Merge branch 'master' into chore/core-cleanup

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Danny Brown 2019-08-22 09:32:07 -04:00 committed by GitHub
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16 changed files with 84 additions and 66 deletions

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@ -27,4 +27,4 @@ mv platform/viewer/dist/* .netlify/www/pwa -v
echo 'Nothing left to see here. Go home, folks.'
# Build using react-scripts
# npx cross-env PUBLIC_URL=/demo REACT_APP_CONFIG=config/netlify.js react-scripts --max_old_space_size=4096 build
# npx cross-env PUBLIC_URL=/demo APP_CONFIG=config/netlify.js react-scripts --max_old_space_size=4096 build

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@ -10,7 +10,7 @@
<!-- CORNERSTONE.js -->
<tr>
<td>
<a href="https://www.npmjs.com/package/ohif-cornerstone-extension">
<a href="https://www.npmjs.com/package/@ohif/extension-cornerstone">
Cornerstone
</a>
</td>
@ -22,7 +22,7 @@
<!-- VTK.js -->
<tr>
<td>
<a href="https://www.npmjs.com/package/ohif-vtk-extension">
<a href="https://www.npmjs.com/package/@ohif/extension-vtk">
VTK.js
</a>
</td>
@ -33,30 +33,30 @@
</tr>
<tr>
<td>
<a href="">HTML</a>
<a href="https://www.npmjs.com/package/@ohif/extension-dicom-html">DICOM HTML</a>
</td>
<td>
Renders text and HTML content for <a href="https://github.com/OHIF/Viewers/blob/react/extensions/ohif-dicom-html-extension/src/OHIFDicomHtmlSopClassHandler.js#L7-L15">specific SopClassUIDs</a>.
Renders text and HTML content for <a href="https://github.com/OHIF/Viewers/blob/master/extensions/dicom-html/src/OHIFDicomHtmlSopClassHandler.js#L4-L12">specific SopClassUIDs</a>.
</td>
<td>Viewport, SopClassHandler</td>
</tr>
<tr>
<td>
<a href="https://www.npmjs.com/package/ohif-dicom-pdf-extension">PDF</a>
<a href="https://www.npmjs.com/package/@ohif/extension-dicom-pdf">DICOM PDF</a>
</td>
<td>
Renders PDFs for a <a href="https://github.com/OHIF/Viewers/blob/react/extensions/ohif-dicom-pdf-extension/src/OHIFDicomPDFSopClassHandler.js#L8">specific SopClassUID</a>.
Renders PDFs for a <a href="https://github.com/OHIF/Viewers/blob/master/extensions/dicom-pdf/src/OHIFDicomPDFSopClassHandler.js#L4-L6">specific SopClassUID</a>.
</td>
<td>Viewport, SopClassHandler</td>
</tr>
<tr>
<td>
<a href="https://www.npmjs.com/package/ohif-dicom-microscopy-extension">Microscopy</a>
<a href="https://www.npmjs.com/package/@ohif/extension-dicom-microscopy">DICOM Microscopy</a>
</td>
<td>
Renders Microscopy images for a <a href="https://github.com/OHIF/Viewers/blob/react/extensions/ohif-dicom-microscopy-extension/src/DicomMicroscopySopClassHandler.js#L6">specific SopClassUID</a>.
Renders Microscopy images for a <a href="https://github.com/OHIF/Viewers/blob/master/extensions/dicom-microscopy/src/DicomMicroscopySopClassHandler.js#L5-L7">specific SopClassUID</a>.
</td>
<td>Viewport, SopClassHandler</td>
</tr>
</tbody>
</table>
</table>

