NonTarget Tool refactoring
NonTarget Tool is using callback function to set lesion number, Unused function-nonTargetToolAdded is removed from lesionTable.js
This commit is contained in:
Evren Ozkan
parent
a205727c27
commit
37c3eb4c71
@ -4,38 +4,42 @@
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var toolType = 'nonTarget';
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// Define a callback to get your text annotation
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// This could be used, e.g. to open a modal
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function getTextCallback(doneChangingTextCallback) {
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doneChangingTextCallback(prompt('Enter your annotation:'));
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}
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function changeTextCallback(data, doneChangingTextCallback) {
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doneChangingTextCallback(prompt('Change your annotation:'));
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}
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var configuration = {
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getTextCallback: getTextCallback,
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changeTextCallback: changeTextCallback,
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setLesionNumberCallback: setLesionNumberCallback,
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getNonTargetLesionLocationCallback: getNonTargetLesionLocationCallback,
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changeNonTargetLesionLocationCallback: changeNonTargetLesionLocationCallback,
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drawHandles: false,
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drawHandlesOnHover: true,
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arrowFirst: true
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};
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// Set lesion number
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// Get Non-Target lesions on image
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function setLesionNumberCallback(measurementData, eventData, doneCallback) {
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var lesionNumber = 1;
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doneCallback(lesionNumber);
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}
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// Define a callback to get your text annotation
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// This could be used, e.g. to open a modal
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function getNonTargetLesionLocationCallback(measurementData, eventData, doneCallback) {
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doneCallback(prompt('Enter your lesion location:'));
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}
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function changeNonTargetLesionLocationCallback(measurementData, eventData, doneCallback) {
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doneCallback(prompt('Change your lesion location:'));
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}
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/// --- Mouse Tool --- ///
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///////// BEGIN ACTIVE TOOL ///////
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function addNewMeasurement(mouseEventData) {
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function doneChangingTextCallback(text) {
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if (text !== null) {
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measurementData.text = text;
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} else {
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cornerstoneTools.removeToolState(mouseEventData.element, toolType, measurementData);
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}
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var element = mouseEventData.element;
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measurementData.active = false;
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cornerstone.updateImage(mouseEventData.element);
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function doneCallback(lesionNumber) {
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measurementData.lesionName = "Non-Target "+lesionNumber;
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measurementData.lesionNumber = lesionNumber;
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measurementData.active = true;
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cornerstone.updateImage(element);
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}
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var measurementData = createNewMeasurement(mouseEventData);
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@ -53,21 +57,24 @@
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$(mouseEventData.element).off('CornerstoneToolsMouseDown', cornerstoneTools.nonTarget.mouseDownCallback);
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$(mouseEventData.element).off('CornerstoneToolsMouseDownActivate', cornerstoneTools.nonTarget.mouseDownActivateCallback);
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cornerstone.updateImage(mouseEventData.element);
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var config = cornerstoneTools.nonTarget.getConfiguration();
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// Set lesion number and lesion name
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if (measurementData.lesionName === undefined) {
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config.setLesionNumberCallback(measurementData, mouseEventData, doneCallback);
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}
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cornerstone.updateImage(element);
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cornerstoneTools.moveNewHandle(mouseEventData, measurementData.handles.end, function() {
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if (cornerstoneTools.anyHandlesOutsideImage(mouseEventData, measurementData.handles)) {
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// delete the measurement
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cornerstoneTools.removeToolState(mouseEventData.element, toolType, measurementData);
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}
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var config = cornerstoneTools.nonTarget.getConfiguration();
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if (measurementData.text === undefined) {
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config.getTextCallback(doneChangingTextCallback);
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}
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config.getNonTargetLesionLocationCallback(measurementData, mouseEventData, doneCallback);
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$(mouseEventData.element).on('CornerstoneToolsMouseMove', eventData, cornerstoneTools.nonTarget.mouseMoveCallback);
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// CornerstoneToolsMouseDown Event
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$(mouseEventData.element).on('CornerstoneToolsMouseDown', eventData, cornerstoneTools.nonTarget.mouseDownCallback);
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$(mouseEventData.element).on('CornerstoneToolsMouseDownActivate', eventData, cornerstoneTools.nonTarget.mouseDownActivateCallback);
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@ -77,17 +84,6 @@
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function createNewMeasurement(mouseEventData) {
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// create the measurement data for this tool with the end handle activated
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// TODO: Get text from measurements collection
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// Subscribe CornerstoneMouseup event, when mouse is up, call lesionDialog
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$(mouseEventData.element).on("CornerstoneToolsMouseUp", function (e) {
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// Unsubscribe CornerstoneToolsMouseUp event
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$(mouseEventData.element).off("CornerstoneToolsMouseUp");
