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Revert "feat: Add extensibility for tmtv and segmentation modes"

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This reverts commit 84c7d17b13.
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Bill Wallace 2026-07-08 14:11:24 -04:00
parent 84c7d17b13
commit 1b6fa2194e
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22 changed files with 887 additions and 1200 deletions
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27
README.md
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@ -244,32 +244,6 @@ also supports a number of commands that can be found in their respective
\* - For more information on different builds, check out our [Deploy
Docs][deployment-docs]
### Which config each command uses
The dev server and the production build select a different default
[configuration file][config-file] when `APP_CONFIG` is not set explicitly:
| Command | Default config | Data sources | `?customization=` |
| ------------------------------- | -------------------- | ------------ | ----------------- |
| `dev`, `dev:fast`, `start` | `config/dev.js` | Full set | Enabled |
| `build` | `config/default.js` | One demo source | Disabled |
- **`config/dev.js`** is the full-featured local-development config: every data
source is enabled, the `?customization=` URL feature is turned on (via
`customizationUrlPrefixes`), and it is kept at parity with the public demo
(`config/netlify.js`) so customizations behave locally the same way they do on
the demo.
- **`config/netlify.js`** is the public demo / Netlify deploy config
(`build:viewer:ci`), with the same full data-source set and `?customization=`
enabled.
- **`config/default.js`** is a locked-down baseline and is now **only** the
default for a plain production build (`build` with no `APP_CONFIG`): a single
read-only demo data source and `?customization=` off.
Any explicit `APP_CONFIG` overrides the default, e.g.
`APP_CONFIG=config/default.js pnpm run dev` or
`APP_CONFIG=config/netlify.js pnpm run build`.
## Project
The OHIF Medical Image Viewing Platform is maintained as a
@ -397,7 +371,6 @@ MIT © [OHIF](https://github.com/OHIF)
[ohif-architecture]: https://docs.ohif.org/architecture/index.html
[ohif-extensions]: https://docs.ohif.org/architecture/index.html
[deployment-docs]: https://docs.ohif.org/deployment/
[config-file]: https://docs.ohif.org/configuration/configurationFiles
[react-url]: https://reactjs.org/
[pwa-url]: https://developers.google.com/web/progressive-web-apps/
[ohif-viewer-url]: https://www.npmjs.com/package/@ohif/app

200
extensions/cornerstone/src/customizations/toolGroupToolsCustomization.ts
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@ -1,200 +0,0 @@
import { toolNames } from '../initCornerstoneTools';
import {
MIN_SEGMENTATION_DRAWING_RADIUS,
MAX_SEGMENTATION_DRAWING_RADIUS,
} from './segmentationToolbarCustomization';
/**
* Reusable tool group "capability blocks", registered as default
* customizations so modes and `?customization=` JSON modules can add them to
* a tool group by name via a mode's `toolGroupAdditions` customization, e.g.
*
* "basic.toolGroupAdditions": {
* "default": { "$push": ["cornerstone.segmentationToolGroupTools"] }
* }
*
* Each block is a `{ active/passive/enabled/disabled }` object suitable for
* `toolGroupService.addToolsToToolGroup`.
*/
function getToolGroupToolsCustomization({ commandsManager }) {
const brushInstances = [
{
toolName: 'CircularBrush',
parentTool: 'Brush',
configuration: {
activeStrategy: 'FILL_INSIDE_CIRCLE',
minRadius: MIN_SEGMENTATION_DRAWING_RADIUS,
maxRadius: MAX_SEGMENTATION_DRAWING_RADIUS,
},
},
{
toolName: 'CircularEraser',
parentTool: 'Brush',
configuration: {
activeStrategy: 'ERASE_INSIDE_CIRCLE',
minRadius: MIN_SEGMENTATION_DRAWING_RADIUS,
maxRadius: MAX_SEGMENTATION_DRAWING_RADIUS,
},
},
{
toolName: 'SphereBrush',
parentTool: 'Brush',
configuration: {
activeStrategy: 'FILL_INSIDE_SPHERE',
minRadius: MIN_SEGMENTATION_DRAWING_RADIUS,
maxRadius: MAX_SEGMENTATION_DRAWING_RADIUS,
},
},
{
toolName: 'SphereEraser',
parentTool: 'Brush',
configuration: {
activeStrategy: 'ERASE_INSIDE_SPHERE',
minRadius: MIN_SEGMENTATION_DRAWING_RADIUS,
maxRadius: MAX_SEGMENTATION_DRAWING_RADIUS,
},
},
{
toolName: 'ThresholdCircularBrush',
parentTool: 'Brush',
configuration: {
activeStrategy: 'THRESHOLD_INSIDE_CIRCLE',
minRadius: MIN_SEGMENTATION_DRAWING_RADIUS,
maxRadius: MAX_SEGMENTATION_DRAWING_RADIUS,
},
},
{
toolName: 'ThresholdSphereBrush',
parentTool: 'Brush',
configuration: {
activeStrategy: 'THRESHOLD_INSIDE_SPHERE',
minRadius: MIN_SEGMENTATION_DRAWING_RADIUS,
maxRadius: MAX_SEGMENTATION_DRAWING_RADIUS,
},
},
{
toolName: 'ThresholdCircularBrushDynamic',
parentTool: 'Brush',
configuration: {
activeStrategy: 'THRESHOLD_INSIDE_CIRCLE',
minRadius: MIN_SEGMENTATION_DRAWING_RADIUS,
maxRadius: MAX_SEGMENTATION_DRAWING_RADIUS,
threshold: {
isDynamic: true,
dynamicRadius: 3,
},
},
},
{
toolName: 'ThresholdSphereBrushDynamic',
parentTool: 'Brush',
configuration: {
activeStrategy: 'THRESHOLD_INSIDE_SPHERE',
minRadius: MIN_SEGMENTATION_DRAWING_RADIUS,
maxRadius: MAX_SEGMENTATION_DRAWING_RADIUS,
threshold: {
isDynamic: true,
dynamicRadius: 3,
},
},
},
];
const splineInstances = [
{
toolName: 'CatmullRomSplineROI',
parentTool: toolNames.SplineContourSegmentation,
configuration: {
spline: {
type: 'CATMULLROM',
enableTwoPointPreview: true,
},
},
},
{
toolName: 'LinearSplineROI',
parentTool: toolNames.SplineContourSegmentation,
configuration: {
spline: {
type: 'LINEAR',
enableTwoPointPreview: true,
},
},
},
{
toolName: 'BSplineROI',
parentTool: toolNames.SplineContourSegmentation,
configuration: {
spline: {
type: 'BSPLINE',
enableTwoPointPreview: true,
},
},
},
];
return {
/**
* The segmentation editing tools (labelmap brushes/scissors and contour
* segmentation tools), matching the buttons in
* `cornerstone.segmentationToolbarButtons`.
*/
'cornerstone.segmentationToolGroupTools': {
passive: [
...brushInstances,
{ toolName: toolNames.LabelmapSlicePropagation },
{ toolName: toolNames.MarkerLabelmap },
{ toolName: toolNames.RegionSegmentPlus },
{ toolName: toolNames.LabelMapEditWithContourTool },
{ toolName: toolNames.SegmentSelect },
{ toolName: toolNames.CircleScissors },
{ toolName: toolNames.RectangleScissors },
{ toolName: toolNames.SphereScissors },
{ toolName: toolNames.LivewireContourSegmentation },
{ toolName: toolNames.SculptorTool },
...splineInstances,
],
},
/**
* The measurement/annotation tools, matching the `MeasurementTools`
* buttons in `cornerstone.toolbarButtons`. Useful for adding annotations
* to modes (such as segmentation) whose tool groups omit them.
*/
'cornerstone.annotationToolGroupTools': {
passive: [
{ toolName: toolNames.Length },
{
toolName: toolNames.ArrowAnnotate,
configuration: {
getTextCallback: (callback, eventDetails) => {
commandsManager.runCommand('arrowTextCallback', {
callback,
eventDetails,
});
},
changeTextCallback: (data, eventDetails, callback) => {
commandsManager.runCommand('arrowTextCallback', {
callback,
data,
eventDetails,
});
},
},
},
{ toolName: toolNames.Bidirectional },
{ toolName: toolNames.Probe },
{ toolName: toolNames.DragProbe },
{ toolName: toolNames.EllipticalROI },
{ toolName: toolNames.CircleROI },
{ toolName: toolNames.RectangleROI },
{ toolName: toolNames.Angle },
{ toolName: toolNames.CobbAngle },
{ toolName: toolNames.SplineROI },
{ toolName: toolNames.LivewireContour },
],
},
};
}
export default getToolGroupToolsCustomization;

21
extensions/cornerstone/src/customizations/toolbarButtonsCustomization.ts
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@ -794,27 +794,6 @@ export const toolbarSections = {
const toolbarButtonsCustomization = {
'cornerstone.toolbarButtons': toolbarButtons,
'cornerstone.toolbarSections': toolbarSections,
// What the basic (and longitudinal) mode reads by name. The list values may
// reference other customizations, so a `?customization=` module can extend a
// mode with an exported capability block by pushing its name, e.g.
// `"basic.toolbarButtons": { "$push": ["cornerstone.segmentationToolbarButtons"] }`.
'basic.toolbarButtons': ['cornerstone.toolbarButtons'],
'basic.toolbarSections': ['cornerstone.toolbarSections'],
// Extra tools layered onto the mode's tool groups after creation; entries
// reference tool blocks such as `cornerstone.segmentationToolGroupTools`.
'basic.toolGroupAdditions': {
default: [],
mpr: [],
SRToolGroup: [],
volume3d: [],
},
// Panel lists resolved by the basic mode's layout template.
'basic.leftPanels': ['@ohif/extension-default.panelModule.seriesList'],
'basic.rightPanels': [
'@ohif/extension-cornerstone.panelModule.panelSegmentation',
'@ohif/extension-cornerstone.panelModule.panelMeasurement',
],
};
export { toolbarButtons };