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@ -152,7 +152,7 @@ is used depends on:
<center><i>An example of three Viewports</i></center>
For a complete example implementation,
[check out the OHIFCornerstoneViewport](https://github.com/OHIF/Viewers/blob/react/extensions/ohif-cornerstone-extension/src/OHIFCornerstoneViewport.js).
[check out the OHIFCornerstoneViewport](https://github.com/OHIF/Viewers/blob/master/extensions/cornerstone/src/OHIFCornerstoneViewport.js).
#### Toolbar
@ -168,7 +168,7 @@ store.
Toolbar components are rendered in the `ToolbarRow` component.
For a complete example implementation,
[check out the OHIFCornerstoneViewport's Toolbar Module](https://github.com/OHIF/Viewers/blob/react/extensions/ohif-cornerstone-extension/src/ToolbarModule.js).
[check out the OHIFCornerstoneViewport's Toolbar Module](https://github.com/OHIF/Viewers/blob/master/extensions/cornerstone/src/toolbarModule.js).
#### SopClassHandler
@ -197,9 +197,9 @@ would like included at startup.
_app.js_
```js
import { createStore, combineReducers } from "redux";
import OHIF from "@ohif/core";
import OHIFCornerstoneExtension from "ohif-cornerstone-extension";
import { createStore, combineReducers } from 'redux';
import OHIF from '@ohif/core';
import OHIFCornerstoneExtension from 'ohif-cornerstone-extension';
const combined = combineReducers(OHIF.redux.reducers);
const store = createStore(combined);
@ -214,8 +214,8 @@ ExtensionManager.registerExtensions(store, extensions);
A small number of powerful extensions for popular use cases are maintained by
OHIF. They're co-located in the
[`OHIF/Viewers`](https://github.com/OHIF/Viewers/tree/react/) repository, in the
top level [`extensions/`](https://github.com/OHIF/Viewers/tree/react/extensions)
[`OHIF/Viewers`](https://github.com/OHIF/Viewers) repository, in the top level
[`extensions/`](https://github.com/OHIF/Viewers/tree/master/extensions)
directory.
{% include "./_maintained-extensions-table.md" %}
@ -225,6 +225,6 @@ directory.
-->
<!-- prettier-ignore-start -->
[example-ext-src]: https://github.com/OHIF/Viewers/blob/master/extensions/_ohif-example-extension/src/index.js)
[module-types]: https://github.com/OHIF/ohif-core/blob/43c08a29eff3fb646a0e83a03a236ddd84f4a6e8/src/plugins.js#L1-L6
[example-ext-src]: https://github.com/OHIF/Viewers/tree/master/extensions/_example/src
[module-types]: https://github.com/OHIF/Viewers/blob/master/platform/core/src/extensions/MODULE_TYPES.js
<!-- prettier-ignore-end -->

View File

@ -53,7 +53,7 @@ Images can even be transcoded on the fly if this is desired.
```bash
cd OHIFViewer
yarn install
REACT_APP_CONFIG=config/google.js yarn run dev
APP_CONFIG=config/google.js yarn run dev
```
## Running via Docker

View File

@ -71,11 +71,11 @@ how to configure the project for your own imaging archive below.
#### How it Works
The configuration for our project is in the `/public/config` directory. Our
build process knows which configuration file to use based on the
`REACT_APP_CONFIG` environment variable. By default, its value is
[`default.js`](https://github.com/OHIF/Viewers/blob/react/public/config/default.js).
When we build, the `%REACT_APP_CONFIG%` value in
our[`/public/index.html`](https://github.com/OHIF/Viewers/blob/react/public/index.html#L12-L15)
build process knows which configuration file to use based on the `APP_CONFIG`
environment variable. By default, its value is
[`default.js`](https://github.com/OHIF/Viewers/blob/master/platform/viewer/public/config/default.js).
When we build, the `%APP_CONFIG%` value in
our[`/public/index.html`](https://github.com/OHIF/Viewers/blob/master/platform/viewer/public/index.html)
file is substituted for the correct configuration file's name. This sets
the`window.config` equal to our configuration file's value.
@ -104,17 +104,17 @@ window.config = {
},
],
},
}
};
```
You can also create a new config file and specify its path relative to the build
output's root by setting the `REACT_APP_CONFIG` environment variable. You can
set the value of this environment variable a few different ways:
output's root by setting the `APP_CONFIG` environment variable. You can set the
value of this environment variable a few different ways:
- [Add a temporary environment variable in your shell](https://facebook.github.io/create-react-app/docs/adding-custom-environment-variables#adding-temporary-environment-variables-in-your-shell)
- [Add environment specific variables in `.env` file(s)](https://facebook.github.io/create-react-app/docs/adding-custom-environment-variables#adding-development-environment-variables-in-env)
- Using the `cross-env` package in an npm script:
- `"build": "cross-env REACT_APP_CONFIG=config/my-config.js react-scripts build"`
- `"build": "cross-env APP_CONFIG=config/my-config.js react-scripts build"`
After updating the configuration, `yarn run build:web` to generate updated build
output.