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$(mouseEventData.element).trigger("NonTargetToolAdded", [e, measurementData]);
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});
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var timepointID = $(mouseEventData.element).data('timepointID');
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var lesionNumber = measurementManagerDAL.getNewLesionNumber(timepointID, false);
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var measurementData = {
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visible: true,
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active: true,
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@ -114,9 +110,9 @@
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}
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},
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imageId: mouseEventData.image.imageId,
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lesionNumber: lesionNumber,
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text: "Non-Target " + lesionNumber,
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isTarget: false
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measurementText: '',
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isTarget: false,
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uid: uuid.v4()
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};
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return measurementData;
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@ -271,9 +267,9 @@
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// Draw the text
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if (lesion.text && lesion.text !== '') {
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if (lesion.lesionName && lesion.lesionName !== '') {
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context.font = font;
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var boundingBox = cornerstoneTools.drawTextBox(context, lesion.text, canvasTextLocation.x, canvasTextLocation.y, color);
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var boundingBox = cornerstoneTools.drawTextBox(context, lesion.lesionName, canvasTextLocation.x, canvasTextLocation.y, color);
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lesion.handles.textBox.boundingBox = boundingBox;
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}
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@ -1,47 +1,6 @@
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Measurements = new Meteor.Collection(null);
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Timepoints = new Meteor.Collection(null);
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// When nonTarget lesion is added to image, insert data to lesion table
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function nonTargetToolAdded(e, eventData, lesionData) {
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// Set timepointID
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lesionData.timepointID = $(e.currentTarget).data('timepointID');
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var locationUID = measurementManagerDAL.isLesionNumberAdded(lesionData);
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if (locationUID) {
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// location is selected and disable select location in dialog
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lesionData.locationUID = locationUID;
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var locationName = measurementManagerDAL.getLocationName(locationUID);
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$("#selectNonTargetLesionLocation option").each(function()
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{
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if ($(this).text() === locationName) {
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// Select location in locations dropdown list
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$("#selectNonTargetLesionLocation option").eq($(this).index()).attr("selected", "selected");
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return;
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}
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});
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$("#selectNonTargetLesionLocation").attr("disabled", "disabled");
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} else{
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// If selectNonTargetLesionLocation is disabled, make it enable
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$("#selectNonTargetLesionLocation").removeAttr("disabled");
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}
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// Save lesionData in Session to use after location and response are selected
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Session.set("nonTargetLesionData", lesionData);
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var dialogPointsOnPage = eventData.currentPoints.page;
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$("#modal-dialog-container-nonTargetLesion").css({
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"top": dialogPointsOnPage.y,
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"left": dialogPointsOnPage.x
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});
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$("#nonTargetLesionLocationDialog").modal("show");
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}
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// Activate selected lesions when lesion table row is clicked
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function updateLesions(e) {
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// lesionNumber of measurement = id of row
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@ -116,9 +75,6 @@ Template.lesionTable.onRendered(function() {
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});
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$(element).data('timepointID', timepointID);
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// Listen NonTargetToolAdded Event
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$(element).on("NonTargetToolAdded", nonTargetToolAdded);
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});
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});
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@ -1,20 +1,16 @@
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#nonTargetLesionLocationDialog {
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background: transparent;
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}
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#modal-dialog-container-nonTargetLesion {
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display: none;
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position: absolute;
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border: none;
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}
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z-index: 100;
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background: white;
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padding: 10px 20px 10px 20px;
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border-radius: 10px;
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#btnCloseNonTargetLesionPopup {
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outline: 0;
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border: none;
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background-color: transparent;
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}
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#selectNonTargetLesionLocation, #selectNonTargetLesionLocationResponse {
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width: 80%;
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width: 100%;
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}
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.dialogContent, .lesionLocation, .locationResponse {
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@ -1,40 +1,43 @@
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<template name="nonTargetLesionDialog">
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<div class="modal fade" id="nonTargetLesionLocationDialog">