4
extensions/cornerstone/src/getCustomizationModule.tsx
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@ -9,8 +9,6 @@ import colorbarCustomization from './customizations/colorbarCustomization';
import modalityColorMapCustomization from './customizations/modalityColorMapCustomization';
import windowLevelPresetsCustomization from './customizations/windowLevelPresetsCustomization';
import toolbarButtonsCustomization from './customizations/toolbarButtonsCustomization';
import segmentationToolbarCustomization from './customizations/segmentationToolbarCustomization';
import getToolGroupToolsCustomization from './customizations/toolGroupToolsCustomization';
import miscCustomization from './customizations/miscCustomization';
import captureViewportModalCustomization from './customizations/captureViewportModalCustomization';
import viewportDownloadWarningCustomization from './customizations/viewportDownloadWarningCustomization';
@ -36,8 +34,6 @@ function getCustomizationModule({ commandsManager, servicesManager, extensionMan
...modalityColorMapCustomization,
...windowLevelPresetsCustomization,
...toolbarButtonsCustomization,
...segmentationToolbarCustomization,
...getToolGroupToolsCustomization({ commandsManager }),
...miscCustomization,
...captureViewportModalCustomization,
...viewportDownloadWarningCustomization,

15
extensions/measurement-tracking/src/getCustomizationModule.ts
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@ -4,20 +4,7 @@ export default function getCustomizationModule() {
return [
{
name: 'default',
value: {
...measurementTrackingPrompts,
// Panel lists resolved by the longitudinal mode's layout template;
// `?customization=` modules can replace them (e.g. to swap in the
// segmentation panels with editing tools).
'longitudinal.leftPanels': [
'@ohif/extension-measurement-tracking.panelModule.seriesList',
],
'longitudinal.rightPanels': [
'@ohif/extension-cornerstone.panelModule.panelSegmentation',
'@ohif/extension-measurement-tracking.panelModule.trackedMeasurements',
],
},
value: { ...measurementTrackingPrompts },
},
];
}

17
extensions/tmtv/src/getCustomizationModule.ts
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@ -1,17 +0,0 @@
import toolbarCustomization from './customizations/toolbarCustomization';
/**
* Registers the TMTV defaults (toolbar buttons/sections, tool group
* additions and panel lists) so the TMTV mode can reference them by name and
* `?customization=` modules can extend them.
*/
export default function getCustomizationModule() {
return [
{
name: 'default',
value: {
...toolbarCustomization,
},
},
];
}

4
extensions/tmtv/src/index.tsx
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@ -4,8 +4,6 @@ import getPanelModule from './getPanelModule';
import init from './init';
import commandsModule from './commandsModule';
import getToolbarModule from './getToolbarModule';
import getCustomizationModule from './getCustomizationModule';
import { toolGroupIds } from './toolGroupIds';
/**
*
@ -21,7 +19,6 @@ const tmtvExtension = {
getToolbarModule,
getPanelModule,
getHangingProtocolModule,
getCustomizationModule,
getCommandsModule({ servicesManager, commandsManager, extensionManager }) {
return commandsModule({
servicesManager,
@ -32,4 +29,3 @@ const tmtvExtension = {
};
export default tmtvExtension;
export { toolGroupIds };

14
extensions/tmtv/src/toolGroupIds.ts
View File

@ -1,14 +0,0 @@
/**
* The tool group ids used by the TMTV hanging protocols and mode. Defined in
* the extension so both the extension (hanging protocol viewports, toolbar
* buttons) and the mode (tool group creation) share one definition.
*/
export const toolGroupIds = {
CT: 'ctToolGroup',
PT: 'ptToolGroup',
Fusion: 'fusionToolGroup',
MIP: 'mipToolGroup',
default: 'default',
};
export default toolGroupIds;

98
modes/basic/src/index.tsx
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@ -2,11 +2,6 @@ import update from 'immutability-helper';
import { utils } from '@ohif/core';
import initToolGroups from './initToolGroups';
import {
applyToolGroupAdditions,
registerModeToolbar,
resolvePanelList,
} from './modeCustomization';
import { id } from './id';
const { structuredCloneWithFunctions } = utils;
@ -133,38 +128,41 @@ export function isValidMode({ modalities }) {
};
}
export function onModeEnter({ servicesManager, extensionManager, commandsManager }: withAppTypes) {
const {
measurementService,
toolbarService,
toolGroupService,
customizationService,
panelService,
segmentationService,
} = servicesManager.services;
export function onModeEnter({
servicesManager,
extensionManager,
commandsManager,
panelService,
segmentationService,
}: withAppTypes) {
const { measurementService, toolbarService, toolGroupService, customizationService } =
servicesManager.services;
measurementService.clearMeasurements();
// Init the mode's tool groups. The function is a mode instance property so
// extending modes can substitute their own tool group setup.
this.initToolGroups?.(extensionManager, toolGroupService, commandsManager);
// Init Default and SR ToolGroups
initToolGroups(extensionManager, toolGroupService, commandsManager);
// Toolbar buttons and layout are supplied as customization references
// (extensions register the defaults; `?customization=` modules can extend
// them) or as literal values for modes that define them inline.
registerModeToolbar({ toolbarService, customizationService }, this);
// Toolbar buttons and layout may be supplied either as a customization name
// (a string, resolved through the customization service so `?customization=`
// modules can extend the cornerstone-registered defaults) or as a literal
// value (the button array / sections object) for modes that define them inline.
const resolveToolbarCustomization = (value: unknown) =>
typeof value === 'string' ? customizationService.getCustomization(value) : value;
// Extra tools (e.g. segmentation editing tools added by a customization)
// are layered onto the tool groups created above.
applyToolGroupAdditions({ toolGroupService, customizationService }, this.toolGroupAdditions);
const toolbarButtons = resolveToolbarCustomization(this.toolbarButtons) as any;
const toolbarSections = (resolveToolbarCustomization(this.toolbarSections) ?? {}) as Record<
string,
string[]
>;
// Segmentation panel editing is disabled by default in this mode, but only
// when no global/mode customization has expressed a preference — a site
// customization (e.g. `segmentationEditing`) can enable it.
if (
!this.enableSegmentationEdit &&
!customizationService.hasCustomization('panelSegmentation.disableEditing')
) {
toolbarService.register(toolbarButtons);
for (const [key, section] of Object.entries(toolbarSections)) {
toolbarService.updateSection(key, section);
}
if (!this.enableSegmentationEdit) {
customizationService.setCustomizations({
'panelSegmentation.disableEditing': {
$set: true,
@ -228,12 +226,9 @@ export function onModeExit({ servicesManager }: withAppTypes) {
export const basicLayout = {
id: ohif.layout,
props: {
// Panel lists are customization names; the cornerstone extension registers
// the defaults and `?customization=` modules can replace them (e.g. to
// swap in the segmentation panels with editing tools).
leftPanels: 'basic.leftPanels',
leftPanels: [ohif.thumbnailList],
leftPanelResizable: true,
rightPanels: 'basic.rightPanels',
rightPanels: [cornerstone.segmentation, cornerstone.measurements],
rightPanelClosed: true,
rightPanelResizable: true,
viewports: [
@ -270,15 +265,8 @@ export const basicLayout = {
},
};
export function layoutTemplate({ servicesManager }: withAppTypes = {} as withAppTypes) {
const layout = structuredCloneWithFunctions(this.layoutInstance);
const customizationService = servicesManager?.services?.customizationService;
if (customizationService) {
const { props } = layout;
props.leftPanels = resolvePanelList(customizationService, props.leftPanels);
props.rightPanels = resolvePanelList(customizationService, props.rightPanels);
}
return layout;
export function layoutTemplate() {
return structuredCloneWithFunctions(this.layoutInstance);
}
export const basicRoute = {
@ -297,14 +285,10 @@ export const modeInstance = {
hide: false,
displayName: 'Non-Longitudinal Basic',
_activatePanelTriggersSubscriptions: [],
// Toolbar buttons/layout and tool group additions are referenced by
// customization name; the cornerstone extension registers the defaults and
// `?customization=` modules can extend them. onModeEnter resolves these
// names via the customization service.
toolbarSections: 'basic.toolbarSections',
toolGroupAdditions: 'basic.toolGroupAdditions',
// Tool group setup used by onModeEnter; extending modes can replace it.
initToolGroups,
// Toolbar buttons and layout are referenced by customization name; the
// cornerstone extension registers the defaults and `?customization=` modules
// can extend them. onModeEnter resolves these names via the customization service.
toolbarSections: 'cornerstone.toolbarSections',
/**
* Lifecycle hooks
@ -326,7 +310,7 @@ export const modeInstance = {
// general handler needs to come last. For this case, the dicomvideo must
// come first to remove video transfer syntax before ohif uses images
sopClassHandlers,
toolbarButtons: 'basic.toolbarButtons',
toolbarButtons: 'cornerstone.toolbarButtons',
enableSegmentationEdit: false,
nonModeModalities: NON_IMAGE_MODALITIES,
};
@ -352,9 +336,3 @@ export const mode = {
export default mode;
export { initToolGroups };
export {
applyToolGroupAdditions,
registerModeToolbar,
resolveCustomizationList,
resolvePanelList,
} from './modeCustomization';

