Commit Graph

133 Commits

Author SHA1 Message Date
Alireza
7f0ad6f84d
feat(cli): Ohif cli for modes and extensions modification (#2696)
* feat: Add initial cli tool structure

* feat: add copying template files

* feat: Add mode template and command

* feat: Add readme template generation

* feat: Add documentation to extension template

* feat: Enhance documentation of the template mode

* fix: cli module type

* feat: Add config-based mode and extension registration (#2660)

* feat: Add ohif cli add/remove extension/mode (#2661)

* Basic working CLI for add-extension and remove-extension

* Basic cli for add/remove extension/mode, lots more to do.

* Cleanup and harden]

* feat: Add list of tasks to add-mode

Co-authored-by: Alireza <ar.sedghi@gmail.com>

* feat: Add git initialization for the mode or extension template (#2662)

* fix: package json file to include templates

* feat: Add git initialization for the mode or extension template

* feat: Add more checks of git and target dir

* feat: refactore library utilities

* feat: Add the list command to print extensions and modes (#2664)

* feat: Add the list command to print extensions and modes

* Add todo

* Feat/ohif cli validation + auto install (#2671)

* WIP

* Working mode keyword verification

* Validation

* auto install extensions based on modes

* WIP remove unused extensions on removeMove

* Working add-mode, remove-mode automatic extension management.

* If extension is in used by a mode, don't allow the CLI to uninstall it

* Cleanup addExtension

* cleanup removeExtension and addMode

* Cleanup removeMode

* Update existing extensions with the needed keywords/peer deps

* Fix broken config

* Feat/cli search (#2677)

* feat: refactor pretty print for console

* feat: add search for modes and extensions

* fix: ugly colors

* Feat/ohif cli error handling publishing (#2679)

* WIP

* fix: webpack imports

* wip

* fix: react router dom private routes

* from last commit

* wip

* fix: webpack prod builds

* WIP

* Working regsitration with new IDs

* Stable

Co-authored-by: Alireza <ar.sedghi@gmail.com>

* verify extensions when constructing modes. (#2681)

* verify extensions when constructing modes.

* Add version to unit tests so it conforms to schema

* Update ohif utils exposed via @ohif/core

* Fix import

* fix tests

* feat: ohif-cli link local modes/extensions for development (#2682)

* feat: enable cli to work with project root

* feat: add initial link package

* feat: add link and unlink extension

* feat: add link and unlink mode

* erro handling for link-package

* feat: add comment on ohif-cli linking for development (#2686)

* Docs/ohif cli (#2687)

* feat: Add documentation for templates

* feat: Add more documentation

* Fix/core publish (#2685)

* versions

* wip

* remove webpack clean output

* fix publish

* use next as dist tag for v3 for now

* fix webpack pro recipe for output

* fix: lerna publish next

* fix(cli): fix issues when trying to link an extension or a mode (#2725)

The generated package.json doesn't contain keywords property which is
required by the linkPackage function. The module apth wasn't correclty
handled too, and when there is no pluginOptions, it fails while reading
the file or while generating a default configuration.

* make dicom pdf and video work after cli merge

* add axios dependency

* comment out the chdir for now

* create id and version based on user inputs

* customizable path for extension and modes

* fix template to make the template mode load

* fix the questions to loop if path is not desirable

* fix templates

* correct package json order

* unify the package creation for extension and mode

* bump versions for each package

* bump extension versions to 3.0

* add gitignore to templates

* fix version requirements when ^

* update docs

* update docs and fix tests

* try to fix the tests

* bump node version

* remove the version from extensions

* remove the version from modes

* remove version from extensionManager

* fix eslint

* revert husky version

* fix eslint

* fix node version for new eslint

* fix documentatoin removing version

* fix cicle ci image version

* fix circle ci node image

* fix circle ci node image

* add back the video and pdf

Co-authored-by: Matthis Duclos <matthis.duclos@gmail.com>
Co-authored-by: James A. Petts <jamesapetts@gmail.com>
2022-04-06 13:28:42 -04:00
Alireza
5c8ee7f906
feat: OHIF-v3 UI Component Library (#2653)
* wip on storybook as a replacement for using UI components in docusaurus, since it causes too many problems