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<div id="modal-dialog-container-nonTargetLesion" class="modal-dialog modal-sm">
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<div class="modal-content" style="padding: 10px;">
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<div class="dialogHeader">
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<div style="float:left;"><h4>Select Lesion Location</h4></div>
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<div style="float:right;"><button class="btn" id="btnCloseNonTargetLesionPopup"><i class="fa fa-close"></i></button></div>
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<div id="nonTargetLesionLocationDialog">
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<div class="dialogHeader">
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<div class="dialogHeader">
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<div><h4>Select Lesion Location</h4></div>
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</div>
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</div>
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<div class="dialogContent">
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<div class="lesionLocation">
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<div class="elementContainer">
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<label>Lesion Location</label>
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</div>
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<div class="dialogContent">
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<div class="lesionLocation">
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<div class="elementContainer">
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<label>Lesion Location</label>
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</div>
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<div class="elementContainer">
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<select id="selectNonTargetLesionLocation">
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<option value="-1"></option>
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</select>
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</div>
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</div>
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<div class="locationResponse">
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<div class="elementContainer">
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<label>Response</label>
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</div>
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<div class="elementContainer">
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<select id="selectNonTargetLesionLocationResponse">
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<option value="-1"></option>
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</select>
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</div>
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</div>
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<div class="locationOK">
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<button class="btn" id="nonTargetLesionOK">OK</button>
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</div>
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<div class="elementContainer">
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<select id="selectNonTargetLesionLocation">
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<option value="-1"></option>
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{{ #each lesionLocations}}
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<option value='{{_id}}'>{{location}}</option>
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{{ /each}}
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</select>
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</div>
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</div>
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<div class="locationResponse">
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<div class="elementContainer">
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<label>Response</label>
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</div>
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<div class="elementContainer">
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<select id="selectNonTargetLesionLocationResponse">
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<option value="-1"></option>
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{{ #each locationResponses}}
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<option value='{{code}}'>{{text}}</option>
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{{ /each}}
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</select>
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</div>
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</div>
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<div class="locationOK">
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<button class="btn" id="nonTargetLesionOK">OK</button>
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</div>
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</div>
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</div>
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</template>
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@ -1,135 +1,231 @@
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//fill selectLesionLocation element
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var lesionLocationsArray = [{
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location: "Brain Brainstem",
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hasDescription: false,
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description: ""
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}, {
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location: "Brain Cerebellum Left",
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hasDescription: false,
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description: ""
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}, {
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location: "Brain Cerebrum Left",
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hasDescription: false,
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description: ""
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}, {
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location: "Brain Cerebrum Right",
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hasDescription: false,
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description: ""
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}, {
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location: "Brain Multiple Sites",
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hasDescription: false,
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description: ""
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}];
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// This event sets lesion number for new lesion
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var lesionLocationsResponseArray = [
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function setLesionNumberCallback(measurementData, eventData, doneCallback) {
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measurementData.timepointID = $(eventData.element).data('timepointID');
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// Get a lesion number for this lesion, depending on whether or not the same lesion previously
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// exists at a different timepoint
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var lesionNumber = measurementManagerDAL.getNewLesionNumber(measurementData.timepointID, isTarget=false);
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measurementData.lesionNumber = lesionNumber;
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// Set lesion number
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doneCallback(lesionNumber);
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}
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// This event determines whether or not to show the Non-Target lesion dialog
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// If there already exists a lesion with this specific lesion number,
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// related to the chosen location.