124
modes/basic/src/modeCustomization.ts
View File

@ -1,124 +0,0 @@
/**
* Helpers for resolving mode configuration (toolbar buttons, toolbar sections,
* tool group additions and panel lists) through the customization service.
*
* The pattern: extensions register the default values as named customizations
* (at Default scope), modes reference those values by name, and site
* `?customization=` JSON modules extend or replace the named values with
* immutability-helper commands. Wherever a list is resolved, a string entry is
* treated as the name of another customization, so a JSON module can add a
* whole capability block that an extension exports (for example
* `$push: ['cornerstone.segmentationToolbarButtons']`) without having to
* restate its contents.
*/
/**
* Resolves a customization list value into a flat array of concrete values.
*
* The input may be:
* - a string: the name of a customization to resolve (recursively)
* - an array: each entry resolved recursively (strings are names, objects
* are literal values)
* - an object: a literal value, returned as a single-element array
*
* Names are only resolved once per call (repeats and cycles are skipped), so a
* capability block referenced from two places is applied a single time.
*/
export function resolveCustomizationList(
customizationService: AppTypes.CustomizationService,
value: unknown,
_seen = new Set<string>()
): any[] {
if (value === undefined || value === null) {
return [];
}
if (typeof value === 'string') {
if (_seen.has(value)) {
return [];
}
_seen.add(value);
const resolved = customizationService.getCustomization(value);
if (resolved === undefined) {
console.warn(`resolveCustomizationList: no customization registered for "${value}"`);
return [];
}
return resolveCustomizationList(customizationService, resolved, _seen);
}
if (Array.isArray(value)) {
return value.flatMap(entry => resolveCustomizationList(customizationService, entry, _seen));
}
return [value];
}
/**
* Registers a mode's toolbar from customization references.
*
* `toolbarButtons` resolves to a flat list of button definitions which are
* registered with the toolbar service. `toolbarSections` resolves to one or
* more `{ sectionKey: buttonIds[] }` objects which are shallow-merged in order
* (later values win per section) and applied with `updateSection`.
*/
export function registerModeToolbar(
{ toolbarService, customizationService },
{ toolbarButtons, toolbarSections }
): void {
const buttons = resolveCustomizationList(customizationService, toolbarButtons);
toolbarService.register(buttons);
const sections: Record<string, string[]> = Object.assign(
{},
...resolveCustomizationList(customizationService, toolbarSections)
);
for (const [key, section] of Object.entries(sections)) {
toolbarService.updateSection(key, section);
}
}
/**
* Adds extra tools to the tool groups a mode has already created.
*
* `toolGroupAdditions` is (the name of) an object mapping a tool group id to a
* list of tool blocks; each block is either a literal
* `{ active/passive/enabled/disabled }` object or the name of a customization
* holding one (for example `cornerstone.segmentationToolGroupTools`). Tool
* groups the mode did not create are skipped, so a single additions object can
* be shared between modes with different tool group sets.
*/
export function applyToolGroupAdditions(
{ toolGroupService, customizationService },
toolGroupAdditions
): void {
if (!toolGroupAdditions) {
return;
}
for (const additions of resolveCustomizationList(customizationService, toolGroupAdditions)) {
for (const [toolGroupId, toolBlocks] of Object.entries(additions)) {
if (!toolGroupService.getToolGroup(toolGroupId)) {
continue;
}
for (const tools of resolveCustomizationList(customizationService, toolBlocks)) {
toolGroupService.addToolsToToolGroup(toolGroupId, tools);
}
}
}
}
/**
* Resolves a layout panel list. Panel lists hold extension module ids (which
* are themselves strings), so unlike the list helpers above only the top-level
* value may be a customization name.
*/
export function resolvePanelList(
customizationService: AppTypes.CustomizationService,
panels: string | string[]
): string[] {
if (typeof panels !== 'string') {
return panels;
}
const resolved = customizationService.getCustomization(panels);
if (resolved === undefined) {
console.warn(`resolvePanelList: no customization registered for "${panels}"`);
return [];
}
return resolved as string[];
}

8
modes/longitudinal/src/index.ts
View File

@ -1,6 +1,6 @@
import i18n from 'i18next';
import { id } from './id';
import { initToolGroups,
import { initToolGroups, cornerstone,
ohif,
dicomsr,
dicomvideo,
@ -28,10 +28,8 @@ export const longitudinalInstance = {
id: ohif.layout,
props: {
...basicLayout.props,
// Panel lists are customization names; the measurement-tracking extension
// registers the defaults and `?customization=` modules can replace them.
leftPanels: 'longitudinal.leftPanels',
rightPanels: 'longitudinal.rightPanels',
leftPanels: [tracked.thumbnailList],
rightPanels: [cornerstone.segmentation, tracked.measurements],
viewports: [
{
namespace: tracked.viewport,

357
modes/segmentation/src/index.tsx
View File

@ -1,138 +1,249 @@
import { id } from './id';
import toolbarButtons from './toolbarButtons';
import initToolGroups from './initToolGroups';
import setUpAutoTabSwitchHandler from './utils/setUpAutoTabSwitchHandler';
import {
ohif,
cornerstone,
extensionDependencies,
dicomRT,
segmentation,
onModeEnter as basicOnModeEnter,
onModeExit as basicOnModeExit,
layoutTemplate,
modeFactory,
} from '@ohif/mode-basic';
import { ohif, cornerstone, extensionDependencies, dicomRT, segmentation } from '@ohif/mode-basic';
export * from './toolbarButtons';
/**
* Indicate this is a valid mode unless the studies ONLY contain modalities
* that segmentation cannot be performed on.
*/
export function isValidMode({ modalities }) {
const modalitiesArray = modalities.split('\\');
function modeFactory({ modeConfiguration }) {
const _unsubscriptions = [];
return {
valid:
modalitiesArray.length === 1 ? !['SM', 'ECG', 'OT', 'DOC'].includes(modalitiesArray[0]) : true,
description:
'The mode does not support studies that ONLY include the following modalities: SM, OT, DOC',
/**
* Mode ID, which should be unique among modes used by the viewer. This ID
* is used to identify the mode in the viewer's state.
*/
id,
routeName: 'segmentation',
/**
* Mode name, which is displayed in the viewer's UI in the workList, for the
* user to select the mode.
*/
displayName: 'Segmentation',
/**
* Runs when the Mode Route is mounted to the DOM. Usually used to initialize
* Services and other resources.
*/
onModeEnter: ({ servicesManager, extensionManager, commandsManager }: withAppTypes) => {
const {
measurementService,
toolbarService,
toolGroupService,
segmentationService,
viewportGridService,
panelService,
} = servicesManager.services;
measurementService.clearMeasurements();
// Init Default and SR ToolGroups
initToolGroups(extensionManager, toolGroupService, commandsManager);
toolbarService.register(toolbarButtons);
toolbarService.updateSection(toolbarService.sections.primary, [
'WindowLevel',
'Pan',
'Zoom',
'TrackballRotate',
'Capture',
'Layout',
'Crosshairs',
'MoreTools',
]);
toolbarService.updateSection(toolbarService.sections.viewportActionMenu.topLeft, [
'orientationMenu',
'dataOverlayMenu',
]);
toolbarService.updateSection(toolbarService.sections.viewportActionMenu.bottomMiddle, [
'AdvancedRenderingControls',
]);
toolbarService.updateSection('AdvancedRenderingControls', [
'windowLevelMenuEmbedded',
'voiManualControlMenu',
'Colorbar',
'opacityMenu',
'thresholdMenu',
]);
toolbarService.updateSection(toolbarService.sections.viewportActionMenu.topRight, [
'modalityLoadBadge',
'trackingStatus',
'navigationComponent',
]);
toolbarService.updateSection(toolbarService.sections.viewportActionMenu.bottomLeft, [
'windowLevelMenu',
]);
toolbarService.updateSection('MoreTools', [
'Reset',
'rotate-right',
'flipHorizontal',
'ReferenceLines',
'ImageOverlayViewer',
'StackScroll',
'invert',
'Cine',
'Magnify',
'TagBrowser',
]);
toolbarService.updateSection(toolbarService.sections.labelMapSegmentationToolbox, [
'LabelMapTools',
]);
toolbarService.updateSection(toolbarService.sections.contourSegmentationToolbox, [
'ContourTools',
]);
toolbarService.updateSection('LabelMapTools', [
'LabelmapSlicePropagation',
'BrushTools',
'MarkerLabelmap',
'RegionSegmentPlus',
'Shapes',
'LabelMapEditWithContour',
]);
toolbarService.updateSection('ContourTools', [
'PlanarFreehandContourSegmentationTool',
'SculptorTool',
'SplineContourSegmentationTool',
'LivewireContourSegmentationTool',
]);
toolbarService.updateSection(toolbarService.sections.labelMapSegmentationUtilities, [
'LabelMapUtilities',
]);
toolbarService.updateSection(toolbarService.sections.contourSegmentationUtilities, [
'ContourUtilities',
]);
toolbarService.updateSection('LabelMapUtilities', [
'InterpolateLabelmap',
'SegmentBidirectional',
]);
toolbarService.updateSection('ContourUtilities', [
'LogicalContourOperations',
'SimplifyContours',
'SmoothContours',
]);
toolbarService.updateSection('BrushTools', ['Brush', 'Eraser', 'Threshold']);
const { unsubscribeAutoTabSwitchEvents } = setUpAutoTabSwitchHandler({
segmentationService,
viewportGridService,
panelService,
});
_unsubscriptions.push(...unsubscribeAutoTabSwitchEvents);
},
onModeExit: ({ servicesManager }: withAppTypes) => {
const {
toolGroupService,
syncGroupService,
segmentationService,
cornerstoneViewportService,
uiDialogService,
uiModalService,
} = servicesManager.services;
_unsubscriptions.forEach(unsubscribe => unsubscribe());
_unsubscriptions.length = 0;
uiDialogService.hideAll();
uiModalService.hide();
toolGroupService.destroy();
syncGroupService.destroy();
segmentationService.destroy();
cornerstoneViewportService.destroy();
},
/** */
validationTags: {
study: [],
series: [],
},
/**
* A boolean return value that indicates whether the mode is valid for the
* modalities of the selected studies. Currently we don't have stack viewport
* segmentations and we should exclude them
*/
isValidMode: ({ modalities }) => {
// Don't show the mode if the selected studies have only one modality
// that is not supported by the mode
const modalitiesArray = modalities.split('\\');
return {
valid:
modalitiesArray.length === 1
? !['SM', 'ECG', 'OT', 'DOC'].includes(modalitiesArray[0])
: true,
description:
'The mode does not support studies that ONLY include the following modalities: SM, OT, DOC',
};
},
/**
* Mode Routes are used to define the mode's behavior. A list of Mode Route
* that includes the mode's path and the layout to be used. The layout will
* include the components that are used in the layout. For instance, if the
* default layoutTemplate is used (id: '@ohif/extension-default.layoutTemplateModule.viewerLayout')
* it will include the leftPanels, rightPanels, and viewports. However, if
* you define another layoutTemplate that includes a Footer for instance,
* you should provide the Footer component here too. Note: We use Strings
* to reference the component's ID as they are registered in the internal
* ExtensionManager. The template for the string is:
* `${extensionId}.{moduleType}.${componentId}`.
*/
routes: [
{
path: 'template',
layoutTemplate: ({ location, servicesManager }) => {
return {
id: ohif.layout,
props: {
leftPanels: [ohif.thumbnailList],
leftPanelResizable: true,
rightPanels: [
cornerstone.labelMapSegmentationPanel,
cornerstone.contourSegmentationPanel,
],
rightPanelResizable: true,
// leftPanelClosed: true,
viewports: [
{
namespace: cornerstone.viewport,
displaySetsToDisplay: [ohif.sopClassHandler],
},
{
namespace: segmentation.viewport,
displaySetsToDisplay: [segmentation.sopClassHandler],
},
{
namespace: dicomRT.viewport,
displaySetsToDisplay: [dicomRT.sopClassHandler],
},
],
},
};
},
},
],
/** List of extensions that are used by the mode */
extensions: extensionDependencies,
/** HangingProtocol used by the mode */
// Commented out to just use the most applicable registered hanging protocol
// The example is used for a grid layout to specify that as a preferred layout
hangingProtocol: ['@ohif/mnGrid'],
/** SopClassHandlers used by the mode */
sopClassHandlers: [ohif.sopClassHandler, segmentation.sopClassHandler, dicomRT.sopClassHandler],
};
}
/**
* Extends the basic mode enter with the segmentation panel auto tab switch
* handling (switching between labelmap/contour panels as segmentations of the
* relevant type become active).
*/
export function onModeEnter(ctx: withAppTypes) {
basicOnModeEnter.call(this, ctx);
const { segmentationService, viewportGridService, panelService } =
ctx.servicesManager.services;
const { unsubscribeAutoTabSwitchEvents } = setUpAutoTabSwitchHandler({
segmentationService,
viewportGridService,
panelService,
});
this._unsubscriptions.push(...unsubscribeAutoTabSwitchEvents);
}
export function onModeExit(ctx: withAppTypes) {
this._unsubscriptions.forEach(unsubscribe => unsubscribe());
this._unsubscriptions.length = 0;
basicOnModeExit.call(this, ctx);
}
export const segmentationLayout = {
id: ohif.layout,
props: {
// Panel lists are customization names; the cornerstone extension registers
// the defaults and `?customization=` modules can replace them.
leftPanels: 'segmentation.leftPanels',
leftPanelResizable: true,
rightPanels: 'segmentation.rightPanels',
rightPanelResizable: true,
viewports: [
{
namespace: cornerstone.viewport,
displaySetsToDisplay: [ohif.sopClassHandler],
},
{
namespace: segmentation.viewport,
displaySetsToDisplay: [segmentation.sopClassHandler],
},
{
namespace: dicomRT.viewport,
displaySetsToDisplay: [dicomRT.sopClassHandler],
},
],
},
};
export const segmentationRoute = {
path: 'template',
layoutTemplate,
layoutInstance: segmentationLayout,
};
export const modeInstance = {
id,
routeName: 'segmentation',
displayName: 'Segmentation',
_activatePanelTriggersSubscriptions: [],
_unsubscriptions: [],
// Toolbar buttons/layout and tool group additions are referenced by
// customization name; the cornerstone extension registers the defaults and
// `?customization=` modules can extend them (e.g. add new segmentation
// tools, remove defaults, or add the annotation tools).
toolbarButtons: 'segmentation.toolbarButtons',
toolbarSections: 'segmentation.toolbarSections',
toolGroupAdditions: 'segmentation.toolGroupAdditions',
// Tool group setup used by onModeEnter; extending modes can replace it.
initToolGroups,
// The segmentation panel is editable in this mode.
enableSegmentationEdit: true,
/**
* Lifecycle hooks
*/
onModeEnter,
onModeExit,
validationTags: {
study: [],
series: [],
},
isValidMode,
routes: [segmentationRoute],
extensions: extensionDependencies,
// Prefer the grid layout hanging protocol when applicable.
hangingProtocol: ['@ohif/mnGrid'],
sopClassHandlers: [ohif.sopClassHandler, segmentation.sopClassHandler, dicomRT.sopClassHandler],
};
/**
* The mode uses the basic mode's `modeFactory`, which applies
* immutability-helper commands from `modeConfiguration` onto `modeInstance`,
* so a site can define a `mySegmentation` mode that extends this one.
*/
const mode = {
id,
modeFactory,
modeInstance,
extensionDependencies,
};
export default mode;
export { initToolGroups };