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@ -11,7 +11,7 @@ control.
Do not use this recipe to host sensitive medical data on the open web. Depending
on your company's policies, this may be an appropriate setup on an internal
network when protected with a server's basic authentication. For a more robust
setup, check out our [user account control recpie](./user-account-control.md)
setup, check out our [user account control recipe](./user-account-control.md)
that builds on the lessons learned here.
## Overview
@ -51,7 +51,7 @@ We can solve this one of two ways:
This solution uses the first approach, but you can see an example of the second
in the `docker-compose` bundled with this project for local development:
[HERE](#)
[HERE](https://github.com/OHIF/Viewers/blob/master/platform/viewer/.recipes/Nginx-Orthanc/docker-compose.yml)
You can read more about CORS in this Medium article: [Understanding
CORS][understanding-cors]
@ -124,10 +124,10 @@ likely want to update:
The OHIF Viewer's configuration is imported from a static `.js` file and made
available globally at `window.config`. The configuration we use is set to a
specific file when we build the viewer, and determined by the env variable:
`REACT_APP_CONFIG`. You can see where we set its value in the `dockerfile` for
this solution:
`APP_CONFIG`. You can see where we set its value in the `dockerfile` for this
solution:
`ENV REACT_APP_CONFIG=config/docker_openresty-orthanc.js`
`ENV APP_CONFIG=config/docker_openresty-orthanc.js`
You can find the configuration we're using here:
`/public/config/docker_openresty-orthanc.js`

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@ -125,10 +125,10 @@ likely want to update:
The OHIF Viewer's configuration is imported from a static `.js` file and made
available globally at `window.config`. The configuration we use is set to a
specific file when we build the viewer, and determined by the env variable:
`REACT_APP_CONFIG`. You can see where we set its value in the `dockerfile` for
this solution:
`APP_CONFIG`. You can see where we set its value in the `dockerfile` for this
solution:
`ENV REACT_APP_CONFIG=config/docker_openresty-orthanc-keycloak.js`
`ENV APP_CONFIG=config/docker_openresty-orthanc-keycloak.js`
You can find the configuration we're using here:
`/public/config/docker_openresty-orthanc-keycloak.js`
@ -281,9 +281,9 @@ community members put together:
[orthanc-docs]: http://book.orthanc-server.com/users/configuration.html#configuration
[lua-resty-openidc-docs]: https://github.com/zmartzone/lua-resty-openidc
<!-- SRC -->
[config]: #
[dockerfile]: #
[config-nginx]: #
[config-orthanc]: #
[config-keycloak]: #
[config]: https://github.com/OHIF/Viewers/blob/master/platform/viewer/src/config.js
[dockerfile]: https://github.com/OHIF/Viewers/tree/master/platform/viewer/.recipes
[config-nginx]: https://github.com/OHIF/Viewers/tree/master/platform/viewer/.recipes
[config-orthanc]: https://github.com/OHIF/Viewers/tree/master/platform/viewer/.recipes
[config-keycloak]: https://github.com/OHIF/Viewers/tree/master/platform/viewer/.recipes
<!-- prettier-ignore-end -->

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@ -7,11 +7,11 @@
## How it Works
The configuration for our project is in the `/public/config` directory. Our
build process knows which configuration file to use based on the
`REACT_APP_CONFIG` environment variable. By default, its value is
[`default.js`](https://github.com/OHIF/Viewers/blob/react/public/config/default.js).
When we build, the `%REACT_APP_CONFIG%` value in
our[`/public/index.html`](https://github.com/OHIF/Viewers/blob/react/public/index.html#L12-L15)
build process knows which configuration file to use based on the `APP_CONFIG`
environment variable. By default, its value is
[`default.js`](https://github.com/OHIF/Viewers/blob/master/platform/viewer/public/config/default.js).
When we build, the `%APP_CONFIG%` value in
our[`/public/index.html`](https://github.com/OHIF/Viewers/blob/master/platform/viewer/public/index.html)
file is substituted for the correct configuration file's name. This sets the
`window.config` equal to our configuration file's value.
@ -40,17 +40,17 @@ window.config = {
},
],
},
}
};
```
You can also create a new config file and specify its path relative to the build
output's root by setting the `REACT_APP_CONFIG` environment variable. You can
set the value of this environment variable a few different ways:
output's root by setting the `APP_CONFIG` environment variable. You can set the
value of this environment variable a few different ways:
- [Add a temporary environment variable in your shell](https://facebook.github.io/create-react-app/docs/adding-custom-environment-variables#adding-temporary-environment-variables-in-your-shell)
- [Add environment specific variables in `.env` file(s)](https://facebook.github.io/create-react-app/docs/adding-custom-environment-variables#adding-development-environment-variables-in-env)
- Using the `cross-env` package in an npm script:
- `"build": "cross-env REACT_APP_CONFIG=config/my-config.js react-scripts build"`
- `"build": "cross-env APP_CONFIG=config/my-config.js react-scripts build"`
After updating the configuration, `yarn run build:web` to generate updated build
output.

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@ -60,8 +60,8 @@ _Upload your first Study:_
#### Orthanc: Learn More
You can see the `docker-compose.yml` file this command runs at
[`<project-root>/docker/Nginx-Docker/`](#), and more on Orthanc for Docker in
[Orthanc's documentation][orthanc-docker].
[`<project-root>/platform/viewer/.recipes/Nginx-Orthanc/`](https://github.com/OHIF/Viewers/tree/master/platform/viewer/.recipes/Nginx-Orthanc),
and more on Orthanc for Docker in [Orthanc's documentation][orthanc-docker].
### Connecting to Orthanc
@ -87,19 +87,18 @@ is running the `dev:orthanc` script in our project's `package.json`. That script
is:
```js
cross-env PORT=5000 REACT_APP_CONFIG=config/docker_nginx-orthanc.js react-scripts start
cross-env PORT=5000 APP_CONFIG=config/docker_nginx-orthanc.js react-scripts start
```
- `cross-env` sets two environment variables
- PORT: 5000
- REACT_APP_CONFIG: `config/docker_nginx-orthanc.js`
- APP_CONFIG: `config/docker_nginx-orthanc.js`
- `react-scripts` runs it's `start` script. This is [the de-facto
way][cra-start] to run a "Create React App" in development mode.
The `REACT_APP_CONFIG` value tells our app which file to load on to
`window.config`. By default, our app uses the file at
`<project-root>/public/config/default.js`. Here is what that configuration looks
like:
The `APP_CONFIG` value tells our app which file to load on to `window.config`.
By default, our app uses the file at `<project-root>/public/config/default.js`.
Here is what that configuration looks like:
```js
window.config = {