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function getNonTargetLesionLocationCallback(measurementData, eventData, doneCallback) {
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// Get the non-target lesion location dialog
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var nonTargetlesionDialog = $("#nonTargetLesionLocationDialog");
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// Find the select option box
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var selectorLocation = nonTargetlesionDialog.find("select#selectNonTargetLesionLocation");
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var selectorResponse = nonTargetlesionDialog.find("select#selectNonTargetLesionLocationResponse");
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// OK button
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var btnOK = nonTargetlesionDialog.find("button#nonTargetLesionOK");
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// If selector location is disabled, make it enable
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enableLocationSelection();
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// Find out if this lesion number is already added in the lesion manager for another timepoint
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// If it is, disable selector location
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var locationUID = measurementManagerDAL.lesionNumberExists(measurementData);
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if (locationUID) {
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measurementData.locationUID = locationUID;
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// Disable the selection of a new location
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disableLocationSelection(measurementData.locationUID);
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}
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// Disable selector location to prevent selecting a new location
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function disableLocationSelection(locationUID) {
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var locationName = measurementManagerDAL.getLocationName(locationUID);
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selectorLocation.find('option').each(function()
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{
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if ($(this).text().trim() === locationName.trim()) {
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// Select location in locations dropdown list
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selectorLocation.find('option').eq($(this).index()).attr("selected", "selected");
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return;
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}
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});
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selectorLocation.attr("disabled", "disabled");
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}
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// Enable selector location
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function enableLocationSelection() {
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selectorLocation.removeAttr("disabled");
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}
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function closeHandler() {
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// Hide the lesion dialog
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nonTargetlesionDialog.css('display', 'none');
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// Enable selector location
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enableLocationSelection();
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// Get the current value of the select option box
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selectorLocation.find("option:first").prop("selected", "selected");
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selectorResponse.find("option:first").prop("selected", "selected");
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}
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// Attach keypress handlers so the user can close with the Enter button
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nonTargetlesionDialog.off("keypress");
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nonTargetlesionDialog.on('keypress', keyPressHandler);
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// This is the keypress callback function
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function keyPressHandler(e) {
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// If Enter is pressed, close the dialog
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if (e.which === 13) {
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closeHandler();
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}
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}
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// Show the lesion location dialog above
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nonTargetlesionDialog.css({
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top: eventData.currentPoints.page.y,
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left: eventData.currentPoints.page.x,
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display: 'block'
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});
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// Click OK button
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// Add lesion to lesion table
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btnOK.off('click');
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btnOK.on('click', function(e) {
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// Get the current value of the selector
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var selectedOptionId = selectorLocation.find("option:selected").val();
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var responseOptionCode = nonTargetlesionDialog.find("select#selectNonTargetLesionLocationResponse option:selected").val();
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// If the selected option is still the default (-1)
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// then stop here
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if (selectedOptionId < 0) {
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return;
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}
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// If the selected response option is still the default (-1)
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// then stop here
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if (responseOptionCode < 0) {
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return;
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}
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// Get selected location data
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var locationObj = LesionLocations.findOne({_id: selectedOptionId});
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var id;
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var existingLocation = PatientLocations.findOne({location: locationObj.location});
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if (existingLocation) {
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id = existingLocation._id;
