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feat(segmentation): Enhance Segmentation Tools with Preview and Selection Features (#4870)

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Alireza 2025-03-19 18:24:33 -04:00 committed by GitHub
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24 changed files with 392 additions and 236 deletions
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@ -33,7 +33,7 @@
}, },
"addOns/externals/devDependencies": { "addOns/externals/devDependencies": {
"name": "@externals/devDependencies", "name": "@externals/devDependencies",
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"@kitware/vtk.js": "32.12.0", "@kitware/vtk.js": "32.12.0",
@ -121,21 +121,21 @@
}, },
"addOns/externals/dicom-microscopy-viewer": { "addOns/externals/dicom-microscopy-viewer": {
"name": "@externals/dicom-microscopy-viewer", "name": "@externals/dicom-microscopy-viewer",
"version": "3.10.0-beta.128", "version": "3.10.0-beta.130",
"dependencies": { "dependencies": {
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}, },
}, },
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@ -152,9 +152,9 @@
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@ -166,19 +166,19 @@
}, },
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@ -189,16 +189,16 @@
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@ -209,19 +209,19 @@
}, },
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}, },
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@ -232,19 +232,19 @@
}, },
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@ -254,19 +254,19 @@
}, },
"extensions/cornerstone-dynamic-volume": { "extensions/cornerstone-dynamic-volume": {
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@ -276,7 +276,7 @@
}, },
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@ -284,8 +284,8 @@
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}, },
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@ -299,7 +299,7 @@
}, },
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@ -310,10 +310,10 @@
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@ -324,14 +324,14 @@
}, },
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@ -341,14 +341,14 @@
}, },
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@ -358,20 +358,20 @@
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@ -384,14 +384,14 @@
}, },
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@ -401,14 +401,14 @@
}, },
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@ -418,7 +418,7 @@
}, },
"modes/basic-dev-mode": { "modes/basic-dev-mode": {
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@ -428,17 +428,17 @@
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}, },
}, },
"modes/basic-test-mode": { "modes/basic-test-mode": {
"name": "@ohif/mode-test", "name": "@ohif/mode-test",
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@ -448,19 +448,19 @@
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}, },
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}, },
}, },
"modes/longitudinal": { "modes/longitudinal": {
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@ -470,32 +470,32 @@
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4
extensions/cornerstone-dicom-pmap/package.json
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4
extensions/cornerstone-dicom-seg/package.json
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6
extensions/cornerstone-dicom-sr/package.json
View File

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4
extensions/cornerstone-dynamic-volume/package.json
View File

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"@cornerstonejs/core": "^3.7.1", "@cornerstonejs/core": "^3.7.5",
"@cornerstonejs/tools": "^3.7.1", "@cornerstonejs/tools": "^3.7.5",
"classnames": "^2.3.2" "classnames": "^2.3.2"
} }
} }

12
extensions/cornerstone/package.json
View File

@ -38,7 +38,7 @@
"@cornerstonejs/codec-libjpeg-turbo-8bit": "^1.2.2", "@cornerstonejs/codec-libjpeg-turbo-8bit": "^1.2.2",
"@cornerstonejs/codec-openjpeg": "^1.2.4", "@cornerstonejs/codec-openjpeg": "^1.2.4",
"@cornerstonejs/codec-openjph": "^2.4.5", "@cornerstonejs/codec-openjph": "^2.4.5",
"@cornerstonejs/dicom-image-loader": "^3.7.1", "@cornerstonejs/dicom-image-loader": "^3.7.5",
"@ohif/core": "3.10.0-beta.130", "@ohif/core": "3.10.0-beta.130",
"@ohif/ui": "3.10.0-beta.130", "@ohif/ui": "3.10.0-beta.130",
"dcmjs": "*", "dcmjs": "*",
@ -51,11 +51,11 @@
}, },
"dependencies": { "dependencies": {
"@babel/runtime": "^7.20.13", "@babel/runtime": "^7.20.13",
"@cornerstonejs/adapters": "^3.7.1", "@cornerstonejs/adapters": "^3.7.5",
"@cornerstonejs/core": "^3.7.1", "@cornerstonejs/core": "^3.7.5",
"@cornerstonejs/labelmap-interpolation": "^3.7.1", "@cornerstonejs/labelmap-interpolation": "^3.7.5",
"@cornerstonejs/polymorphic-segmentation": "^3.7.1", "@cornerstonejs/polymorphic-segmentation": "^3.7.5",
"@cornerstonejs/tools": "^3.7.1", "@cornerstonejs/tools": "^3.7.5",
"@itk-wasm/morphological-contour-interpolation": "1.1.0", "@itk-wasm/morphological-contour-interpolation": "1.1.0",
"@kitware/vtk.js": "32.12.0", "@kitware/vtk.js": "32.12.0",
"html2canvas": "^1.4.1", "html2canvas": "^1.4.1",

