="../layout/layout-management.html">
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<a href="../layout/layout-management.html">
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Layout Management
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</a>
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</li>
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<li class="chapter " data-level="1.5.2" data-path="../layout/hanging-protocols.html">
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<a href="../layout/hanging-protocols.html">
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Hanging Protocols
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</a>
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</li>
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</ul>
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</li>
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<li class="chapter " data-level="1.6" >
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<span>
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Packages
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</span>
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<ul class="articles">
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<li class="chapter " data-level="1.6.1" data-path="../packages/measurements.html">
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<a href="../packages/measurements.html">
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Measurements Package (ohif-measurements)
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</a>
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</li>
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</ul>
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</li>
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<li class="chapter " data-level="1.7" >
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<span>
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Deployment
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</span>
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<ul class="articles">
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<li class="chapter " data-level="1.7.1" data-path="../deployment/building-for-production.html">
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<a href="../deployment/building-for-production.html">
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Building for Production
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</a>
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</li>
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<li class="chapter " data-level="1.7.2" data-path="../deployment/security.html">
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<a href="../deployment/security.html">
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Security
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</a>
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</li>
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</ul>
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</li>
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<li class="chapter " data-level="1.8" >
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<span>
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I Want To...
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</span>
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<ul class="articles">
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<li class="chapter " data-level="1.8.1" data-path="../I-want-to/add-a-tool-to-the-viewer.html">
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<a href="../I-want-to/add-a-tool-to-the-viewer.html">
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Add a Tool to the Viewer
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</a>
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</li>
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<li class="chapter " data-level="1.8.2" data-path="../I-want-to/add-a-logo-to-the-viewer.html">
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<a href="../I-want-to/add-a-logo-to-the-viewer.html">
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Add a Logo to the Viewer
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</a>
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</li>
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</ul>
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</li>
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<li class="divider"></li>
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<li class="chapter " data-level="2.1" >
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<span>
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Example Applications
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</span>
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<ul class="articles">
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<li class="chapter " data-level="2.1.1" data-path="../example-applications/ohif-viewer.html">
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<a href="../example-applications/ohif-viewer.html">
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OHIF Viewer
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</a>
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</li>
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<li class="chapter " data-level="2.1.2" data-path="../example-applications/lesion-tracker.html">
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<a href="../example-applications/lesion-tracker.html">
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Lesion Tracker
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</a>
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</li>
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<li class="chapter " data-level="2.1.3" data-path="../example-applications/standalone-viewer.html">
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<a href="../example-applications/standalone-viewer.html">
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Standalone Viewer
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</a>
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</li>
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</ul>
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</li>
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<li class="divider"></li>
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<li class="chapter " data-level="3.1" >
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<span>
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Standalone Viewer Integration
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</span>
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<ul class="articles">
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<li class="chapter active" data-level="3.1.1" data-path="usage.html">
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<a href="usage.html">
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Usage
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</a>
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</li>
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</ul>
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</li>
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<li class="divider"></li>
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<li class="chapter " data-level="4.1" >
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<span>
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Lesion Tracker
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</span>
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<ul class="articles">
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<li class="chapter " data-level="4.1.1" data-path="../lesion-tracker/user-manual.html">
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<a href="../lesion-tracker/user-manual.html">
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User Manual
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</a>
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</li>
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<li class="chapter " data-level="4.1.2" data-path="../lesion-tracker/installation-on-windows.html">
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<a href="../lesion-tracker/installation-on-windows.html">
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Installation on Windows
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</a>
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</li>
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<li class="chapter " data-level="4.1.3" data-path="../lesion-tracker/manage-studies-in-orthanc.html">
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<a href="../lesion-tracker/manage-studies-in-orthanc.html">
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Manage Studies in Orthanc
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</a>
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</li>
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<li class="chapter " data-level="4.1.4" data-path="../lesion-tracker/user-accounts.html">
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<a href="../lesion-tracker/user-accounts.html">
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User Accounts