502
extensions/cornerstone/src/customizations/segmentationToolbarCustomization.ts → modes/segmentation/src/toolbarButtons.ts
View File

@ -1,11 +1,8 @@
import type { Button } from '@ohif/core/types';
import { ViewportGridService, ToolbarService } from '@ohif/core';
import { ViewportGridService } from '@ohif/core';
import i18n from 'i18next';
const { TOOLBAR_SECTIONS } = ToolbarService;
export const MIN_SEGMENTATION_DRAWING_RADIUS = 0.5;
export const MAX_SEGMENTATION_DRAWING_RADIUS = 99.5;
import { MIN_SEGMENTATION_DRAWING_RADIUS, MAX_SEGMENTATION_DRAWING_RADIUS } from './constants';
const setToolActiveToolbar = {
commandName: 'setToolActiveToolbar',
@ -23,16 +20,155 @@ const callbacks = (toolName: string) => [
},
];
/**
* Segmentation editing toolbar buttons: the toolbox section containers plus
* the labelmap / contour editing tools and utilities. These complement the
* general buttons in `cornerstone.toolbarButtons`; together they are the
* default button set for the segmentation mode, and modes such as basic /
* longitudinal can pull them in via a customization (see
* `segmentationEditing.jsonc`).
*/
const segmentationToolbarButtons: Button[] = [
// section containers for the nested toolboxes and toolbars
export const toolbarButtons: Button[] = [
{
id: 'AdvancedRenderingControls',
uiType: 'ohif.advancedRenderingControls',
props: {
buttonSection: true,
},
},
{
id: 'modalityLoadBadge',
uiType: 'ohif.modalityLoadBadge',
props: {
icon: 'Status',
label: i18n.t('Buttons:Status'),
tooltip: i18n.t('Buttons:Status'),
evaluate: {
name: 'evaluate.modalityLoadBadge',
hideWhenDisabled: true,
},
},
},
{
id: 'navigationComponent',
uiType: 'ohif.navigationComponent',
props: {
icon: 'Navigation',
label: i18n.t('Buttons:Navigation'),
tooltip: i18n.t('Buttons:Navigate between segments/measurements and manage their visibility'),
evaluate: {
name: 'evaluate.navigationComponent',
hideWhenDisabled: true,
},
},
},
{
id: 'trackingStatus',
uiType: 'ohif.trackingStatus',
props: {
icon: 'TrackingStatus',
label: i18n.t('Buttons:Tracking Status'),
tooltip: i18n.t('Buttons:View and manage tracking status of measurements and annotations'),
evaluate: {
name: 'evaluate.trackingStatus',
hideWhenDisabled: true,
},
},
},
{
id: 'dataOverlayMenu',
uiType: 'ohif.dataOverlayMenu',
props: {
icon: 'ViewportViews',
label: i18n.t('Buttons:Data Overlay'),
tooltip: i18n.t(
'Buttons:Configure data overlay options and manage foreground/background display sets'
),
evaluate: 'evaluate.dataOverlayMenu',
},
},
{
id: 'orientationMenu',
uiType: 'ohif.orientationMenu',
props: {
icon: 'OrientationSwitch',
label: i18n.t('Buttons:Orientation'),
tooltip: i18n.t(
'Buttons:Change viewport orientation between axial, sagittal, coronal and reformat planes'
),
evaluate: {
name: 'evaluate.orientationMenu',
// hideWhenDisabled: true,
},
},
},
{
id: 'windowLevelMenuEmbedded',
uiType: 'ohif.windowLevelMenuEmbedded',
props: {
icon: 'WindowLevel',
label: i18n.t('Buttons:Window Level'),
tooltip: i18n.t('Buttons:Adjust window/level presets and customize image contrast settings'),
evaluate: {
name: 'evaluate.windowLevelMenuEmbedded',
hideWhenDisabled: true,
},
},
},
{
id: 'windowLevelMenu',
uiType: 'ohif.windowLevelMenu',
props: {
icon: 'WindowLevel',
label: i18n.t('Buttons:Window Level'),
tooltip: i18n.t('Buttons:Adjust window/level presets and customize image contrast settings'),
evaluate: 'evaluate.windowLevelMenu',
},
},
{
id: 'voiManualControlMenu',
uiType: 'ohif.voiManualControlMenu',
props: {
icon: 'WindowLevelAdvanced',
label: i18n.t('Buttons:Advanced Window Level'),
tooltip: i18n.t('Buttons:Advanced window/level settings with manual controls and presets'),
evaluate: 'evaluate.voiManualControlMenu',
},
},
{
id: 'thresholdMenu',
uiType: 'ohif.thresholdMenu',
props: {
icon: 'Threshold',
label: i18n.t('Buttons:Threshold'),
tooltip: i18n.t('Buttons:Image threshold settings'),
evaluate: {
name: 'evaluate.thresholdMenu',
hideWhenDisabled: true,
},
},
},
{
id: 'opacityMenu',
uiType: 'ohif.opacityMenu',
props: {
icon: 'Opacity',
label: i18n.t('Buttons:Opacity'),
tooltip: i18n.t('Buttons:Image opacity settings'),
evaluate: {
name: 'evaluate.opacityMenu',
hideWhenDisabled: true,
},
},
},
{
id: 'Colorbar',
uiType: 'ohif.colorbar',
props: {
type: 'tool',
label: i18n.t('Buttons:Colorbar'),
},
},
// sections
{
id: 'MoreTools',
uiType: 'ohif.toolButtonList',
props: {
buttonSection: true,
},
},
{
id: 'BrushTools',
uiType: 'ohif.toolBoxButtonGroup',
@ -40,6 +176,7 @@ const segmentationToolbarButtons: Button[] = [
buttonSection: true,
},
},
// Section containers for the nested toolboxes and toolbars.
{
id: 'LabelMapUtilities',
uiType: 'ohif.Toolbar',
@ -69,6 +206,215 @@ const segmentationToolbarButtons: Button[] = [
},
},
// tool defs
{
id: 'Zoom',
uiType: 'ohif.toolButton',
props: {
icon: 'tool-zoom',
label: i18n.t('Buttons:Zoom'),
commands: setToolActiveToolbar,
evaluate: 'evaluate.cornerstoneTool',
},
},
{
id: 'WindowLevel',
uiType: 'ohif.toolButton',
props: {
icon: 'tool-window-level',
label: i18n.t('Buttons:Window Level'),
commands: setToolActiveToolbar,
evaluate: 'evaluate.cornerstoneTool',
},
},
{
id: 'Pan',
uiType: 'ohif.toolButton',
props: {
icon: 'tool-move',
label: i18n.t('Buttons:Pan'),
commands: setToolActiveToolbar,
evaluate: 'evaluate.cornerstoneTool',
},
},
{
id: 'TrackballRotate',
uiType: 'ohif.toolButton',
props: {
type: 'tool',
icon: 'tool-3d-rotate',
label: i18n.t('Buttons:3D Rotate'),
commands: setToolActiveToolbar,
evaluate: {
name: 'evaluate.cornerstoneTool',
disabledText: i18n.t('Buttons:Select a 3D viewport to enable this tool'),
},
},
},
{
id: 'Capture',
uiType: 'ohif.toolButton',
props: {
icon: 'tool-capture',
label: i18n.t('Buttons:Capture'),
commands: 'showDownloadViewportModal',
evaluate: [
'evaluate.action',
{
name: 'evaluate.viewport.supported',
unsupportedViewportTypes: ['video', 'wholeSlide'],
},
],
},
},
{
id: 'Layout',
uiType: 'ohif.layoutSelector',
props: {
rows: 3,
columns: 4,
evaluate: 'evaluate.action',
commands: 'setViewportGridLayout',
},
},
{
id: 'Crosshairs',
uiType: 'ohif.toolButton',
props: {
icon: 'tool-crosshair',
label: i18n.t('Buttons:Crosshairs'),
commands: {
commandName: 'setToolActiveToolbar',
commandOptions: {
toolGroupIds: ['mpr'],
},
},
evaluate: {
name: 'evaluate.cornerstoneTool',
disabledText: i18n.t('Buttons:Select an MPR viewport to enable this tool'),
},
},
},
{
id: 'Reset',
uiType: 'ohif.toolButton',
props: {
icon: 'tool-reset',
label: i18n.t('Buttons:Reset View'),
tooltip: i18n.t('Buttons:Reset View'),
commands: 'resetViewport',
evaluate: 'evaluate.action',