57
extensions/cornerstone/src/commandsModule.ts
View File

@ -41,6 +41,23 @@ const toggleSyncFunctions = {
voi: toggleVOISliceSync, voi: toggleVOISliceSync,
}; };
const getLabelmapTools = ({ toolGroupService }) => {
const labelmapTools = [];
const toolGroupIds = toolGroupService.getToolGroupIds();
toolGroupIds.forEach(toolGroupId => {
const toolGroup = cornerstoneTools.ToolGroupManager.getToolGroup(toolGroupId);
const tools = toolGroup.getToolInstances();
// tools is an object with toolName as the key and tool as the value
Object.keys(tools).forEach(toolName => {
const tool = tools[toolName];
if (tool instanceof cornerstoneTools.LabelmapBaseTool) {
labelmapTools.push(tool);
}
});
});
return labelmapTools;
};
function commandsModule({ function commandsModule({
servicesManager, servicesManager,
commandsManager, commandsManager,
@ -57,6 +74,7 @@ function commandsModule({
colorbarService, colorbarService,
hangingProtocolService, hangingProtocolService,
syncGroupService, syncGroupService,
toolbarService,
segmentationService, segmentationService,
displaySetService, displaySetService,
} = servicesManager.services as AppTypes.Services; } = servicesManager.services as AppTypes.Services;
@ -1484,6 +1502,41 @@ function commandsModule({
redo: () => { redo: () => {
DefaultHistoryMemo.redo(); DefaultHistoryMemo.redo();
}, },
toggleSegmentPreviewEdit: ({ toggle }) => {
const labelmapTools = getLabelmapTools({ toolGroupService });
labelmapTools.forEach(tool => {
tool.configuration = {
...tool.configuration,
preview: {
...tool.configuration.preview,
enabled: toggle,
},
};
});
},
toggleSegmentSelect: ({ toggle }) => {
const toolGroupIds = toolGroupService.getToolGroupIds();
toolGroupIds.forEach(toolGroupId => {
const toolGroup = cornerstoneTools.ToolGroupManager.getToolGroup(toolGroupId);
if (toggle) {
toolGroup.setToolActive(cornerstoneTools.SegmentSelectTool.toolName);
} else {
toolGroup.setToolDisabled(cornerstoneTools.SegmentSelectTool.toolName);
}
});
},
acceptPreview: () => {
const labelmapTools = getLabelmapTools({ toolGroupService });
labelmapTools.forEach(tool => {
tool.acceptPreview();
});
},
rejectPreview: () => {
const labelmapTools = getLabelmapTools({ toolGroupService });
labelmapTools.forEach(tool => {
tool.rejectPreview();
});
},
}; };
const definitions = { const definitions = {
@ -1755,6 +1808,10 @@ function commandsModule({
interpolateLabelmap: actions.interpolateLabelmap, interpolateLabelmap: actions.interpolateLabelmap,
runSegmentBidirectional: actions.runSegmentBidirectional, runSegmentBidirectional: actions.runSegmentBidirectional,
downloadCSVSegmentationReport: actions.downloadCSVSegmentationReport, downloadCSVSegmentationReport: actions.downloadCSVSegmentationReport,
toggleSegmentPreviewEdit: actions.toggleSegmentPreviewEdit,
toggleSegmentSelect: actions.toggleSegmentSelect,
acceptPreview: actions.acceptPreview,
rejectPreview: actions.rejectPreview,
}; };
return { return {

37
extensions/cornerstone/src/customizations/segmentationPanelCustomization.tsx
View File

@ -1,5 +1,7 @@
import { CustomDropdownMenuContent } from './CustomDropdownMenuContent'; import { CustomDropdownMenuContent } from './CustomDropdownMenuContent';
import { CustomSegmentStatisticsHeader } from './CustomSegmentStatisticsHeader'; import { CustomSegmentStatisticsHeader } from './CustomSegmentStatisticsHeader';
import React, { useState } from 'react';
import { Switch } from '@ohif/ui-next';
export default function getSegmentationPanelCustomization({ commandsManager, servicesManager }) { export default function getSegmentationPanelCustomization({ commandsManager, servicesManager }) {
return { return {
@ -30,5 +32,40 @@ export default function getSegmentationPanelCustomization({ commandsManager, ser
volume: 'Volume', volume: 'Volume',
lesionGlycolysis: 'Lesion Glycolysis', lesionGlycolysis: 'Lesion Glycolysis',
}, },
'segmentationToolbox.config': () => {
// Get initial states based on current configuration
const [previewEdits, setPreviewEdits] = useState(false);
const [toggleSegmentEnabled, setToggleSegmentEnabled] = useState(false);
const handlePreviewEditsChange = checked => {
setPreviewEdits(checked);
commandsManager.run('toggleSegmentPreviewEdit', { toggle: checked });
};
const handleToggleSegmentEnabledChange = checked => {
setToggleSegmentEnabled(checked);
commandsManager.run('toggleSegmentSelect', { toggle: checked });
};
return (
<div className="bg-muted flex flex-col gap-4 border-b border-b-[2px] border-black px-2 py-3">
<div className="flex items-center gap-2">
<Switch
checked={previewEdits}
onCheckedChange={handlePreviewEditsChange}
/>
<span className="text-base text-white">Preview edits before creating</span>
</div>
<div className="flex items-center gap-2">
<Switch
checked={toggleSegmentEnabled}
onCheckedChange={handleToggleSegmentEnabledChange}
/>
<span className="text-base text-white">Highlight segments to select</span>
</div>
</div>
);
},
}; };
} }