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</a>
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</li>
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<li class="chapter " data-level="4.1.5" data-path="../lesion-tracker/study-and-timepoint-management.html">
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<a href="../lesion-tracker/study-and-timepoint-management.html">
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Study and Timepoint Management
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</a>
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</li>
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<li class="chapter " data-level="4.1.6" data-path="../lesion-tracker/using-the-viewer.html">
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<a href="../lesion-tracker/using-the-viewer.html">
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Using the Viewer
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</a>
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</li>
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<li class="chapter " data-level="4.1.7" data-path="../lesion-tracker/user-preferences.html">
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<a href="../lesion-tracker/user-preferences.html">
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User Preferences
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</a>
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</li>
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<li class="chapter " data-level="4.1.8" data-path="../lesion-tracker/server-management.html">
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<a href="../lesion-tracker/server-management.html">
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Server Management
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</a>
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</li>
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<li class="chapter " data-level="4.1.9" data-path="../lesion-tracker/audit-trail.html">
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<a href="../lesion-tracker/audit-trail.html">
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Audit Trail
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</a>
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</li>
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</ul>
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<li class="divider"></li>
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<li class="chapter " data-level="5.1" >
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<span>
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FAQ
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<!-- Title -->
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<h1>
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<i class="fa fa-circle-o-notch fa-spin"></i>
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<a href=".." >Usage</a>
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</h1>
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<section class="normal markdown-section">
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<h1 id="standalone-viewer"><a name="standalone-viewer" class="plugin-anchor" href="#standalone-viewer"><i class="fa fa-link" aria-hidden="true"></i></a>Standalone Viewer</h1>
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<h2 id="quick-start"><a name="quick-start" class="plugin-anchor" href="#quick-start"><i class="fa fa-link" aria-hidden="true"></i></a>Quick Start</h2>
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<p>Install dependencies:</p>
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<pre><code class="lang-bash">meteor npm install
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</code></pre>
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<p>Run the application:</p>
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<pre><code class="lang-bash">METEOR_PACKAGE_DIRS=<span class="hljs-string">"../../Packages"</span> ROOT_URL=http://localhost:3000 meteor
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</code></pre>
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<p>Open your web browser and navigate to one of the following URLs to test the standalone viewer application:</p>
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<pre><code class="lang-bash">http://localhost:3000/<span class="hljs-built_in">test</span>Id
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</code></pre>
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<p>Or, to load DICOMs:</p>
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<pre><code class="lang-bash">http://localhost:3000/<span class="hljs-built_in">test</span>DICOMs
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</code></pre>
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<h3 id="to-build-for-the-client"><a name="to-build-for-the-client" class="plugin-anchor" href="#to-build-for-the-client"><i class="fa fa-link" aria-hidden="true"></i></a>To Build for the Client</h3>
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<p>It is possible to build this standalone viewer to run as a client-only bundle of HTML, JavaScript, and CSS.</p>
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<ol>
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<li><p>First, install <a href="https://github.com/brettg2/meteor-build-client/" target="_blank">meteor-build-client-fixed</a>.</p>
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<pre><code class="lang-bash">sudo npm install -g meteor-build-client-fixed
|
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</code></pre>
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</li>
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<li><p>Next, build the client bundle into an output folder ("myOutputFolder") with a base URL ("localhost:3000"). In production, this would be the URL where the Viewer is available.</p>
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<pre><code>METEOR_PACKAGE_DIRS="../../Packages" meteor-build-client-fixed ../myOutputFolder -u localhost:3000
|
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</code></pre></li>
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<li><p>Test the bundled client-side package locally.</p>
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<p> Note: You will need to have Python installed to run the test server for this case. It is not a typical simple HTTP server. The bundled script redirects all URLs following the base URL to index.html. It will then use the routes defined in your application to handle the URL parameters.</p>
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<p> In our case, this means it will request a JSON file at baseURL/api/[id parameter].</p>
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<p> So if you navigate to <a href="http://localhost:3000/sampleJPEG.json" target="_blank">http://localhost:3000/sampleJPEG.json</a> the application will retrieve the JSON from <a href="http://localhost:3000/api/sampleJPEG.json" target="_blank">http://localhost:3000/api/sampleJPEG.json</a> and use it to populate the viewer. If something appears to be broken, make sure you retrieve a JSON file at the /api URL.</p>
|
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<p> Create the api folder for your data</p>
|
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<pre><code class="lang-bash"><span class="hljs-built_in">cd</span> myOutputFolder
|
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mkdir api
|
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</code></pre>
|
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<p> Copy your data into the folder</p>
|
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<pre><code class="lang-bash">cp ../etc/sample* api/
|
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</code></pre>
|
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<p> Run the server</p>
|
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<pre><code class="lang-bash">python ../etc/redirectingSimpleServer.py
|
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</code></pre>
|
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<p> Open your web browser and navigate to <a href="http://localhost:3000/sampleJPEG.json" target="_blank">http://localhost:3000/sampleJPEG.json</a> or <a href="http://localhost:3000/sampleDICOM.json" target="_blank">http://localhost:3000/sampleDICOM.json</a></p>
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</li>
|
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</ol>
|
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<h3 id="testing-the-sample-client-only-build"><a name="testing-the-sample-client-only-build" class="plugin-anchor" href="#testing-the-sample-client-only-build"><i class="fa fa-link" aria-hidden="true"></i></a>Testing the Sample client-only build</h3>
|
|
<p>For the sake of simplicity we have also included a pre-built client-only version of the standalone viewer, which can be found in the SampleClientOnlyBuild folder.</p>
|
|
<p>You can test this with:</p>
|
|
<pre><code class="lang-bash"> <span class="hljs-built_in">cd</span> SampleClientOnlyBuild
|
|
python ../etc/redirectingSimpleServer.py
|
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</code></pre>
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