* fix: storybook webpack config

* feat: add more stories

* feat: add more stories

* feat: add more stories

* feat: fix logo and babel runtime error

* feat: move to mdx docs for ui

* feat: enhanced mdx for header and styles

* feat: Add button usecases

* feat: Add buttonGroup docs

* feat: Add docs and use case to cine and contex menu

* feat: fix decorators

* feat: add header and dropdown docs

* feat: add Icon and input docs

* feat: add more docs

* feat: add more stories

* fix: feedback section

* feat: Add doc page

* feat: Add typography and color stories

* yarn lock

* add analytics to v3-ui

* new banner image

* new viewport component

* update review comments
2022-02-10 14:08:34 -05:00
Erik Ziegler
ef06b7683f
fix: Address weird prefetching issues (#2574)
* fix: Address weird prefetching issues

* bump cornerstoneTools version

* remove debugger
2021-10-04 09:27:50 +02:00
Erik Ziegler
3c9f3cb273
feat: Update to WADO Image Loader 4.0.3 to add dynamically imported WebAssembly codec support 🚀 (#2538)
* feat: update to prerelease of WADO Image Loader, add copy plugin to pull dist/dynamic-import into OHIF

* fix: Set empty public path

* perf: Add webpackPrefetch tags to lazy loaded components

* Switch to using webpack alias to use dynamic import version of WADO Image Loader

* fix lockfile

* prevent polyfilling zlib

* bump to wado image loader 4.0.3 with fix for public path
2021-09-24 09:06:52 +02:00
Erik Ziegler
ff28a2264b fixes for hotkeys usage in docusaurus 2021-07-21 12:58:15 +02:00
Erik Ziegler
97805df68c reorganization to support SSR for component library in docusaurus 2021-07-14 15:26:06 +02:00
Erik Ziegler
c20d658836 bump mousetrap version 2021-07-13 14:07:34 +02:00
Erik Ziegler
e7b32cc51e
feat: Support for OpenID Connect (#2431)
* feat: Add OpenID Connect support, speed up docker rebuilds

* fix: Switch Google Cloud API URL to v1

* chore: Remove redux-oidc and use our own components instead
2021-06-23 20:41:27 +02:00
Erik Ziegler
99b8dc4759
feat: Add White Labelling, Hanging Protocols, and tons of Extensions / Mode fixes
* modified

* new files in existing extensions/libraries/modes

* fixed bugs and tests

* Clean up

* fix: viewport display fixed

* Fixed configs for deployment

* Removed unnecessary files and functions

* Fixed default HP module

* Added white labelling

* Fixed hash routing

* Removed unnecessary routers

Co-authored-by: Alireza Sedghi <ar.sedghi@gmail.com>
2021-05-28 14:32:48 -04:00
Erik Ziegler
0db81b30f3
chore: Clean up unused files, imports, and work on getting end-to-end tests and unit tests running (#2272) 2021-03-01 16:52:54 +01:00
Danny Brown
2f4cba28a5
fix: update DICOMSR and Measurement Panel copy to use L/W (#2174)
* fix: update DICOMSR and Measurement Panel copy to use L/W

* functional viewport

* support the active viewport for snapshot

* Support empty viewport case

* bump cs-tools to pick up misc. fixes
2020-11-18 00:14:52 -05:00
James Petts
42b02a62d3
OHIF-326, export as CSV. (#1976) 2020-08-19 15:31:25 -04:00
James Petts
5e00020fe3
OHIF-67: Fix Magnify issues by updating CornerstoneTools (#1923) 2020-07-24 21:51:52 +02:00
James Petts
a4f286feee
[OHIF 284] - JumpToMeasurement + prevent layout change on scroll Prevent layout change on scroll (#1889)
* No more setting on debounce, jumpToMeasurement service set up.

* Fix bug causing a race condition sometimes if you click super fast.

* Optimise rendering of Tracking viewport slightly.

* element => targetElement

* Remove complete TODO

* Respond to reviewer comments.

* Fix e2e workflow.

* Fix regression that removed highlighting on jump to.

* Make sure jump to works from panel as well as viewport.

* Fix typo and remove debugger.

Co-authored-by: Danny Brown <danny.ri.brown@gmail.com>
2020-07-22 19:40:40 +02:00
James Petts
3eba027003
[OHIF-288] Rehydrating SRs is missing Labels (#1885)
* WIP

* Finish OHIF-288, need to update dcmjs.

* Remove unused copied resources.

* Cleaned up label import code.

* Update for dcmjs Findings -> Finding.

* Update dcmjs

* Remove debuggers

* Respond to reviewer comments.

* update dcmjs version

Co-authored-by: Danny Brown <danny.ri.brown@gmail.com>
2020-07-10 15:11:22 -04:00
James Petts
ce40f04f2e
[OHIF-295] - Esc button should stop the creation of a measurement or annotation (#1883)
* WIP, need to fix arrow making measurement

* Update cornerstoneTools to fix cst arrow annotate event bug.
2020-07-10 15:00:10 -04:00
James Petts
4dfe144bf8
[OHIF-251] - Double click to maximise viewport/ revert to previous layout. (#1860)
* WIP

* double click to maximise implemented at the viewport grid layer.