4
extensions/cornerstone/src/initCornerstoneTools.js
View File

@ -37,6 +37,7 @@ import {
LivewireContourTool, LivewireContourTool,
OrientationMarkerTool, OrientationMarkerTool,
WindowLevelRegionTool, WindowLevelRegionTool,
SegmentSelectTool,
} from '@cornerstonejs/tools'; } from '@cornerstonejs/tools';
import * as polySeg from '@cornerstonejs/polymorphic-segmentation'; import * as polySeg from '@cornerstonejs/polymorphic-segmentation';
@ -96,7 +97,7 @@ export default function initCornerstoneTools(configuration = {}) {
addTool(OrientationMarkerTool); addTool(OrientationMarkerTool);
addTool(WindowLevelRegionTool); addTool(WindowLevelRegionTool);
addTool(PlanarFreehandContourSegmentationTool); addTool(PlanarFreehandContourSegmentationTool);
addTool(SegmentSelectTool);
// Modify annotation tools to use dashed lines on SR // Modify annotation tools to use dashed lines on SR
const annotationStyle = { const annotationStyle = {
textBoxFontSize: '15px', textBoxFontSize: '15px',
@ -150,6 +151,7 @@ const toolNames = {
WindowLevelRegion: WindowLevelRegionTool.toolName, WindowLevelRegion: WindowLevelRegionTool.toolName,
PlanarFreehandContourSegmentation: PlanarFreehandContourSegmentationTool.toolName, PlanarFreehandContourSegmentation: PlanarFreehandContourSegmentationTool.toolName,
SegmentBidirectional: SegmentBidirectionalTool.toolName, SegmentBidirectional: SegmentBidirectionalTool.toolName,
SegmentSelect: SegmentSelectTool.toolName,
}; };
export { toolNames }; export { toolNames };

14
extensions/cornerstone/src/services/SegmentationService/SegmentationService.ts
View File

@ -264,10 +264,14 @@ class SegmentationService extends PubSubService {
{ {
segmentationId, segmentationId,
type, type,
config,
suppressEvents = false, suppressEvents = false,
}: { }: {
segmentationId: string; segmentationId: string;
type?: csToolsEnums.SegmentationRepresentations; type?: csToolsEnums.SegmentationRepresentations;
config?: {
blendMode?: csEnums.BlendModes;
};
suppressEvents?: boolean; suppressEvents?: boolean;
} }
): Promise<void> { ): Promise<void> {
@ -301,7 +305,8 @@ class SegmentationService extends PubSubService {
segmentationId, segmentationId,
representationTypeToUse, representationTypeToUse,
colorLUTIndex, colorLUTIndex,
isConverted isConverted,
config
); );
if (!suppressEvents) { if (!suppressEvents) {
@ -1349,12 +1354,15 @@ class SegmentationService extends PubSubService {
segmentationId: string, segmentationId: string,
representationType: csToolsEnums.SegmentationRepresentations, representationType: csToolsEnums.SegmentationRepresentations,
colorLUTIndex: number, colorLUTIndex: number,
isConverted: boolean isConverted: boolean,
config?: {
blendMode?: csEnums.BlendModes;
}
): Promise<void> { ): Promise<void> {
const representation = { const representation = {
type: representationType, type: representationType,
segmentationId, segmentationId,
config: { colorLUTOrIndex: colorLUTIndex }, config: { colorLUTOrIndex: colorLUTIndex, ...config },
}; };
const addRepresentation = () => const addRepresentation = () =>

22
extensions/cornerstone/src/services/SyncGroupService/createHydrateSegmentationSynchronizer.ts
View File