},
},
{
id: 'rotate-right',
uiType: 'ohif.toolButton',
props: {
icon: 'tool-rotate-right',
label: i18n.t('Buttons:Rotate Right'),
tooltip: i18n.t('Buttons:Rotate +90'),
commands: 'rotateViewportCW',
evaluate: 'evaluate.action',
},
},
{
id: 'flipHorizontal',
uiType: 'ohif.toolButton',
props: {
icon: 'tool-flip-horizontal',
label: i18n.t('Buttons:Flip Horizontal'),
tooltip: i18n.t('Buttons:Flip Horizontally'),
commands: 'flipViewportHorizontal',
evaluate: [
'evaluate.viewportProperties.toggle',
{
name: 'evaluate.viewport.supported',
unsupportedViewportTypes: ['volume3d'],
},
],
},
},
{
id: 'ReferenceLines',
uiType: 'ohif.toolButton',
props: {
icon: 'tool-referenceLines',
label: i18n.t('Buttons:Reference Lines'),
tooltip: i18n.t('Buttons:Show Reference Lines'),
commands: 'toggleEnabledDisabledToolbar',
evaluate: 'evaluate.cornerstoneTool.toggle',
},
},
{
id: 'ImageOverlayViewer',
uiType: 'ohif.toolButton',
props: {
icon: 'toggle-dicom-overlay',
label: i18n.t('Buttons:Image Overlay'),
tooltip: i18n.t('Buttons:Toggle Image Overlay'),
commands: 'toggleEnabledDisabledToolbar',
evaluate: 'evaluate.cornerstoneTool.toggle',
},
},
{
id: 'StackScroll',
uiType: 'ohif.toolButton',
props: {
icon: 'tool-stack-scroll',
label: i18n.t('Buttons:Stack Scroll'),
tooltip: i18n.t('Buttons:Stack Scroll'),
commands: setToolActiveToolbar,
evaluate: 'evaluate.cornerstoneTool',
},
},
{
id: 'invert',
uiType: 'ohif.toolButton',
props: {
icon: 'tool-invert',
label: i18n.t('Buttons:Invert'),
tooltip: i18n.t('Buttons:Invert Colors'),
commands: 'invertViewport',
evaluate: 'evaluate.viewportProperties.toggle',
},
},
{
id: 'Cine',
uiType: 'ohif.toolButton',
props: {
icon: 'tool-cine',
label: i18n.t('Buttons:Cine'),
tooltip: i18n.t('Buttons:Cine'),
commands: 'toggleCine',
evaluate: [
'evaluate.cine',
{
name: 'evaluate.viewport.supported',
unsupportedViewportTypes: ['volume3d'],
},
],
},
},
{
id: 'Magnify',
uiType: 'ohif.toolButton',
props: {
icon: 'tool-magnify',
label: i18n.t('Buttons:Zoom-in'),
tooltip: i18n.t('Buttons:Zoom-in'),
commands: setToolActiveToolbar,
evaluate: 'evaluate.cornerstoneTool',
},
},
{
id: 'TagBrowser',
uiType: 'ohif.toolButton',
props: {
icon: 'dicom-tag-browser',
label: i18n.t('Buttons:Dicom Tag Browser'),
tooltip: i18n.t('Buttons:Dicom Tag Browser'),
commands: 'openDICOMTagViewer',
},
},
{
id: 'PlanarFreehandContourSegmentationTool',
uiType: 'ohif.toolBoxButton',
@ -213,11 +559,7 @@ const segmentationToolbarButtons: Button[] = [
value: 'CatmullRomSplineROI',
label: i18n.t('Buttons:Catmull Rom Spline'),
},
{
id: 'LinearSplineROI',
value: 'LinearSplineROI',
label: i18n.t('Buttons:Linear Spline'),
},
{ id: 'LinearSplineROI', value: 'LinearSplineROI', label: i18n.t('Buttons:Linear Spline') },
{ id: 'BSplineROI', value: 'BSplineROI', label: i18n.t('Buttons:B-Spline') },
],
commands: {
@ -853,122 +1195,4 @@ const segmentationToolbarButtons: Button[] = [
},
];
/**
* The toolbox / utilities section wiring for segmentation editing. These are
* the sections rendered by the `panelSegmentationWithTools*` panels, so any
* mode that shows those panels can merge this block into its toolbar sections.
*/
export const segmentationToolboxSections: Record<string, string[]> = {
[TOOLBAR_SECTIONS.labelMapSegmentationToolbox]: ['LabelMapTools'],
[TOOLBAR_SECTIONS.contourSegmentationToolbox]: ['ContourTools'],
[TOOLBAR_SECTIONS.labelMapSegmentationUtilities]: ['LabelMapUtilities'],
[TOOLBAR_SECTIONS.contourSegmentationUtilities]: ['ContourUtilities'],
LabelMapTools: [
'LabelmapSlicePropagation',
'BrushTools',
'MarkerLabelmap',
'RegionSegmentPlus',
'Shapes',
'LabelMapEditWithContour',
],
ContourTools: [
'PlanarFreehandContourSegmentationTool',
'SculptorTool',
'SplineContourSegmentationTool',
'LivewireContourSegmentationTool',
],
LabelMapUtilities: ['InterpolateLabelmap', 'SegmentBidirectional'],
ContourUtilities: ['LogicalContourOperations', 'SimplifyContours', 'SmoothContours'],
BrushTools: ['Brush', 'Eraser', 'Threshold'],
};
/**
* The segmentation mode's main toolbar layout (primary bar and viewport
* action corners). Kept separate from the toolbox wiring above so other modes
* can adopt segmentation editing without adopting this mode layout.
*/
export const segmentationModeToolbarSections: Record<string, string[]> = {
[TOOLBAR_SECTIONS.primary]: [
'WindowLevel',
'Pan',
'Zoom',
'TrackballRotate',
'Capture',
'Layout',
'Crosshairs',
'MoreTools',
],
[TOOLBAR_SECTIONS.viewportActionMenu.topLeft]: ['orientationMenu', 'dataOverlayMenu'],
[TOOLBAR_SECTIONS.viewportActionMenu.bottomMiddle]: ['AdvancedRenderingControls'],
AdvancedRenderingControls: [
'windowLevelMenuEmbedded',
'voiManualControlMenu',
'Colorbar',
'opacityMenu',
'thresholdMenu',
],
[TOOLBAR_SECTIONS.viewportActionMenu.topRight]: [
'modalityLoadBadge',
'trackingStatus',
'navigationComponent',
],
[TOOLBAR_SECTIONS.viewportActionMenu.bottomLeft]: ['windowLevelMenu'],
MoreTools: [
'Reset',
'rotate-right',
'flipHorizontal',
'ReferenceLines',
'ImageOverlayViewer',
'StackScroll',
'invert',
'Cine',
'Magnify',
'TagBrowser',
],
};
/**
* Customizations registered (at default scope) by the cornerstone extension:
* - `cornerstone.segmentationToolbarButtons` – segmentation editing button definitions
* - `cornerstone.segmentationToolbarSections` – toolbox/utilities section wiring
* - `cornerstone.segmentationModeToolbarSections` – the segmentation mode's toolbar layout
* - `segmentation.*` – what the segmentation mode reads by name; lists may
* reference other customizations, so `?customization=` modules can extend
* them by pushing names of exported capability blocks.
*/
const segmentationToolbarCustomization = {
'cornerstone.segmentationToolbarButtons': segmentationToolbarButtons,
'cornerstone.segmentationToolbarSections': segmentationToolboxSections,
'cornerstone.segmentationModeToolbarSections': segmentationModeToolbarSections,
'segmentation.toolbarButtons': [
'cornerstone.toolbarButtons',
'cornerstone.segmentationToolbarButtons',
],
'segmentation.toolbarSections': [
'cornerstone.segmentationModeToolbarSections',
'cornerstone.segmentationToolbarSections',
],
'segmentation.toolGroupAdditions': {
default: [],
mpr: [],
volume3d: [],
},
'segmentation.leftPanels': ['@ohif/extension-default.panelModule.seriesList'],
'segmentation.rightPanels': [
'@ohif/extension-cornerstone.panelModule.panelSegmentationWithToolsLabelMap',
'@ohif/extension-cornerstone.panelModule.panelSegmentationWithToolsContour',
],
};
export { segmentationToolbarButtons };
export default segmentationToolbarCustomization;
export default toolbarButtons;

