feat(dicomImageLoader): replace wado image loader with the new library (#3339)
* use new dicom image loader instead of cswil new dicom image loader fails update dicom image loader update yarn lock modify webpack * update webpack * fix webpack * update package versions * update package versions
This commit is contained in:
Alireza
GitHub
parent
66863281c4
commit
eea0ed487b
@ -103,8 +103,8 @@ module.exports = (env, argv, { SRC_DIR, DIST_DIR }) => {
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'@hooks': path.resolve(__dirname, '../platform/viewer/src/hooks'),
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'@routes': path.resolve(__dirname, '../platform/viewer/src/routes'),
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'@state': path.resolve(__dirname, '../platform/viewer/src/state'),
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'cornerstone-wado-image-loader':
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'cornerstone-wado-image-loader/dist/dynamic-import/cornerstoneWADOImageLoader.min.js',
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'@cornerstonejs/dicom-image-loader':
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'@cornerstonejs/dicom-image-loader/dist/dynamic-import/cornerstoneDICOMImageLoader.min.js',
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},
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// Which directories to search when resolving modules
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modules: [
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@ -47,6 +47,6 @@
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"classnames": "^2.3.2",
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"@cornerstonejs/adapters": "^0.6.0",
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"@cornerstonejs/core": "^0.42.2",
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"@cornerstonejs/tools": "^0.63.2"
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"@cornerstonejs/tools": "^0.65.0"
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}
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}
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@ -34,7 +34,11 @@
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"peerDependencies": {
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"@ohif/core": "^3.0.0",
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"@ohif/ui": "^2.0.0",
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"cornerstone-wado-image-loader": "^4.13.0",
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"@cornerstonejs/dicom-image-loader": "^0.4.0",
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"@cornerstonejs/codec-charls": "^1.2.3",
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"@cornerstonejs/codec-libjpeg-turbo-8bit": "^1.2.2",
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"@cornerstonejs/codec-openjpeg": "^1.2.2",
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"@cornerstonejs/codec-openjph": "^2.4.2",
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"dcmjs": "^0.29.5",
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"dicom-parser": "^1.8.9",
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"hammerjs": "^2.0.8",
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@ -50,8 +54,8 @@
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"@babel/runtime": "^7.20.13",
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"@cornerstonejs/adapters": "^0.6.0",
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"@cornerstonejs/core": "^0.42.2",
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"@cornerstonejs/streaming-image-volume-loader": "^0.16.2",
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"@cornerstonejs/tools": "^0.63.2",
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"@cornerstonejs/streaming-image-volume-loader": "^0.18.0",
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"@cornerstonejs/tools": "^0.65.0",
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"@kitware/vtk.js": "26.5.6",
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"html2canvas": "^1.4.1",
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"lodash.debounce": "4.0.8",
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@ -1,9 +1,9 @@
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import * as cornerstone from '@cornerstonejs/core';
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import { volumeLoader } from '@cornerstonejs/core';
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import { cornerstoneStreamingImageVolumeLoader } from '@cornerstonejs/streaming-image-volume-loader';
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import cornerstoneWADOImageLoader, {
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import dicomImageLoader, {
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webWorkerManager,
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} from 'cornerstone-wado-image-loader';
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} from '@cornerstonejs/dicom-image-loader';
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import dicomParser from 'dicom-parser';
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import { errorHandler } from '@ohif/core';
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@ -28,7 +28,7 @@ function initWebWorkers(appConfig) {
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};
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if (!initialized) {
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cornerstoneWADOImageLoader.webWorkerManager.initialize(config);
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dicomImageLoader.webWorkerManager.initialize(config);
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initialized = true;
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}
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}
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@ -37,18 +37,18 @@ export default function initWADOImageLoader(
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userAuthenticationService,
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appConfig
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) {
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cornerstoneWADOImageLoader.external.cornerstone = cornerstone;
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cornerstoneWADOImageLoader.external.dicomParser = dicomParser;
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dicomImageLoader.external.cornerstone = cornerstone;
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dicomImageLoader.external.dicomParser = dicomParser;
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registerVolumeLoader(
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'cornerstoneStreamingImageVolume',
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cornerstoneStreamingImageVolumeLoader
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);
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cornerstoneWADOImageLoader.configure({
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dicomImageLoader.configure({
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decodeConfig: {
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// !! IMPORTANT !!