@ -1,4 +1,4 @@
import { Types, getEnabledElementByViewportId } from '@cornerstonejs/core'; import { Enums as CoreEnums, Types, getEnabledElementByViewportId } from '@cornerstonejs/core';
import { import {
SynchronizerManager, SynchronizerManager,
Synchronizer, Synchronizer,
@ -7,7 +7,8 @@ import {
} from '@cornerstonejs/tools'; } from '@cornerstonejs/tools';
const { createSynchronizer } = SynchronizerManager; const { createSynchronizer } = SynchronizerManager;
const { SEGMENTATION_REPRESENTATION_ADDED } = Enums.Events; const { SEGMENTATION_REPRESENTATION_MODIFIED } = Enums.Events;
const { BlendModes } = CoreEnums;
export default function createHydrateSegmentationSynchronizer( export default function createHydrateSegmentationSynchronizer(
synchronizerName: string, synchronizerName: string,
@ -15,15 +16,16 @@ export default function createHydrateSegmentationSynchronizer(
): Synchronizer { ): Synchronizer {
const stackImageSynchronizer = createSynchronizer( const stackImageSynchronizer = createSynchronizer(
synchronizerName, synchronizerName,
SEGMENTATION_REPRESENTATION_ADDED, SEGMENTATION_REPRESENTATION_MODIFIED,
(synchronizerInstance, sourceViewport, targetViewport, sourceEvent) => (synchronizerInstance, sourceViewport, targetViewport, sourceEvent) => {
segmentationRepresentationModifiedCallback( return segmentationRepresentationModifiedCallback(
synchronizerInstance, synchronizerInstance,
sourceViewport, sourceViewport,
targetViewport, targetViewport,
sourceEvent, sourceEvent,
{ servicesManager, options } { servicesManager, options }
), );
},
{ {
eventSource: 'eventTarget', eventSource: 'eventTarget',
} }
@ -41,8 +43,8 @@ const segmentationRepresentationModifiedCallback = async (
) => { ) => {
const event = sourceEvent as ToolsTypes.EventTypes.SegmentationRepresentationModifiedEventType; const event = sourceEvent as ToolsTypes.EventTypes.SegmentationRepresentationModifiedEventType;
const { segmentationId, viewportId } = event.detail; const { segmentationId } = event.detail;
const { segmentationService, hangingProtocolService } = servicesManager.services; const { segmentationService } = servicesManager.services;
const targetViewportId = targetViewport.viewportId; const targetViewportId = targetViewport.viewportId;
@ -75,5 +77,9 @@ const segmentationRepresentationModifiedCallback = async (
await segmentationService.addSegmentationRepresentation(targetViewportId, { await segmentationService.addSegmentationRepresentation(targetViewportId, {
segmentationId, segmentationId,
type, type,
config: {
blendMode:
viewport.getBlendMode() === 1 ? BlendModes.LABELMAP_EDGE_PROJECTION_BLEND : undefined,
},
}); });
}; };

26
extensions/default/src/ViewerLayout/ViewerHeader.tsx
View File

@ -2,7 +2,7 @@ import React from 'react';
import { useNavigate, useLocation } from 'react-router-dom'; import { useNavigate, useLocation } from 'react-router-dom';
import { useTranslation } from 'react-i18next'; import { useTranslation } from 'react-i18next';
import { Header, useModal } from '@ohif/ui-next'; import { Button, Header, Icons, useModal } from '@ohif/ui-next';
import { useSystem } from '@ohif/core'; import { useSystem } from '@ohif/core';
import { Toolbar } from '../Toolbar/Toolbar'; import { Toolbar } from '../Toolbar/Toolbar';
import HeaderPatientInfo from './HeaderPatientInfo'; import HeaderPatientInfo from './HeaderPatientInfo';
@ -10,7 +10,7 @@ import { PatientInfoVisibility } from './HeaderPatientInfo/HeaderPatientInfo';
import { preserveQueryParameters, publicUrl } from '@ohif/app'; import { preserveQueryParameters, publicUrl } from '@ohif/app';
function ViewerHeader({ appConfig }: withAppTypes<{ appConfig: AppTypes.Config }>) { function ViewerHeader({ appConfig }: withAppTypes<{ appConfig: AppTypes.Config }>) {
const { servicesManager, extensionManager } = useSystem(); const { servicesManager, extensionManager, commandsManager } = useSystem();
const { customizationService } = servicesManager.services; const { customizationService } = servicesManager.services;
const navigate = useNavigate(); const navigate = useNavigate();
@ -94,6 +94,28 @@ function ViewerHeader({ appConfig }: withAppTypes<{ appConfig: AppTypes.Config }
/> />
) )
} }
UndoRedo={
<div className="text-primary-active flex cursor-pointer items-center">
<Button
variant="ghost"
className="hover:bg-primary-dark"
onClick={() => {
commandsManager.run('undo');
}}
>
<Icons.Undo className="" />
</Button>
<Button
variant="ghost"
className="hover:bg-primary-dark"
onClick={() => {
commandsManager.run('redo');
}}
>
<Icons.Redo className="" />
</Button>
</div>
}
> >
<div className="relative flex justify-center gap-[4px]"> <div className="relative flex justify-center gap-[4px]">
<Toolbar servicesManager={servicesManager} /> <Toolbar servicesManager={servicesManager} />