4
modes/tmtv/package.json
View File

@ -35,9 +35,7 @@
"@ohif/extension-default": "workspace:*",
"@ohif/extension-dicom-pdf": "workspace:*",
"@ohif/extension-dicom-video": "workspace:*",
"@ohif/extension-measurement-tracking": "workspace:*",
"@ohif/extension-tmtv": "workspace:*",
"@ohif/mode-basic": "workspace:*"
"@ohif/extension-measurement-tracking": "workspace:*"
},
"dependencies": {
"@babel/runtime": "7.29.7",

438
modes/tmtv/src/index.ts
View File

@ -1,38 +1,32 @@
import { classes } from '@ohif/core';
import {
applyToolGroupAdditions,
layoutTemplate,
modeFactory,
registerModeToolbar,
} from '@ohif/mode-basic';
import i18n from 'i18next';
import toolbarButtons from './toolbarButtons';
import { id } from './id.js';
import initToolGroups from './initToolGroups.js';
import setCrosshairsConfiguration from './utils/setCrosshairsConfiguration.js';
import setFusionActiveVolume from './utils/setFusionActiveVolume.js';
import i18n from 'i18next';
const { MetadataProvider } = classes;
export const ohif = {
const ohif = {
layout: '@ohif/extension-default.layoutTemplateModule.viewerLayout',
sopClassHandler: '@ohif/extension-default.sopClassHandlerModule.stack',
thumbnailList: '@ohif/extension-default.panelModule.seriesList',
};
export const cs3d = {
const cs3d = {
viewport: '@ohif/extension-cornerstone.viewportModule.cornerstone',
segPanel: '@ohif/extension-cornerstone.panelModule.panelSegmentationNoHeader',
measurements: '@ohif/extension-cornerstone.panelModule.measurements',
};
export const tmtv = {
const tmtv = {
hangingProtocol: '@ohif/extension-tmtv.hangingProtocolModule.ptCT',
petSUV: '@ohif/extension-tmtv.panelModule.petSUV',
tmtv: '@ohif/extension-tmtv.panelModule.tmtv',
};
export const extensionDependencies = {
const extensionDependencies = {
// Can derive the versions at least process.env.from npm_package_version
'@ohif/extension-default': '^3.0.0',
'@ohif/extension-cornerstone': '^3.0.0',
@ -40,214 +34,234 @@ export const extensionDependencies = {
'@ohif/extension-tmtv': '^3.0.0',
};
export function onModeEnter({ servicesManager, extensionManager, commandsManager }: withAppTypes) {
const {
toolbarService,
toolGroupService,
customizationService,
hangingProtocolService,
displaySetService,
} = servicesManager.services;
const utilityModule = extensionManager.getModuleEntry(
'@ohif/extension-cornerstone.utilityModule.tools'
);
const { toolNames, Enums } = utilityModule.exports;
// Init Default and SR ToolGroups
this.initToolGroups?.(toolNames, Enums, toolGroupService, commandsManager);
const { unsubscribe } = toolGroupService.subscribe(
toolGroupService.EVENTS.VIEWPORT_ADDED,
() => {
// For fusion toolGroup we need to add the volumeIds for the crosshairs
// since in the fusion viewport we don't want both PT and CT to render MIP
// when slabThickness is modified
const { displaySetMatchDetails } = hangingProtocolService.getMatchDetails();
setCrosshairsConfiguration(
displaySetMatchDetails,
toolNames,
toolGroupService,
displaySetService
);
setFusionActiveVolume(
displaySetMatchDetails,
toolNames,
toolGroupService,
displaySetService
);
}
);
this._unsubscriptions.push(unsubscribe);
// Toolbar buttons and layout are supplied as customization references (the
// tmtv extension registers the defaults; `?customization=` modules can
// extend them) or as literal values for modes that define them inline.
registerModeToolbar({ toolbarService, customizationService }, this);
// Extra tools (e.g. annotation tools added by a customization) are layered
// onto the tool groups created above.
applyToolGroupAdditions({ toolGroupService, customizationService }, this.toolGroupAdditions);
customizationService.setCustomizations({
'panelSegmentation.tableMode': {
$set: 'expanded',
},
'panelSegmentation.onSegmentationAdd': {
$set: () => {
commandsManager.run('createNewLabelmapFromPT');
},
},
});
// For the hanging protocol we need to decide on the window level
// based on whether the SUV is corrected or not, hence we can't hard
// code the window level in the hanging protocol but we add a custom
// attribute to the hanging protocol that will be used to get the
// window level based on the metadata
hangingProtocolService.addCustomAttribute(
'getPTVOIRange',
'get PT VOI based on corrected or not',
props => {
const ptDisplaySet = props.find(imageSet => imageSet.Modality === 'PT');
if (!ptDisplaySet) {
return;
}
const { imageId } = ptDisplaySet.images[0];
const imageIdScalingFactor = MetadataProvider.get('scalingModule', imageId);
const isSUVAvailable = imageIdScalingFactor && imageIdScalingFactor.suvbw;
if (isSUVAvailable) {
return {
windowWidth: 5,
windowCenter: 2.5,
};
}
return;
}
);
}
export function onModeExit({ servicesManager }: withAppTypes) {
const {
toolGroupService,
syncGroupService,
segmentationService,
cornerstoneViewportService,
uiDialogService,
uiModalService,
} = servicesManager.services;
this._unsubscriptions.forEach(unsubscribe => unsubscribe());
this._unsubscriptions.length = 0;
uiDialogService.hideAll();
uiModalService.hide();
toolGroupService.destroy();
syncGroupService.destroy();
segmentationService.destroy();
cornerstoneViewportService.destroy();
}
export function isValidMode({ modalities, study }) {
const modalities_list = modalities.split('\\');
const invalidModalities = ['SM'];
const isValid =
modalities_list.includes('CT') &&
study.mrn !== 'M1' &&
modalities_list.includes('PT') &&
!invalidModalities.some(modality => modalities_list.includes(modality)) &&
// This is study is a 4D study with PT and CT and not a 3D study for the tmtv
// mode, until we have a better way to identify 4D studies we will use the
// StudyInstanceUID to identify the study
// Todo: when we add the 4D mode which comes with a mechanism to identify
// 4D studies we can use that
study.studyInstanceUid !== '1.3.6.1.4.1.12842.1.1.14.3.20220915.105557.468.2963630849';
// there should be both CT and PT modalities and the modality should not be SM
const unsubscriptions = [];
function modeFactory({ modeConfiguration }) {
return {
valid: isValid,
description: 'The mode requires both PT and CT series in the study',
// TODO: We're using this as a route segment
// We should not be.
id,
routeName: 'tmtv',
displayName: i18n.t('Modes:Total Metabolic Tumor Volume'),
/**
* Lifecycle hooks
*/
onModeEnter: ({ servicesManager, extensionManager, commandsManager }: withAppTypes) => {
const {
toolbarService,
toolGroupService,
customizationService,
hangingProtocolService,
displaySetService,
} = servicesManager.services;
const utilityModule = extensionManager.getModuleEntry(
'@ohif/extension-cornerstone.utilityModule.tools'
);
const { toolNames, Enums } = utilityModule.exports;
// Init Default and SR ToolGroups
initToolGroups(toolNames, Enums, toolGroupService, commandsManager);
const { unsubscribe } = toolGroupService.subscribe(
toolGroupService.EVENTS.VIEWPORT_ADDED,
() => {
// For fusion toolGroup we need to add the volumeIds for the crosshairs
// since in the fusion viewport we don't want both PT and CT to render MIP
// when slabThickness is modified
const { displaySetMatchDetails } = hangingProtocolService.getMatchDetails();
setCrosshairsConfiguration(
displaySetMatchDetails,
toolNames,
toolGroupService,
displaySetService
);
setFusionActiveVolume(
displaySetMatchDetails,
toolNames,
toolGroupService,
displaySetService
);
}
);
unsubscriptions.push(unsubscribe);
toolbarService.register(toolbarButtons);
toolbarService.updateSection(toolbarService.sections.primary, [
'MeasurementTools',
'Zoom',
'Pan',
'WindowLevel',
'Crosshairs',
]);
toolbarService.updateSection(toolbarService.sections.viewportActionMenu.topLeft, [
'orientationMenu',
'dataOverlayMenu',
]);
toolbarService.updateSection(toolbarService.sections.viewportActionMenu.bottomMiddle, [
'AdvancedRenderingControls',
]);
toolbarService.updateSection('AdvancedRenderingControls', [
'windowLevelMenuEmbedded',
'voiManualControlMenu',
'Colorbar',
'opacityMenu',
'thresholdMenu',
]);
toolbarService.updateSection(toolbarService.sections.viewportActionMenu.topRight, [
'modalityLoadBadge',
'trackingStatus',
'navigationComponent',
]);
toolbarService.updateSection(toolbarService.sections.viewportActionMenu.bottomLeft, [
'windowLevelMenu',
]);
toolbarService.updateSection('MeasurementTools', [
'Length',
'Bidirectional',
'ArrowAnnotate',
'EllipticalROI',
]);
toolbarService.updateSection('ROIThresholdToolbox', ['SegmentationTools']);
toolbarService.updateSection('SegmentationTools', [
'RectangleROIStartEndThreshold',
'BrushTools',
]);
toolbarService.updateSection('BrushTools', ['Brush', 'Eraser', 'Threshold']);
customizationService.setCustomizations({
'panelSegmentation.tableMode': {
$set: 'expanded',
},
'panelSegmentation.onSegmentationAdd': {
$set: () => {
commandsManager.run('createNewLabelmapFromPT');
},
},
});
// For the hanging protocol we need to decide on the window level
// based on whether the SUV is corrected or not, hence we can't hard
// code the window level in the hanging protocol but we add a custom
// attribute to the hanging protocol that will be used to get the
// window level based on the metadata
hangingProtocolService.addCustomAttribute(
'getPTVOIRange',
'get PT VOI based on corrected or not',
props => {
const ptDisplaySet = props.find(imageSet => imageSet.Modality === 'PT');
if (!ptDisplaySet) {
return;
}
const { imageId } = ptDisplaySet.images[0];
const imageIdScalingFactor = MetadataProvider.get('scalingModule', imageId);
const isSUVAvailable = imageIdScalingFactor && imageIdScalingFactor.suvbw;
if (isSUVAvailable) {
return {
windowWidth: 5,
windowCenter: 2.5,
};
}
return;
}
);
},
onModeExit: ({ servicesManager }: withAppTypes) => {
const {
toolGroupService,
syncGroupService,
segmentationService,
cornerstoneViewportService,
uiDialogService,
uiModalService,
} = servicesManager.services;
unsubscriptions.forEach(unsubscribe => unsubscribe());
uiDialogService.hideAll();
uiModalService.hide();
toolGroupService.destroy();
syncGroupService.destroy();
segmentationService.destroy();
cornerstoneViewportService.destroy();
},
validationTags: {
study: [],
series: [],
},
isValidMode: ({ modalities, study }) => {
const modalities_list = modalities.split('\\');
const invalidModalities = ['SM'];
const isValid =
modalities_list.includes('CT') &&
study.mrn !== 'M1' &&
modalities_list.includes('PT') &&
!invalidModalities.some(modality => modalities_list.includes(modality)) &&
// This is study is a 4D study with PT and CT and not a 3D study for the tmtv
// mode, until we have a better way to identify 4D studies we will use the
// StudyInstanceUID to identify the study
// Todo: when we add the 4D mode which comes with a mechanism to identify
// 4D studies we can use that
study.studyInstanceUid !== '1.3.6.1.4.1.12842.1.1.14.3.20220915.105557.468.2963630849';
// there should be both CT and PT modalities and the modality should not be SM
return {
valid: isValid,
description: 'The mode requires both PT and CT series in the study',
};
},
routes: [
{
path: 'tmtv',
/*init: ({ servicesManager, extensionManager }) => {
//defaultViewerRouteInit
},*/
layoutTemplate: () => {
return {
id: ohif.layout,
props: {
leftPanels: [ohif.thumbnailList],
leftPanelResizable: true,
leftPanelClosed: true,
rightPanels: [tmtv.tmtv, tmtv.petSUV],
rightPanelResizable: true,
viewports: [
{
namespace: cs3d.viewport,
displaySetsToDisplay: [ohif.sopClassHandler],
},
],
},
};
},
},
],
extensions: extensionDependencies,
hangingProtocol: tmtv.hangingProtocol,
sopClassHandlers: [ohif.sopClassHandler],
...modeConfiguration,
};
}
export const tmtvLayout = {
id: ohif.layout,
props: {
// Panel lists are customization names; the tmtv extension registers the
// defaults and `?customization=` modules can replace them.
leftPanels: 'tmtv.leftPanels',
leftPanelResizable: true,
leftPanelClosed: true,
rightPanels: 'tmtv.rightPanels',
rightPanelResizable: true,
viewports: [
{
namespace: cs3d.viewport,
displaySetsToDisplay: [ohif.sopClassHandler],
},
],
},
};
export const tmtvRoute = {
path: 'tmtv',
layoutTemplate,
layoutInstance: tmtvLayout,
};
export const modeInstance = {
// TODO: We're using this as a route segment
// We should not be.
id,
routeName: 'tmtv',
displayName: i18n.t('Modes:Total Metabolic Tumor Volume'),
_unsubscriptions: [],
// Toolbar buttons/layout and tool group additions are referenced by
// customization name; the tmtv extension registers the defaults and
// `?customization=` modules can extend them.
toolbarButtons: 'tmtv.toolbarButtons',
toolbarSections: 'tmtv.toolbarSections',
toolGroupAdditions: 'tmtv.toolGroupAdditions',
// Tool group setup used by onModeEnter; extending modes can replace it.
initToolGroups,
/**
* Lifecycle hooks
*/
onModeEnter,
onModeExit,
validationTags: {
study: [],
series: [],
},
isValidMode,
routes: [tmtvRoute],
extensions: extensionDependencies,
hangingProtocol: tmtv.hangingProtocol,
sopClassHandlers: [ohif.sopClassHandler],
};
/**
* The mode uses the basic mode's `modeFactory`, which applies
* immutability-helper commands from `modeConfiguration` onto `modeInstance`,
* so a site can define a mode that extends this one.
*/
const mode = {
id,
modeFactory,
modeInstance,
extensionDependencies,
};
export default mode;
export { initToolGroups };

