ohif-viewer/platform/viewer
Gustavo André Lelis ebe1af8d4f feat: 🎸 DICOM SR STOW on MeasurementAPI (#954)
* feat: 🎸 DICOM SR STOW on MeasurementAPI

Closes: #758

* feat: 🎸 Adding the dataExchance from DICOM SR

* feat: 🎸 Fix some issues and get the retrieve measurements working

* feat: 🎸 Preventing measurement tool helpers to broke because the data is not Number (it comes as string from dcmjs)

* feat: 🎸 Adding a button to start testing SATE functionality

* feat: 🎸Small fixes into the code

* feat: 🎸 MAke sure we get latest SR in the study, even on lazyLoad mode

* Revert "feat: 🎸 Preventing measurement tool helpers to broke because the data is not Number (it comes as string from dcmjs)"

This reverts commit 4b3a1efb5810487d2319826fd59c03d779882b5e.

* feat: 🎸 Make sure after sync we update the viewports and also that annotation tools are set to passive, so it can be drawn in the viewports

* feat: 🎸 Remove console logs and start using OHIF.log

* feat: 🎸 Refactor measurement table to use Snackbar service of messages and make sure we only show save button if server type is dicomWeb

* feat: 🎸 Refactor to remove mocked wadoRoot and use server

* Fix to expose error once we can't save the SR

* Update DCMJS into latest dev version

* Update dcmjs with latest fixes

* Fix PR callouts

* Logging error on MeasurementReport creation

* Preventing from breaking on non supported tools and also warning that some toolType is not sopported

* Small error message update

* Expose better the errors and when we have unsopported tools into the measurements

* Renaming variable

* Expose dcmjs tool support check

* Change the way we warn the unsupportedTools

* Adding style to the button

* Small change on button style

* Fix git conflicts

* Fix after merge with latest master

* Fix after merge with master, btn was not clickable

* Fixing callouts

* Adding util functions into files and refactor with JSDocs

* Refactoring code, adding some basic JSDocs

* Bump dcmjs with latest version and fixes

* JSDocs and small refactors

* yarn lock file after dcmjs update

* Remove unused parameters

* Registering a plain copy of server into measurementAPI

* Small refactor

* Start changing from toolType to toolName

* Rename a function to get instanceMetadata

* Adding error if server is not DICOMWeb on retrieve

* Move snackbar outside of UI component and use UINotificationService

* Refactor and JSDocs

* Small fixes on JSDocs (style)

* Remove unused import

* Improve JSDocs on MeasurementApi

* Remove refactor leftover

* Improve JSDocs and propTypes

* JSDocs and small refactors
2019-12-11 11:14:01 -05:00
..
.recipes docs(data-source): new file locations, react-scripts to webpack, new env variables for proxy 2019-09-05 08:45:11 -04:00
.webpack feat: service worker (#1045) 2019-10-29 14:51:40 -04:00
assets Chore/kill yalc with fire (#629) 2019-08-13 15:36:46 -04:00
cypress fix: User Preferences Issues (#1207) 2019-11-28 00:48:27 -05:00
public Fix config check in extension init 2019-12-11 06:54:41 -03:00
src feat: 🎸 DICOM SR STOW on MeasurementAPI (#954) 2019-12-11 11:14:01 -05:00
.all-contributorsrc Chore/kill yalc with fire (#629) 2019-08-13 15:36:46 -04:00
.browserslistrc fix: measurementsAPI issue caused by production build (#842) 2019-09-04 13:53:13 -04:00
.dockerignore Chore/kill yalc with fire (#629) 2019-08-13 15:36:46 -04:00
.env Chore/kill yalc with fire (#629) 2019-08-13 15:36:46 -04:00
.env.example ci: set NODE_ENV, fix out of memory issue, fix hot reload bundling 2019-08-29 08:53:33 -04:00
.eslintignore Chore/kill yalc with fire (#629) 2019-08-13 15:36:46 -04:00
babel.config.js Chore/kill yalc with fire (#629) 2019-08-13 15:36:46 -04:00
CHANGELOG.md chore(release): publish [skip ci] 2019-12-11 15:41:29 +00:00
cypress.json test: Adding Percy Snapshot on VTK, PDF and Microscopy tests (#1059) 2019-10-21 14:30:50 -04:00
jest.config.js Chore/kill yalc with fire (#629) 2019-08-13 15:36:46 -04:00
jestBabelTransform.js Chore/kill yalc with fire (#629) 2019-08-13 15:36:46 -04:00
LICENSE Chore/kill yalc with fire (#629) 2019-08-13 15:36:46 -04:00
package.json feat: 🎸 DICOM SR STOW on MeasurementAPI (#954) 2019-12-11 11:14:01 -05:00
postcss.config.js Chore/kill yalc with fire (#629) 2019-08-13 15:36:46 -04:00
README.md docs: shift files around to match summary structure 2019-12-07 00:12:08 -05:00
server.js fix: measurementsAPI issue caused by production build (#842) 2019-09-04 13:53:13 -04:00