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// We should set this flag to false, since, by default cornerstone-wado-image-loader
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// We should set this flag to false, since, by default @cornerstonejs/dicom-image-loader
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// will convert everything to integers (to be able to work with cornerstone-2d).
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// Until the default is set to true (which is the case for cornerstone3D),
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// we should set this flag to false.
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@ -1,5 +1,5 @@
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import { imageLoader } from '@cornerstonejs/core';
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import cornerstoneWADOImageLoader from 'cornerstone-wado-image-loader';
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import dicomImageLoader from '@cornerstonejs/dicom-image-loader';
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import { api } from 'dicomweb-client';
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import { DICOMWeb, errorHandler } from '@ohif/core';
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@ -114,7 +114,7 @@ class DicomLoaderService {
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}
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if (!someInvalidStrings(imageId)) {
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return cornerstoneWADOImageLoader.wadouri.loadFileRequest(imageId);
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return dicomImageLoader.wadouri.loadFileRequest(imageId);
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}
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}
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@ -8,7 +8,7 @@ async function getStudiesForPatientByStudyInstanceUID(
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// TODO: The `DicomMetadataStore` should short-circuit both of these requests
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// Data _could_ be here from route query, or if using JSON data source
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// We could also force this to "await" these values being available in the DICOMStore?
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// Kind of like promise fulfillment in cornerstone-wado-image-loader when there are multiple
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// Kind of like promise fulfillment in @cornerstonejs/dicom-image-loader when there are multiple
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// outgoing requests for the same data
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const getStudyResult = await dataSource.query.studies.search({
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studyInstanceUid: StudyInstanceUID,
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@ -33,7 +33,7 @@
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"@ohif/core": "^3.0.0",
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"classnames": "^2.3.2",
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"@cornerstonejs/core": "^0.42.2",
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"@cornerstonejs/tools": "^0.63.2",
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"@cornerstonejs/tools": "^0.65.0",
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"@ohif/extension-cornerstone-dicom-sr": "^3.0.0",
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"dcmjs": "^0.29.5",
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"lodash.debounce": "^4.17.21",
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@ -8,7 +8,7 @@ async function getStudiesForPatientByStudyInstanceUID(
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// TODO: The `DicomMetadataStore` should short-circuit both of these requests
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// Data _could_ be here from route query, or if using JSON data source
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// We could also force this to "await" these values being available in the DICOMStore?
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// Kind of like promise fulfillment in cornerstone-wado-image-loader when there are multiple
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// Kind of like promise fulfillment in @cornerstonejs/dicom-image-loader when there are multiple
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// outgoing requests for the same data
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const getStudyResult = await dataSource.query.studies.search({
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studyInstanceUid: StudyInstanceUID,
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@ -32,7 +32,11 @@
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},
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"peerDependencies": {
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"cornerstone-math": "0.1.9",
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"cornerstone-wado-image-loader": "^4.13.0",
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"@cornerstonejs/dicom-image-loader": "^0.4.0",