10
modes/tmtv/src/initToolGroups.js
View File

@ -1,8 +1,12 @@
import { toolGroupIds } from '@ohif/extension-tmtv';
import { MIN_SEGMENTATION_DRAWING_RADIUS, MAX_SEGMENTATION_DRAWING_RADIUS } from './constants';
export { toolGroupIds };
export const toolGroupIds = {
CT: 'ctToolGroup',
PT: 'ptToolGroup',
Fusion: 'fusionToolGroup',
MIP: 'mipToolGroup',
default: 'default',
};
function _initToolGroups(toolNames, Enums, toolGroupService, commandsManager) {
const tools = {

82
extensions/tmtv/src/customizations/toolbarCustomization.ts → modes/tmtv/src/toolbarButtons.ts
View File

@ -1,12 +1,7 @@
import { ToolbarService } from '@ohif/core';
import { toolGroupIds } from './initToolGroups';
import i18n from 'i18next';
import { toolGroupIds } from '../toolGroupIds';
const { TOOLBAR_SECTIONS } = ToolbarService;
export const MIN_SEGMENTATION_DRAWING_RADIUS = 0.5;
export const MAX_SEGMENTATION_DRAWING_RADIUS = 99.5;
import { MIN_SEGMENTATION_DRAWING_RADIUS, MAX_SEGMENTATION_DRAWING_RADIUS } from './constants';
const setToolActiveToolbar = {
commandName: 'setToolActiveToolbar',
@ -15,11 +10,6 @@ const setToolActiveToolbar = {
},
};
/**
* Default toolbar buttons for the TMTV mode, registered as the
* `tmtv.toolbarButtons` customization so `?customization=` modules can extend
* or replace them.
*/
const toolbarButtons = [
{
id: 'MeasurementTools',
@ -311,11 +301,7 @@ const toolbarButtons = [
evaluate: [
{
name: 'evaluate.cornerstone.segmentation',
toolNames: [
'ThresholdCircularBrush',
'ThresholdSphereBrush',
'ThresholdCircularBrushDynamic',
],
toolNames: ['ThresholdCircularBrush', 'ThresholdSphereBrush', 'ThresholdCircularBrushDynamic'],
},
{
name: 'evaluate.cornerstone.segmentation.synchronizeDrawingRadius',
@ -472,64 +458,4 @@ const toolbarButtons = [
},
];
/**
* Default toolbar layout for the TMTV mode, registered as the
* `tmtv.toolbarSections` customization.
*/
export const toolbarSections: Record<string, string[]> = {
[TOOLBAR_SECTIONS.primary]: ['MeasurementTools', 'Zoom', 'Pan', 'WindowLevel', 'Crosshairs'],
[TOOLBAR_SECTIONS.viewportActionMenu.topLeft]: ['orientationMenu', 'dataOverlayMenu'],
[TOOLBAR_SECTIONS.viewportActionMenu.bottomMiddle]: ['AdvancedRenderingControls'],
AdvancedRenderingControls: [
'windowLevelMenuEmbedded',
'voiManualControlMenu',
'Colorbar',
'opacityMenu',
'thresholdMenu',
],
[TOOLBAR_SECTIONS.viewportActionMenu.topRight]: [
'modalityLoadBadge',
'trackingStatus',
'navigationComponent',
],
[TOOLBAR_SECTIONS.viewportActionMenu.bottomLeft]: ['windowLevelMenu'],
MeasurementTools: ['Length', 'Bidirectional', 'ArrowAnnotate', 'EllipticalROI'],
ROIThresholdToolbox: ['SegmentationTools'],
SegmentationTools: ['RectangleROIStartEndThreshold', 'BrushTools'],
BrushTools: ['Brush', 'Eraser', 'Threshold'],
};
/**
* Customizations registered (at default scope) by the tmtv extension. The
* TMTV mode reads these by name so `?customization=` modules can extend the
* defaults, and site modes can extend the TMTV mode with different names.
*/
const toolbarCustomization = {
'tmtv.toolbarButtons': toolbarButtons,
'tmtv.toolbarSections': toolbarSections,
// Extra tools layered onto the mode's tool groups after creation; entries
// reference tool blocks such as `cornerstone.annotationToolGroupTools`.
'tmtv.toolGroupAdditions': {
[toolGroupIds.CT]: [],
[toolGroupIds.PT]: [],
[toolGroupIds.Fusion]: [],
[toolGroupIds.MIP]: [],
[toolGroupIds.default]: [],
},
// Panel lists resolved by the TMTV mode's layout template.
'tmtv.leftPanels': ['@ohif/extension-default.panelModule.seriesList'],
'tmtv.rightPanels': [
'@ohif/extension-tmtv.panelModule.tmtv',
'@ohif/extension-tmtv.panelModule.petSUV',
],
};
export { toolbarButtons };
export default toolbarCustomization;
export default toolbarButtons;