@ohif/viewer

@ohif/viewer is a zero-footprint medical image viewer provided by the Open Health Imaging Foundation (OHIF). It is a configurable and extensible progressive web application with out-of-the-box support for image archives which support DICOMweb.


NPM version NPM downloads Pulls All Contributors MIT License

ATTENTION: If you are looking for Version 1 (the Meteor Version) of this repository, it lives on the v1.x branch

Why?

Building a web based medical imaging viewer from scratch is time intensive, hard to get right, and expensive. Instead of re-inventing the wheel, you can use the OHIF Viewer as a rock solid platform to build on top of. The Viewer is a React Progressive Web Application that can be embedded in existing applications via it's packaged source (ohif-viewer) or hosted stand-alone. The Viewer exposes configuration and extensions to support workflow customization and advanced functionality at common integration points.

If you're interested in using the OHIF Viewer, but you're not sure it supports your use case check out our docs. Still not sure, or you would like to propose new features? Don't hesitate to create an issue or open a pull request.

Getting Started

This readme is specific to testing and developing locally. If you're more interested in production deployment strategies, you can check out our documentation on publishing.

Want to play around before you dig in? Check out our LIVE Demo

Setup

Requirements:

Steps:

  1. Fork this repository
  2. Clone your forked repository (your origin)
  • git clone git@github.com:YOUR_GITHUB_USERNAME/Viewers.git
  1. Add OHIF/Viewers as a remote repository (the upstream)
  • git remote add upstream git@github.com:OHIF/Viewers.git

Developing Locally

In your cloned repository's root folder, run:

// Restore dependencies
yarn install

// Stands up local server to host Viewer.
// Viewer connects to our public cloud PACS by default
yarn start

For more advanced local development scenarios, like using your own locally hosted PACS and test data, check out our Essential: Getting Started guide.

E2E Tests

Using Cypress to create End-to-End tests and check whether the application flow is performing correctly, ensuring that the integrated components are working as expected.

Why Cypress?

Cypress is a next generation front end testing tool built for the modern web. With Cypress is easy to set up, write, run and debug tests

It allow us to write different types of tests:

  • End-to-End tests
  • Integration tests
  • Unit tets

All tests must be in ./cypress/integration folder.

Commands to run the tests:

// Open Cypress Dashboard that provides insight into what happened when your tests ran
yarn run cy

// Run all tests using Electron browser headless
yarn run cy:run

// Run all tests in CI mode
yarn run cy:run:ci

Contributing

Large portions of the Viewer's functionality are maintained in other repositories. To get a better understanding of the Viewer's architecture and "where things live", read our docs on the Viewer's architecture

It is notoriously difficult to setup multiple dependent repositories for end-to-end testing and development. That's why we recommend writing and running unit tests when adding and modifying features. This allows us to program in isolation without a complex setup, and has the added benefit of producing well-tested business logic.

  1. Clone this repository
  2. Navigate to the project directory, and yarn install
  3. To begin making changes, yarn run dev
  4. To commit changes, run yarn run cm

When creating tests, place the test file "next to" the file you're testing. For example:

// File
index.js;

// Test for file
index.test.js;

As you add and modify code, jest will watch for uncommitted changes and run your tests, reporting the results to your terminal. Make a pull request with your changes to master, and a core team member will review your work. If you have any questions, please don't hesitate to reach out via a GitHub issue.

Contributors

Thanks goes to these wonderful people (emoji key):

Erik Ziegler
Erik Ziegler

💻 🚇
Evren Ozkan
Evren Ozkan

💻
Gustavo André Lelis
Gustavo André Lelis

💻
Danny Brown
Danny Brown

💻 🚇
allcontributors[bot]
allcontributors[bot]

📖
Esref Durna
Esref Durna

💬
diego0020
diego0020

💻
David Wire
David Wire

💻
João Felipe de Medeiros Moreira
João Felipe de Medeiros Moreira

⚠️

This project follows the all-contributors specification. Contributions of any kind welcome!

License

MIT © OHIF