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@ -37,8 +37,8 @@ Some tips for filing a new issue:
At the moment we are in the process of defining our roadmap and will do our best
to communicate this to the community. If your requested feature is on the
roadmap, then it will most likely be built at some point. If it is not, you are
welcome to build it yourself and [contribute it](../contributing.md). If you
have resources and would like to fund the development of a feature, please
welcome to build it yourself and [contribute it](contributing.md). If you have
resources and would like to fund the development of a feature, please
[contact us](http://www.ohif.org).
### Who should I contact about Academic Collaborations?

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@ -69,7 +69,7 @@ services:
# - orthanc
environment:
- NODE_ENV=production
- REACT_APP_CONFIG=config/local_dcm4chee
- APP_CONFIG=config/local_dcm4chee
restart: always
networks:
- dcm4che_default

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@ -28,7 +28,7 @@ FROM node:11.2.0-slim as builder
RUN mkdir /usr/src/app
WORKDIR /usr/src/app
ENV REACT_APP_CONFIG=config/docker_openresty-orthanc-keycloak.js
ENV APP_CONFIG=config/docker_openresty-orthanc-keycloak.js
ENV PATH /usr/src/app/node_modules/.bin:$PATH
COPY package.json /usr/src/app/package.json

View File

@ -28,7 +28,7 @@ FROM node:11.2.0-slim as builder
RUN mkdir /usr/src/app
WORKDIR /usr/src/app
ENV REACT_APP_CONFIG=config/docker_openresty-orthanc.js
ENV APP_CONFIG=config/docker_openresty-orthanc.js
ENV PATH /usr/src/app/node_modules/.bin:$PATH
COPY package.json /usr/src/app/package.json

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@ -3,6 +3,25 @@
All notable changes to this project will be documented in this file.
See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
## [0.50.5](https://github.com/OHIF/Viewers/compare/@ohif/viewer@0.50.4...@ohif/viewer@0.50.5) (2019-08-21)
### Bug Fixes
* **StandaloneRouting:** Promise rejection - added `return` ([#791](https://github.com/OHIF/Viewers/issues/791)) ([d09fb4e](https://github.com/OHIF/Viewers/commit/d09fb4e))
## [0.50.4](https://github.com/OHIF/Viewers/compare/@ohif/viewer@0.50.3...@ohif/viewer@0.50.4) (2019-08-20)
**Note:** Version bump only for package @ohif/viewer
## [0.50.3](https://github.com/OHIF/Viewers/compare/@ohif/viewer@0.50.2...@ohif/viewer@0.50.3) (2019-08-15)
**Note:** Version bump only for package @ohif/viewer

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@ -1,6 +1,6 @@
{
"name": "@ohif/viewer",
"version": "0.50.3",
"version": "0.50.5",
"description": "OHIF Viewer",
"author": "OHIF Contributors",
"license": "MIT",

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@ -26,7 +26,7 @@ class StandaloneRouting extends Component {
const url = query.url;
if (!url) {
reject(new Error("No URL was specified. Use ?url=$yourURL"));
return reject(new Error("No URL was specified. Use ?url=$yourURL"));
}
// Define a request to the server to retrieve the study data