13
platform/app/public/config/dev.js
View File

@ -3,20 +3,17 @@
// Local development configuration.
//
// This is the default config for the dev server (`pnpm run dev`, `dev:fast`,
// `start`). It is intentionally kept at parity with config/netlify.js (the
// public demo deploy): every data source is enabled, the `?customization=` URL
// feature is ON via `customizationUrlPrefixes`, and the same startup
// `customizationService` modules are loaded — so the whole app, including
// customizations, can be exercised locally exactly as it runs on the demo.
// The locked-down config/default.js is what a plain production build emits
// instead.
// `start`). Like config/netlify.js it is full-featured — every data source is
// enabled and the `?customization=` URL feature is ON via
// `customizationUrlPrefixes` — so the whole app can be exercised locally. The
// locked-down config/default.js is what a plain production build emits instead.
window.config = {
name: 'config/dev.js',
routerBasename: null,
// whiteLabeling: {},
extensions: [],
modes: [],
customizationService: ['@ohif/extension-default.customizationModule.theme'],
customizationService: {},
// URL-driven customizations (?customization=). The `default` prefix (no
// slashes) is used for values without a leading slash; every other prefix

40
platform/app/public/customizations/segmentationAnnotationTools.jsonc
View File

@ -1,40 +0,0 @@
// URL-loaded customization: segmentationAnnotationTools
//
// Enables the measurement/annotation tools inside the segmentation mode by
// composing capability blocks the cornerstone extension already exports:
//
// - the annotation buttons are already registered by the mode (its button
// list includes `cornerstone.toolbarButtons`), so the toolbar only needs a
// `MeasurementTools` section added to the primary bar,
// - the annotation tools themselves are added to the mode's tool groups via
// `cornerstone.annotationToolGroupTools`,
// - and the measurement panel is appended so annotations can be reviewed.
//
// Load it with `?customization=segmentationAnnotationTools`.
{
"global": {
"cornerstone.segmentationModeToolbarSections": {
"primary": { "$unshift": ["MeasurementTools"] },
"MeasurementTools": {
"$set": [
"Length",
"Bidirectional",
"ArrowAnnotate",
"EllipticalROI",
"RectangleROI",
"CircleROI",
"PlanarFreehandROI",
"SplineROI",
"LivewireContour"
]
}
},
"segmentation.toolGroupAdditions": {
"default": { "$push": ["cornerstone.annotationToolGroupTools"] },
"mpr": { "$push": ["cornerstone.annotationToolGroupTools"] }
},
"segmentation.rightPanels": {
"$push": ["@ohif/extension-cornerstone.panelModule.panelMeasurement"]
}
}
}

49
platform/app/public/customizations/segmentationEditing.jsonc
View File

@ -1,49 +0,0 @@
// URL-loaded customization: segmentationEditing
//
// Adds segmentation editing to the basic and longitudinal (viewer) modes by
// composing the capability blocks the cornerstone extension already exports:
//
// - the segmentation editing toolbar buttons and toolbox section wiring
// (`cornerstone.segmentationToolbarButtons` / `cornerstone.segmentationToolbarSections`),
// - the segmentation editing tools for the modes' tool groups
// (`cornerstone.segmentationToolGroupTools`),
// - the segmentation panels that render the editing toolbox
// (`panelSegmentationWithToolsLabelMap` / `panelSegmentationWithToolsContour`),
// - and enables editing in the segmentation panel.
//
// Both modes read the `basic.*` toolbar/tool-group customizations (longitudinal
// extends the basic mode instance), so a single set of commands covers both;
// only the right-panel lists are mode specific.
//
// Load it with `?customization=segmentationEditing`.
{
"global": {
"basic.toolbarButtons": {
"$push": ["cornerstone.segmentationToolbarButtons"]
},
"basic.toolbarSections": {
"$push": ["cornerstone.segmentationToolbarSections"]
},
"basic.toolGroupAdditions": {
"default": { "$push": ["cornerstone.segmentationToolGroupTools"] },
"mpr": { "$push": ["cornerstone.segmentationToolGroupTools"] }
},
"basic.rightPanels": {
"$set": [
"@ohif/extension-cornerstone.panelModule.panelSegmentationWithToolsLabelMap",
"@ohif/extension-cornerstone.panelModule.panelSegmentationWithToolsContour",
"@ohif/extension-cornerstone.panelModule.panelMeasurement"
]
},
"longitudinal.rightPanels": {
"$set": [
"@ohif/extension-cornerstone.panelModule.panelSegmentationWithToolsLabelMap",
"@ohif/extension-cornerstone.panelModule.panelSegmentationWithToolsContour",
"@ohif/extension-measurement-tracking.panelModule.trackedMeasurements"
]
},
// The basic/longitudinal modes disable segmentation panel editing only
// when no customization has expressed a preference, so this enables it.
"panelSegmentation.disableEditing": { "$set": false }
}
}

20
platform/docs/docs/migration-guide/3p12-to-3p13/customization-url.md
View File

@ -179,23 +179,13 @@ or the full demo source list, you have two options:
## New `config/dev.js`; dev server no longer uses `default.js`
`config/default.js` is now **only** the default for a full production build. The
dev server gets a full-featured config instead, so `?customization=` and the
complete data-source list are available while developing without editing
`default.js`.
- **`config/dev.js`** (new) is the full-featured local-development config: every
data source enabled and `?customization=` turned on. The dev-server scripts
(`pnpm run dev`, `dev:fast`, `start`) now default to `config/dev.js`. It is
kept at **parity with `config/netlify.js`** — including the startup
`customizationService` modules (e.g. the appearance/theme customization) — so
customizations behave locally exactly as they do on the public demo.
- **`config/netlify.js`** is the public demo / Netlify deploy config
(`build:viewer:ci`): the full data source set plus
`customizationUrlPrefixes: { default: './customizations/' }` and the same
`customizationService` modules.
- **`config/default.js`** is the locked-down baseline and is the default **only**
for a real production build (`pnpm run build` with no `APP_CONFIG`).
(`pnpm run dev`, `dev:fast`, `start`) now default to `config/dev.js`.
- **`config/netlify.js`** is the public demo / Netlify deploy config: the full
data source set plus `customizationUrlPrefixes: { default: './customizations/' }`.
- **`config/default.js`** remains the fallback for a real production build
(`pnpm run build` with no `APP_CONFIG`).
### `APP_CONFIG` is honored, not clobbered

40
platform/docs/docs/platform/services/customization-service/specificCustomizations.md
View File

@ -207,46 +207,6 @@ tool (drag to rotate the image freely, unlike the fixed 90° *Rotate Right*):
> module applies at the *global* scope, the `$push` **extends** the built-in buttons rather than
> replacing them. The same pattern works for any tool already in the active tool group.
#### 4. Compose whole capability blocks into a mode
Each shipped mode reads its toolbar, tool-group additions and panel lists through per-mode
customization keys, and the values are **lists that may reference other customizations by name**.
Extensions register both the per-mode defaults and reusable "capability blocks", so a JSON module can
extend a mode by pushing a block's *name* instead of restating its contents.
Per-mode keys (registered by the cornerstone / measurement-tracking / tmtv extensions):
| Mode | Buttons | Sections | Tool group additions | Panels |
| --- | --- | --- | --- | --- |
| basic & longitudinal | `basic.toolbarButtons` | `basic.toolbarSections` | `basic.toolGroupAdditions` | `basic.leftPanels` / `basic.rightPanels` (longitudinal: `longitudinal.*`) |
| segmentation | `segmentation.toolbarButtons` | `segmentation.toolbarSections` | `segmentation.toolGroupAdditions` | `segmentation.leftPanels` / `segmentation.rightPanels` |
| tmtv | `tmtv.toolbarButtons` | `tmtv.toolbarSections` | `tmtv.toolGroupAdditions` | `tmtv.leftPanels` / `tmtv.rightPanels` |
Capability blocks exported by the cornerstone extension:
- `cornerstone.toolbarButtons` / `cornerstone.toolbarSections` — the general viewer toolbar.
- `cornerstone.segmentationToolbarButtons` / `cornerstone.segmentationToolbarSections` — the
segmentation editing buttons and the toolbox section wiring rendered by the
`panelSegmentationWithTools*` panels.
- `cornerstone.segmentationModeToolbarSections` — the segmentation mode's main toolbar layout.
- `cornerstone.segmentationToolGroupTools` — the segmentation editing tools (brushes, scissors,
contour tools) as a `{ passive: [...] }` block for `toolGroupAdditions`.
- `cornerstone.annotationToolGroupTools` — the measurement/annotation tools as a
`{ passive: [...] }` block for `toolGroupAdditions`.
Two shipped modules demonstrate the pattern:
- [`segmentationEditing.jsonc`](https://github.com/OHIF/Viewers/blob/master/platform/app/public/customizations/segmentationEditing.jsonc)
(`?customization=segmentationEditing`) adds segmentation editing to the basic and longitudinal
modes: it pushes the segmentation button/section/tool blocks onto the `basic.*` keys, swaps the
right panels to the segmentation panels with tools, and enables editing via
`panelSegmentation.disableEditing`.
- [`segmentationAnnotationTools.jsonc`](https://github.com/OHIF/Viewers/blob/master/platform/app/public/customizations/segmentationAnnotationTools.jsonc)
(`?customization=segmentationAnnotationTools`) enables the annotation tools inside the
segmentation mode: it adds a `MeasurementTools` section to the primary bar, pushes
`cornerstone.annotationToolGroupTools` onto `segmentation.toolGroupAdditions`, and appends the
measurement panel.
Each payload value uses [immutability-helper](https://github.com/kolodny/immutability-helper)
commands (`$set`, `$push`, `$merge`, ...) exactly like `window.config` customizations, so a module can
also append to a list or merge into an existing object rather than replacing it wholesale.