29
extensions/default/src/utils/Toolbox.tsx
View File

@ -1,7 +1,8 @@
import React from 'react'; import React, { useState } from 'react';
import { PanelSection, ToolSettings } from '@ohif/ui-next'; import { Icons, PanelSection, ToolSettings } from '@ohif/ui-next';
import { useSystem, useToolbar } from '@ohif/core'; import { useSystem, useToolbar } from '@ohif/core';
import classnames from 'classnames'; import classnames from 'classnames';
import { useTranslation } from 'react-i18next';
interface ButtonProps { interface ButtonProps {
isActive?: boolean; isActive?: boolean;
@ -20,7 +21,10 @@ interface ButtonProps {
*/ */
export function Toolbox({ buttonSectionId, title }: { buttonSectionId: string; title: string }) { export function Toolbox({ buttonSectionId, title }: { buttonSectionId: string; title: string }) {
const { servicesManager } = useSystem(); const { servicesManager } = useSystem();
const { toolbarService } = servicesManager.services; const { t } = useTranslation();
const { toolbarService, customizationService } = servicesManager.services;
const [showConfig, setShowConfig] = useState(false);
const { toolbarButtons: toolboxSections, onInteraction } = useToolbar({ const { toolbarButtons: toolboxSections, onInteraction } = useToolbar({
servicesManager, servicesManager,
@ -72,12 +76,27 @@ export function Toolbox({ buttonSectionId, title }: { buttonSectionId: string; t
onInteraction?.({ itemId }); onInteraction?.({ itemId });
}; };
const CustomConfigComponent = customizationService.getCustomization(`${buttonSectionId}.config`);
return ( return (
<PanelSection> <PanelSection>
<PanelSection.Header> <PanelSection.Header className="flex items-center justify-between">
<span>{title}</span> <span>{t(title)}</span>
{CustomConfigComponent && (
<div className="ml-auto mr-2">
<Icons.Settings
className="text-primary-active h-4 w-4"
onClick={e => {
e.stopPropagation();
setShowConfig(!showConfig);
}}
/>
</div>
)}
</PanelSection.Header> </PanelSection.Header>
<PanelSection.Content className="flex-shrink-0 border-none"> <PanelSection.Content className="flex-shrink-0 border-none">
{showConfig && <CustomConfigComponent />}
{toolboxSections.map(section => { {toolboxSections.map(section => {
const sectionId = section.componentProps.buttonSection; const sectionId = section.componentProps.buttonSection;
const buttons = toolbarService.getButtonSection(sectionId) as any[]; const buttons = toolbarService.getButtonSection(sectionId) as any[];

4
extensions/measurement-tracking/package.json
View File

@ -32,8 +32,8 @@
"start": "yarn run dev" "start": "yarn run dev"
}, },
"peerDependencies": { "peerDependencies": {
"@cornerstonejs/core": "^3.7.1", "@cornerstonejs/core": "^3.7.5",
"@cornerstonejs/tools": "^3.7.1", "@cornerstonejs/tools": "^3.7.5",
"@ohif/core": "3.10.0-beta.130", "@ohif/core": "3.10.0-beta.130",
"@ohif/extension-cornerstone-dicom-sr": "3.10.0-beta.130", "@ohif/extension-cornerstone-dicom-sr": "3.10.0-beta.130",
"@ohif/extension-default": "3.10.0-beta.130", "@ohif/extension-default": "3.10.0-beta.130",

2
extensions/tmtv/src/Panels/PanelROIThresholdSegmentation/PanelROIThresholdExport.tsx
View File

@ -54,7 +54,6 @@ export default function PanelRoiThresholdSegmentation({
// Find the first segmentation with a TMTV value since all of them have the same value // Find the first segmentation with a TMTV value since all of them have the same value
const stats = segmentationService.getSegmentationGroupStats(segmentationIds); const stats = segmentationService.getSegmentationGroupStats(segmentationIds);
const tmtvValue = stats?.tmtv; const tmtvValue = stats?.tmtv;
const tlgValue = stats?.tlg;
return ( return (
<div className="mt-2 mb-10 flex flex-col"> <div className="mt-2 mb-10 flex flex-col">
@ -65,7 +64,6 @@ export default function PanelRoiThresholdSegmentation({
{'TMTV:'} {'TMTV:'}
</span> </span>
<div className="text-white">{`${tmtvValue?.toFixed(3)} mL`}</div> <div className="text-white">{`${tmtvValue?.toFixed(3)} mL`}</div>
<div className="text-white">{`${tlgValue?.toFixed(3)} mL`}</div>
</div> </div>
) : null} ) : null}
</div> </div>

1
modes/preclinical-4d/src/initToolGroups.tsx
View File

@ -40,6 +40,7 @@ function _initToolGroups(toolNames, Enums, toolGroupService, commandsManager, se
], ],
passive: [ passive: [
{ toolName: toolNames.Length }, { toolName: toolNames.Length },
{ toolName: toolNames.SegmentBidirectional },
{ toolName: toolNames.ArrowAnnotate }, { toolName: toolNames.ArrowAnnotate },
{ toolName: toolNames.Bidirectional }, { toolName: toolNames.Bidirectional },
{ toolName: toolNames.Probe }, { toolName: toolNames.Probe },