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"@cornerstonejs/codec-charls": "^1.2.3",
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"@cornerstonejs/codec-libjpeg-turbo-8bit": "^1.2.2",
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"@cornerstonejs/codec-openjpeg": "^1.2.2",
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"@cornerstonejs/codec-openjph": "^2.4.2",
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"dicom-parser": "^1.8.9",
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"@ohif/ui": "^2.0.0"
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},
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@ -116,14 +116,14 @@ class MetadataProvider {
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return instance[naturalizedTagOrWADOImageLoaderTag];
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}
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// Maybe its a legacy CornerstoneWADOImageLoader tag then:
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return this._getCornerstoneWADOImageLoaderTag(
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// Maybe its a legacy dicomImageLoader tag then:
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return this._getCornerstoneDICOMImageLoaderTag(
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naturalizedTagOrWADOImageLoaderTag,
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instance
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);
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}
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_getCornerstoneWADOImageLoaderTag(wadoImageLoaderTag, instance) {
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_getCornerstoneDICOMImageLoaderTag(wadoImageLoaderTag, instance) {
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let metadata;
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switch (wadoImageLoaderTag) {
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@ -496,7 +496,7 @@ const metadataProvider = new MetadataProvider();
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export default metadataProvider;
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const WADO_IMAGE_LOADER_TAGS = {
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// CornerstoneWADOImageLoader specific
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// dicomImageLoader specific
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GENERAL_SERIES_MODULE: 'generalSeriesModule',
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PATIENT_STUDY_MODULE: 'patientStudyModule',
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IMAGE_PLANE_MODULE: 'imagePlaneModule',
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@ -124,7 +124,7 @@ module.exports = (env, argv) => {
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patterns: [
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{
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from:
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'../../../node_modules/cornerstone-wado-image-loader/dist/dynamic-import',
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'../../../node_modules/@cornerstonejs/dicom-image-loader/dist/dynamic-import',
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to: DIST_DIR,
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},
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],
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@ -66,7 +66,11 @@
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"config-point": "^0.4.8",
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"core-js": "^3.16.1",
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"cornerstone-math": "^0.1.9",
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"cornerstone-wado-image-loader": "^4.13.0",
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"@cornerstonejs/dicom-image-loader": "^0.4.0",
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"@cornerstonejs/codec-charls": "^1.2.3",
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"@cornerstonejs/codec-libjpeg-turbo-8bit": "^1.2.2",
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"@cornerstonejs/codec-openjpeg": "^1.2.2",
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"@cornerstonejs/codec-openjph": "^2.4.2",
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"dcmjs": "^0.29.5",
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"detect-gpu": "^4.0.16",
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"dicom-parser": "^1.8.9",
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@ -1,11 +1,11 @@
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import dcmjs from 'dcmjs';
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import cornerstoneWADOImageLoader from 'cornerstone-wado-image-loader';
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import dicomImageLoader from '@cornerstonejs/dicom-image-loader';
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import FileLoader from './fileLoader';
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const DICOMFileLoader = new (class extends FileLoader {
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fileType = 'application/dicom';