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} else {
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// Adds location data to PatientLocation and retrieve the location ID
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id = PatientLocations.insert({location: locationObj.location});
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}
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// Link locationUID with active lesion measurementData
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measurementData.locationUID = id;
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/// Set the isTarget value to true, since this is the target-lesion dialog callback
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measurementData.isTarget = false;
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// measurementText is set from location response list
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measurementData.measurementText = responseOptionCode;
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// Adds lesion data to timepoints array
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measurementManagerDAL.addLesionData(measurementData);
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// Close the dialog
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closeHandler();
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});
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}
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function changeNonTargetLesionLocationCallback(measurementData, eventData, doneCallback) {
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doneCallback(prompt('Change your lesion location:'));
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}
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var config = {
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setLesionNumberCallback: setLesionNumberCallback,
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getNonTargetLesionLocationCallback: getNonTargetLesionLocationCallback,
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changeNonTargetLesionLocationCallback: changeNonTargetLesionLocationCallback
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};
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cornerstoneTools.nonTarget.setConfiguration(config);
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LocationResponses = new Meteor.Collection(null);
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LocationResponses.insert(
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{
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text: "Complete response",
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code: "CR",
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description: ""
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},
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}
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);
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LocationResponses.insert(
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{
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text: "Progressive disease",
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code: "PD",
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description: ""
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},
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}
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);
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LocationResponses.insert(
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{
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text: "Complete response",
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code: "CR",
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description: ""
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}
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);
|
||||
LocationResponses.insert(
|
||||
{
|
||||
text: "Stable disease",
|
||||
code: "SD",
|
||||
description: ""
|
||||
},
|
||||
}
|
||||
);
|
||||
LocationResponses.insert(
|
||||
{
|
||||
text: "Non-measurable",
|
||||
code: "NM",
|
||||
description: ""
|
||||
},
|
||||
}
|
||||
);
|
||||
LocationResponses.insert(
|
||||
{
|
||||
text: "Unknown",
|
||||
code: "UN",
|
||||
description: ""
|
||||
},
|
||||
}
|
||||
);
|
||||
LocationResponses.insert(
|
||||
{
|
||||
text: "Not Evaluable",
|
||||
code: "NE",
|
||||
description: ""
|
||||
},
|
||||
}
|
||||
);
|
||||
LocationResponses.insert(
|
||||
{
|
||||
text: "Non-CR/Non-PD",
|
||||
code: "NN",
|
||||
description: ""
|
||||
},
|
||||
}
|
||||
);
|
||||
LocationResponses.insert(
|
||||
{
|
||||
text: "Excluded",
|
||||
code: "EX",
|
||||
description: ""
|
||||
}
|
||||
];
|
||||
);
|
||||
|
||||
Template.nonTargetLesionDialog.onRendered(function() {
|
||||
|
||||
function fillSelectLesionLocation() {
|
||||
var el = $("#selectNonTargetLesionLocation");
|
||||
el.find('option:not(:first)').remove();
|
||||
$.each(lesionLocationsArray, function(key, value) {
|
||||
el.append("<option value='" + key + "'>" + value.location + "</option>");
|
||||
});
|
||||
}
|
||||
|
||||
function fillResponses() {
|
||||
var el = $("#selectNonTargetLesionLocationResponse");
|
||||
el.find('option:not(:first)').remove();
|
||||
$.each(lesionLocationsResponseArray, function(key, value) {
|
||||
el.append("<option value='" + value.code + "'>" + value.code +" - "+value.text + "</option>");
|
||||
});
|
||||
}
|
||||
|
||||
// Fill dropdown
|
||||
fillSelectLesionLocation();
|
||||
|
||||
// Fill location responses
|
||||
fillResponses();
|
||||
|
||||
});
|
||||
|
||||
Template.nonTargetLesionDialog.events({
|
||||
'click button#btnCloseNonTargetLesionPopup': function(e) {
|
||||
$("#nonTargetLesionLocationDialog").modal("hide");
|
||||
Template.nonTargetLesionDialog.helpers({
|
||||
'lesionLocations': function() {
|
||||
return LesionLocations.find();
|
||||
},
|
||||
|
||||
'click button#nonTargetLesionOK': function() {
|
||||
|
||||
var lesionData = Session.get("nonTargetLesionData");
|
||||
// Get selected location data
|
||||
var selectedLocationIndex = $("#selectNonTargetLesionLocation").val();
|
||||
if (selectedLocationIndex < 0) {
|
||||
return;
|
||||
}
|
||||
// Get selected location data
|
||||
var locationObj = lesionLocationsArray[selectedLocationIndex];
|
||||
lesionData.location = $("#selectNonTargetLesionLocation :selected").text();
|
||||
|
||||
var response = $("#selectNonTargetLesionLocationResponse").val();
|
||||
if(response === "-1") {
|
||||
return;
|
||||
}
|
||||
$("#nonTargetLesionLocationDialog").modal("hide");
|
||||
lesionData.measurementText = response;
|
||||
|
||||
// Select first option
|
||||
$("#selectNonTargetLesionLocation").val($("#selectNonTargetLesionLocation option:first").val());
|
||||
$("#selectNonTargetLesionLocationResponse").val($("#selectNonTargetLesionLocationResponse option:first").val());
|
||||
|
||||
if (typeof lesionData.locationUID !== 'undefined') {
|
||||
measurementManagerDAL.updateTimepointData(lesionData);
|
||||
return;
|
||||
}
|
||||
|
||||
// Adds location data to trialPatientLocations array and returns locationUID
|
||||
var locationUID = measurementManagerDAL.addNewLocation(locationObj);
|
||||
// Link locationUID with activeLesionMeasurementData
|
||||
lesionData.locationUID = locationUID;
|
||||
measurementManagerDAL.addLesionData(lesionData);
|
||||
|
||||
|
||||
|
||||
'locationResponses': function() {
|
||||
return LocationResponses.find();
|
||||
}
|
||||
});
|
||||
Loading…
Reference in New Issue
Block a user