9
modes/segmentation/src/initToolGroups.ts
View File

@ -67,9 +67,6 @@ function createTools(utilityModule) {
parentTool: 'Brush', parentTool: 'Brush',
configuration: { configuration: {
activeStrategy: 'THRESHOLD_INSIDE_CIRCLE', activeStrategy: 'THRESHOLD_INSIDE_CIRCLE',
// preview: {
// enabled: true,
// },
threshold: { threshold: {
isDynamic: true, isDynamic: true,
dynamicRadius: 3, dynamicRadius: 3,
@ -79,14 +76,14 @@ function createTools(utilityModule) {
{ {
toolName: toolNames.SegmentBidirectional, toolName: toolNames.SegmentBidirectional,
}, },
{
toolName: toolNames.SegmentSelect,
},
{ {
toolName: 'ThresholdSphereBrushDynamic', toolName: 'ThresholdSphereBrushDynamic',
parentTool: 'Brush', parentTool: 'Brush',
configuration: { configuration: {
activeStrategy: 'THRESHOLD_INSIDE_SPHERE', activeStrategy: 'THRESHOLD_INSIDE_SPHERE',
// preview: {
// enabled: true,
// },
threshold: { threshold: {
isDynamic: true, isDynamic: true,
dynamicRadius: 3, dynamicRadius: 3,

1
modes/tmtv/src/initToolGroups.js
View File

@ -28,6 +28,7 @@ function _initToolGroups(toolNames, Enums, toolGroupService, commandsManager) {
], ],
passive: [ passive: [
{ toolName: toolNames.Length }, { toolName: toolNames.Length },
{ toolName: toolNames.SegmentBidirectional },
{ {
toolName: toolNames.ArrowAnnotate, toolName: toolNames.ArrowAnnotate,
configuration: { configuration: {

2
platform/app/package.json
View File

@ -54,7 +54,7 @@
"@cornerstonejs/codec-libjpeg-turbo-8bit": "^1.2.2", "@cornerstonejs/codec-libjpeg-turbo-8bit": "^1.2.2",
"@cornerstonejs/codec-openjpeg": "^1.2.4", "@cornerstonejs/codec-openjpeg": "^1.2.4",
"@cornerstonejs/codec-openjph": "^2.4.5", "@cornerstonejs/codec-openjph": "^2.4.5",
"@cornerstonejs/dicom-image-loader": "^3.7.1", "@cornerstonejs/dicom-image-loader": "^3.7.5",
"@emotion/serialize": "^1.1.3", "@emotion/serialize": "^1.1.3",
"@ohif/core": "3.10.0-beta.130", "@ohif/core": "3.10.0-beta.130",
"@ohif/extension-cornerstone": "3.10.0-beta.130", "@ohif/extension-cornerstone": "3.10.0-beta.130",

2
platform/core/package.json
View File

@ -37,7 +37,7 @@
"@cornerstonejs/codec-libjpeg-turbo-8bit": "^1.2.2", "@cornerstonejs/codec-libjpeg-turbo-8bit": "^1.2.2",
"@cornerstonejs/codec-openjpeg": "^1.2.4", "@cornerstonejs/codec-openjpeg": "^1.2.4",
"@cornerstonejs/codec-openjph": "^2.4.5", "@cornerstonejs/codec-openjph": "^2.4.5",
"@cornerstonejs/dicom-image-loader": "^3.7.1", "@cornerstonejs/dicom-image-loader": "^3.7.5",
"@ohif/ui": "3.10.0-beta.130", "@ohif/ui": "3.10.0-beta.130",
"cornerstone-math": "0.1.9", "cornerstone-math": "0.1.9",
"dicom-parser": "^1.8.21" "dicom-parser": "^1.8.21"

10
platform/core/src/defaults/hotkeyBindings.ts
View File

@ -167,6 +167,16 @@ const bindings = [
label: 'Delete Annotation', label: 'Delete Annotation',
keys: ['backspace'], keys: ['backspace'],
}, },
{
commandName: 'acceptPreview',
label: 'Accept Preview',
keys: ['enter'],
},
{
commandName: 'rejectPreview',
label: 'Reject Preview',
keys: ['esc'],
},
// after we have the ui for undo/redo, we can add these back in // after we have the ui for undo/redo, we can add these back in
// { // {
// commandName: 'undo', // commandName: 'undo',

6
platform/ui-next/src/components/Header/Header.tsx
View File

@ -29,6 +29,7 @@ interface HeaderProps {
}; };
PatientInfo?: ReactNode; PatientInfo?: ReactNode;
Secondary?: ReactNode; Secondary?: ReactNode;
UndoRedo?: ReactNode;
} }
function Header({ function Header({
@ -39,11 +40,10 @@ function Header({
isSticky = false, isSticky = false,
WhiteLabeling, WhiteLabeling,
PatientInfo, PatientInfo,
UndoRedo,
Secondary, Secondary,
...props ...props
}: HeaderProps): ReactNode { }: HeaderProps): ReactNode {
const { t } = useTranslation('Header');
const onClickReturn = () => { const onClickReturn = () => {
if (isReturnEnabled && onClickReturnButton) { if (isReturnEnabled && onClickReturnButton) {
onClickReturnButton(); onClickReturnButton();
@ -76,6 +76,8 @@ function Header({
<div className="flex items-center justify-center space-x-2">{children}</div> <div className="flex items-center justify-center space-x-2">{children}</div>
</div> </div>
<div className="absolute right-0 top-1/2 flex -translate-y-1/2 select-none items-center"> <div className="absolute right-0 top-1/2 flex -translate-y-1/2 select-none items-center">
{UndoRedo}
<div className="border-primary-dark mx-1.5 h-[25px] border-r"></div>
{PatientInfo} {PatientInfo}
<div className="border-primary-dark mx-1.5 h-[25px] border-r"></div> <div className="border-primary-dark mx-1.5 h-[25px] border-r"></div>
<div className="flex-shrink-0"> <div className="flex-shrink-0">