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loadFile(file, imageId) {
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return cornerstoneWADOImageLoader.wadouri.loadFileRequest(imageId);
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return dicomImageLoader.wadouri.loadFileRequest(imageId);
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}
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getDataset(image, imageId) {
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@ -1,4 +1,4 @@
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import cornerstoneWADOImageLoader from 'cornerstone-wado-image-loader';
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import dicomImageLoader from '@cornerstonejs/dicom-image-loader';
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import FileLoader from './fileLoader';
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import PDFFileLoader from './pdfFileLoader';
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@ -15,7 +15,7 @@ class FileLoaderService extends FileLoader {
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}
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addFile(file) {
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return cornerstoneWADOImageLoader.wadouri.fileManager.add(file);
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return dicomImageLoader.wadouri.fileManager.add(file);
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}
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loadFile(file, imageId) {
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@ -1,10 +1,10 @@
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import cornerstoneWADOImageLoader from 'cornerstone-wado-image-loader';
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import dicomImageLoader from '@cornerstonejs/dicom-image-loader';
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import FileLoader from './fileLoader';
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const PDFFileLoader = new (class extends FileLoader {
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fileType = 'application/pdf';
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loadFile(file, imageId) {
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return cornerstoneWADOImageLoader.wadouri.loadFileRequest(imageId);
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return dicomImageLoader.wadouri.loadFileRequest(imageId);
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}
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getDataset(image, imageId) {
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99
yarn.lock
99
yarn.lock
@ -1443,44 +1443,53 @@
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resolved "https://registry.npmjs.org/@cornerstonejs/codec-openjph/-/codec-openjph-2.4.2.tgz#e96721d56f6ec96f7f95c16321d88cc8467d8d81"
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"@cornerstonejs/core@^0.41.0":
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version "0.41.0"
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resolved "https://registry.npmjs.org/@cornerstonejs/core/-/core-0.41.0.tgz#1268bc9cb70e101b52e5eee9055a84541d76ef5d"
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detect-gpu "^4.0.45"
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lodash.clonedeep "4.5.0"
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"@cornerstonejs/core@^0.42.2":
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version "0.42.2"
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version "0.42.3"
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detect-gpu "^4.0.45"
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lodash.clonedeep "4.5.0"
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"@cornerstonejs/core@^0.43.1":
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version "0.43.1"
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detect-gpu "^4.0.45"
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lodash.clonedeep "4.5.0"
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"@cornerstonejs/streaming-image-volume-loader@^0.16.2":
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version "0.16.2"
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resolved "https://registry.npmjs.org/@cornerstonejs/streaming-image-volume-loader/-/streaming-image-volume-loader-0.16.2.tgz#7ac513a21d4d8045047a7aa2fb57b5a85682c036"
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dependencies:
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"@cornerstonejs/core" "^0.41.0"
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"@babel/eslint-parser" "^7.19.1"
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"@cornerstonejs/codec-charls" "^1.2.3"
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"@cornerstonejs/codec-libjpeg-turbo-8bit" "^1.2.2"
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"@cornerstonejs/codec-openjpeg" "^1.2.2"
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"@cornerstonejs/codec-openjph" "^2.4.2"
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"@cornerstonejs/core" "^0.44.0"
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coverage-istanbul-loader "^3.0.5"