6
platform/ui-next/src/components/SegmentationTable/SegmentationTable.tsx
View File

@ -1,11 +1,7 @@
import React, { ReactNode, useState, Children, isValidElement } from 'react'; import React, { ReactNode, useState, Children, isValidElement } from 'react';
import { useTranslation } from 'react-i18next'; import { useTranslation } from 'react-i18next';
import { PanelSection } from '../PanelSection'; import { PanelSection } from '../PanelSection';
import { import { SegmentationTableProvider, SegmentationTableContextType } from './contexts';
SegmentationTableProvider,
SegmentationTableContextType,
ViewportSegmentationInfo,
} from './contexts';
import { SegmentationSegments } from './SegmentationSegments'; import { SegmentationSegments } from './SegmentationSegments';
import { SegmentStatistics } from './SegmentStatistics'; import { SegmentStatistics } from './SegmentStatistics';
import { SegmentationTableConfig } from './SegmentationTableConfig'; import { SegmentationTableConfig } from './SegmentationTableConfig';

48
yarn.lock
View File

@ -1393,10 +1393,10 @@
resolved "https://registry.yarnpkg.com/@colors/colors/-/colors-1.5.0.tgz#bb504579c1cae923e6576a4f5da43d25f97bdbd9" resolved "https://registry.yarnpkg.com/@colors/colors/-/colors-1.5.0.tgz#bb504579c1cae923e6576a4f5da43d25f97bdbd9"
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"@cornerstonejs/adapters@^3.7.1": "@cornerstonejs/adapters@^3.7.5":
version "3.7.1" version "3.7.5"
resolved "https://registry.yarnpkg.com/@cornerstonejs/adapters/-/adapters-3.7.1.tgz#9d5babdd00fc08e54aa57c14a7d36d2854ebd01c" resolved "https://registry.yarnpkg.com/@cornerstonejs/adapters/-/adapters-3.7.5.tgz#d5199f8aef9f9ba176183f9d123b3a0e32622813"
integrity sha512-aREkDwxmoIxBT4xJs00i7ghI9kCdKa7hmmDdCxw54lD0kI6aGLAHrwIeeYl+C19suyNH18duwuy1E/GYLfg5pA== integrity sha512-Pdrlx1dYVe/nakC7geec8QOQwqi4hJaAgTpN18y+/a7Vk3wpzj+/q+vf03lt4BhUygAu9+3t5gAUDm0kzXq02g==
dependencies: dependencies:
"@babel/runtime-corejs2" "^7.17.8" "@babel/runtime-corejs2" "^7.17.8"
buffer "^6.0.3" buffer "^6.0.3"
@ -1429,20 +1429,20 @@
resolved "https://registry.yarnpkg.com/@cornerstonejs/codec-openjph/-/codec-openjph-2.4.5.tgz#8690b61a86fa53ef38a70eee9d665a79229517c0" resolved "https://registry.yarnpkg.com/@cornerstonejs/codec-openjph/-/codec-openjph-2.4.5.tgz#8690b61a86fa53ef38a70eee9d665a79229517c0"
integrity sha512-MZCUy8VG0VG5Nl1l58+g+kH3LujAzLYTfJqkwpWI2gjSrGXnP6lgwyy4GmPRZWVoS40/B1LDNALK905cNWm+sg== integrity sha512-MZCUy8VG0VG5Nl1l58+g+kH3LujAzLYTfJqkwpWI2gjSrGXnP6lgwyy4GmPRZWVoS40/B1LDNALK905cNWm+sg==
"@cornerstonejs/core@^3.7.1": "@cornerstonejs/core@^3.7.5":
version "3.7.1" version "3.7.5"
resolved "https://registry.yarnpkg.com/@cornerstonejs/core/-/core-3.7.1.tgz#409fad60fa933219f5b1e5757c9dbaead058338c" resolved "https://registry.yarnpkg.com/@cornerstonejs/core/-/core-3.7.5.tgz#16572c18c4cdbf0ffeb6f39675025263ce2099bf"
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dependencies: dependencies:
"@kitware/vtk.js" "32.12.1" "@kitware/vtk.js" "32.12.1"
comlink "^4.4.1" comlink "^4.4.1"
gl-matrix "^3.4.3" gl-matrix "^3.4.3"
loglevel "^1.9.2" loglevel "^1.9.2"
"@cornerstonejs/dicom-image-loader@^3.7.1": "@cornerstonejs/dicom-image-loader@^3.7.5":
version "3.7.1" version "3.7.5"
resolved "https://registry.yarnpkg.com/@cornerstonejs/dicom-image-loader/-/dicom-image-loader-3.7.1.tgz#c6744624387b5a5056f416d2adebafe0fdda8a48" resolved "https://registry.yarnpkg.com/@cornerstonejs/dicom-image-loader/-/dicom-image-loader-3.7.5.tgz#ad010a5c066f4ae4c118c2ce52625d7ee3ad665e"
integrity sha512-mfbZ4PjLIGRh9CaMGxw0I4skI0y3sG+z0SlH40m/cwWvfKj18T5iqoLVSovSnYhqCcKdSyljM/ZTAj1t0vfRVQ== integrity sha512-bDm4hx9NagD7tTU//ls+Z+U8duYgunOfLsAiU6SvNfB2vEINOSHVSnz7pAcnzfnE21ObJYnZnmH5aa8/sa/xCg==
dependencies: dependencies:
"@cornerstonejs/codec-charls" "^1.2.3" "@cornerstonejs/codec-charls" "^1.2.3"
"@cornerstonejs/codec-libjpeg-turbo-8bit" "^1.2.2" "@cornerstonejs/codec-libjpeg-turbo-8bit" "^1.2.2"
@ -1454,25 +1454,25 @@
pako "^2.0.4" pako "^2.0.4"
uuid "^9.0.0" uuid "^9.0.0"
"@cornerstonejs/labelmap-interpolation@^3.7.1": "@cornerstonejs/labelmap-interpolation@^3.7.5":
version "3.7.1" version "3.7.5"
resolved "https://registry.yarnpkg.com/@cornerstonejs/labelmap-interpolation/-/labelmap-interpolation-3.7.1.tgz#e82c887ffb3f2c3cba77c7ad84b26812aecd6a44" resolved "https://registry.yarnpkg.com/@cornerstonejs/labelmap-interpolation/-/labelmap-interpolation-3.7.5.tgz#7947d909ff667484abaa484267965c1ad6f91da9"
integrity sha512-D9VwRPeWlIMfbGD9e5R+zPQLiqKmP0sz3kMN6pxEiDbHpJ6QirtgyJyzZRI3+Z68zL2mxUDNLbfw0GbYm9fhEg== integrity sha512-mIdT8qzQpps1my6daRMAQDejhAAj6QGvkZyU4vbcqIHqqEnWezWFdKNWIlZhm6MX52Vy3Jnl7qBlQ8JtPd+5gQ==
dependencies: dependencies:
"@itk-wasm/morphological-contour-interpolation" "1.1.0" "@itk-wasm/morphological-contour-interpolation" "1.1.0"
itk-wasm "1.0.0-b.165" itk-wasm "1.0.0-b.165"
"@cornerstonejs/polymorphic-segmentation@^3.7.1": "@cornerstonejs/polymorphic-segmentation@^3.7.5":
version "3.7.1" version "3.7.5"
resolved "https://registry.yarnpkg.com/@cornerstonejs/polymorphic-segmentation/-/polymorphic-segmentation-3.7.1.tgz#364a25cd10fba06dc1667d6a53b2ccd91250ffc2" resolved "https://registry.yarnpkg.com/@cornerstonejs/polymorphic-segmentation/-/polymorphic-segmentation-3.7.5.tgz#6c322de19dfb55cee9ca6a813821be906bea9fbb"
integrity sha512-CRmSSgngzQqfBIiOmVFLzcM9lmDw2ueH/Co44/RDuo437J8mTG3QfDBmKoRt0VhlkiWy+C/cVMKqHwZ63Xl7Og== integrity sha512-+4T5yKjfd0b4dGqy/Tj/V5biuQgjvJVkUv7qe5xU8L/0f8irvr4XtfYoeX9Hoo/iFrYKxdI5LrC35rsKWJttpQ==
dependencies: dependencies:
"@icr/polyseg-wasm" "0.4.0" "@icr/polyseg-wasm" "0.4.0"
"@cornerstonejs/tools@^3.7.1": "@cornerstonejs/tools@^3.7.5":
version "3.7.1" version "3.7.5"
resolved "https://registry.yarnpkg.com/@cornerstonejs/tools/-/tools-3.7.1.tgz#19458b127b4570314f1a35d04081f59850af5bdc" resolved "https://registry.yarnpkg.com/@cornerstonejs/tools/-/tools-3.7.5.tgz#5ecdf5669640e0fc57cbae49650aa841decba313"
integrity sha512-OVLfmGmQBuR9Ig1ZKy35EjwRLv6zNs6q4hrXf9EoIysMSH/mYB+V4n9/FQsqnlVh4IN0DuBqkwoUmBaGSPkspQ== integrity sha512-9GcUI0meHqsO8uzePwv7k99Knr1ta6Q0OCb5AmTKGP6u6ZSEAi1aj2pBSoFZPlG/2vhcXh2NYHkNmeLTYlTP1g==
dependencies: dependencies:
"@types/offscreencanvas" "2019.7.3" "@types/offscreencanvas" "2019.7.3"
comlink "^4.4.1" comlink "^4.4.1"