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date-format "^4.0.14"
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dicom-parser "^1.8.9"
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pako "^2.0.4"
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uuid "^9.0.0"
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"@cornerstonejs/streaming-image-volume-loader@^0.18.0":
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version "0.18.0"
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dependencies:
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"@cornerstonejs/core" "^0.44.0"
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cornerstone-wado-image-loader "^4.10.2"
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"@cornerstonejs/tools@^0.63.2":
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version "0.63.3"
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resolved "https://registry.npmjs.org/@cornerstonejs/tools/-/tools-0.63.3.tgz#a66df8e8a3dc0c1bd5224d85db5d2231ab946f12"
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"@cornerstonejs/tools@^0.65.0":
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version "0.65.0"
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resolved "https://registry.npmjs.org/@cornerstonejs/tools/-/tools-0.65.0.tgz#419800eed71d5c16809b393d5327dfb96b074a32"
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dependencies:
|
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"@cornerstonejs/core" "^0.44.0"
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lodash.clonedeep "4.5.0"
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lodash.get "^4.4.2"
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@ -8560,22 +8569,6 @@ cornerstone-wado-image-loader@^4.10.2:
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pako "^2.0.4"
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uuid "^9.0.0"
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cornerstone-wado-image-loader@^4.13.0:
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version "4.13.0"
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resolved "https://registry.npmjs.org/cornerstone-wado-image-loader/-/cornerstone-wado-image-loader-4.13.0.tgz#277173973b1d5ec90a2d10557df1f667065953da"
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dependencies:
|
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"@babel/eslint-parser" "^7.19.1"
|
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"@cornerstonejs/codec-charls" "^1.2.3"
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"@cornerstonejs/codec-libjpeg-turbo-8bit" "^1.2.2"
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"@cornerstonejs/codec-openjpeg" "^1.2.2"
|
||||
"@cornerstonejs/codec-openjph" "^2.4.2"
|
||||
coverage-istanbul-loader "^3.0.5"
|
||||
date-format "^4.0.14"
|
||||
dicom-parser "^1.8.9"
|
||||
pako "^2.0.4"
|
||||
uuid "^9.0.0"
|
||||
|
||||
cosmiconfig@^5.0.0, cosmiconfig@^5.1.0, cosmiconfig@^5.2.1:
|
||||
version "5.2.1"
|
||||
resolved "https://registry.npmjs.org/cosmiconfig/-/cosmiconfig-5.2.1.tgz#040f726809c591e77a17c0a3626ca45b4f168b1a"
|
||||
@ -17927,27 +17920,9 @@ postcss@^7.0.0, postcss@^7.0.1, postcss@^7.0.14, postcss@^7.0.26, postcss@^7.0.2
|
||||
picocolors "^0.2.1"
|
||||
source-map "^0.6.1"
|
||||
|
||||
postcss@^8.2.15, postcss@^8.3.11, postcss@^8.3.5:
|
||||
version "8.4.14"
|
||||
resolved "https://registry.yarnpkg.com/postcss/-/postcss-8.4.14.tgz#ee9274d5622b4858c1007a74d76e42e56fd21caf"
|
||||
integrity sha512-E398TUmfAYFPBSdzgeieK2Y1+1cpdxJx8yXbK/m57nRhKSmk1GB2tO4lbLBtlkfPQTDKfe4Xqv1ASWPpayPEig==
|
||||
dependencies:
|
||||
nanoid "^3.3.4"
|
||||
picocolors "^1.0.0"
|
||||
source-map-js "^1.0.2"
|
||||
|
||||
postcss@^8.4.14:
|
||||
version "8.4.16"
|
||||
resolved "https://registry.yarnpkg.com/postcss/-/postcss-8.4.16.tgz#33a1d675fac39941f5f445db0de4db2b6e01d43c"
|
||||
integrity sha512-ipHE1XBvKzm5xI7hiHCZJCSugxvsdq2mPnsq5+UF+VHCjiBvtDrlxJfMBToWaP9D5XlgNmcFGqoHmUn0EYEaRQ==
|
||||
dependencies:
|
||||
nanoid "^3.3.4"
|
||||
picocolors "^1.0.0"
|
||||
source-map-js "^1.0.2"
|
||||
|
||||
postcss@^8.4.17, postcss@^8.4.18, postcss@^8.4.19:
|
||||
postcss@^8.2.15, postcss@^8.3.11, postcss@^8.3.5, postcss@^8.4.14, postcss@^8.4.17, postcss@^8.4.18, postcss@^8.4.19:
|
||||
version "8.4.21"
|
||||
resolved "https://registry.yarnpkg.com/postcss/-/postcss-8.4.21.tgz#c639b719a57efc3187b13a1d765675485f4134f4"
|
||||
resolved "https://registry.npmjs.org/postcss/-/postcss-8.4.21.tgz#c639b719a57efc3187b13a1d765675485f4134f4"
|
||||
integrity sha512-tP7u/Sn/dVxK2NnruI4H9BG+x+Wxz6oeZ1cJ8P6G/PZY0IKk4k/63TDsQf2kQq3+qoJeLm2kIBUNlZe3zgb4Zg==
|
||||
dependencies:
|
||||
nanoid "^3.3.4"
|
||||
@ -21056,7 +21031,7 @@ table@^6.0.9:
|
||||
|
||||
tailwindcss@3.2.4:
|
||||
version "3.2.4"
|
||||
resolved "https://registry.yarnpkg.com/tailwindcss/-/tailwindcss-3.2.4.tgz#afe3477e7a19f3ceafb48e4b083e292ce0dc0250"
|
||||
resolved "https://registry.npmjs.org/tailwindcss/-/tailwindcss-3.2.4.tgz#afe3477e7a19f3ceafb48e4b083e292ce0dc0250"
|
||||
integrity sha512-AhwtHCKMtR71JgeYDaswmZXhPcW9iuI9Sp2LvZPo9upDZ7231ZJ7eA9RaURbhpXGVlrjX4cFNlB4ieTetEb7hQ==
|
||||
dependencies:
|
||||
arg "^5.0.2"
|
||||
|
||||
Loading…
Reference in New Issue
Block a user