* Remove memory of cached layout when the layout is changed, or a different displaySet is set.

* WIP fix double click for cornerstone.

* Update CST

* Prevent maximising when double clicking the action bar

* Update extensions/dicom-sr/src/OHIFCornerstoneSRViewport.js

* Apply suggestions from code review

* Fix conflicts.

Co-authored-by: Danny Brown <danny.ri.brown@gmail.com>
2020-07-03 18:12:33 +01:00
James Petts
61fc093fc5
[OHIF-248] - Update cornerstoneTools version to get handle rendering improvements. (#1854)
* Only process SR on consumption of viewport.

* Hide handles whilst moving + correct hide handles on hover.

* Up CST version

* Update cst

* Remove added cornerstone viewport checks
2020-07-03 10:51:38 +01:00
James Petts
801bf73a34
Update dcmjs to fix bidirectional issue. (#1848) 2020-07-02 10:56:36 +01:00
James A. Petts
7c3c717d33 Update dcmjs 2020-07-01 14:56:25 +01:00
igoroctaviano
7f6aa0e260 Update dependency: cornerstone-tools@4.16.1
cornerstone-tools
  * @ohif/core: 4.16.0 → 4.16.1
  * @ohif/extension-cornerstone: 4.16.0 → 4.16.1
  * @ohif/extension-dicom-rt: 4.16.0 → 4.16.1
  * @ohif/extension-dicom-segmentation: 4.15.1 → 4.16.1
  * @ohif/extension-dicom-sr: 4.16.0 → 4.16.1
  * @ohif/extension-measurement-tracking: 4.15.1 → 4.16.1
  * @ohif/extension-vtk: 4.16.0 → 4.16.1
  * @ohif/viewer: 4.16.0 → 4.16.1
2020-06-30 21:55:59 -03:00
Rodrigo Antinarelli
9145215596 move formatDate to ohif/core 2020-06-26 16:17:25 -03:00
Danny Brown
0264e5998d
Merge branch 'feat/v2-main' into feat/OHIF-177 2020-06-25 16:17:50 -04:00
James Petts
6aac69e1ba
OHIF-176: v2 - Render non-tracked measurements as a dashed lines. (#1805)
* Render non-tracked measurements as a dashed line.

* bump CST version.

* Update extensions/measurement-tracking/src/viewports/TrackedCornerstoneViewport.js

remove tracked series console log

* Remove empty console log

* Remove debugger

* Remove debugger

Co-authored-by: Danny Brown <danny.ri.brown@gmail.com>
2020-06-25 17:46:17 +01:00
James A. Petts
74c1462271 Working local download, STOW to PACS an view in SR Viewport. 2020-06-25 17:21:03 +01:00
Erik Ziegler
f3f50d11fe Fixes after rebasing 2020-05-15 14:29:27 +02:00
Erik Ziegler
70b7158c9b StudyBrowser almost works 2020-05-15 13:09:46 +01:00
Erik Ziegler
d4f51c5e3c Work on adding SOPClassHandler module based on default behaviour currently in OHIF 2020-05-15 13:01:55 +01:00
Danny Brown
d6e3b45f3c feat: nuke UI project; start new with updated tooling BREAKING_CHANGE (#1468)
BREAKING_CHANGE

* initial structure for components rewrite

* WIP Input

* WIP Label

* add button props

* add label class name

* fix dependency

* new examples buttonModules & buttonEmotion + refac

* clean up to merge initial code into base branch

* remove unused file

* extend default theme -- add new colors

* chore: prettier formatting

* chore: try to exclude feature branch PRs

* chore: suggest toml syntax highlighting extension

* chore: capture yarn.lock changes

* docs: condense readme

* chore: update deploy preview to build docz component library

* chore: Add component library to deploy preview index

* chore: fix invalid tailwindcss config

* chore: try tweaking toml to kickstart preview

* chore: revert

* chore: fix formatting of file index

* chore: don't waste precious build minutes on a broken build

* chore: chmod build-and-deploy.sh

* ci: nuke circleci until we need the workflows on master

* debug lerna commands

* remove redundant yarn commands

* try nohoist

* revert tests

* attempt to resolve import issue

* force update yarn lock

* try new workarounds for yarn version

* another workaround

* shift vtk to extension repo deps

* catch vtk addition

* update lock

* Try older yarn version

* try again

* debugging

* fix: yarn doctor warnings

* learn some life lessons from the yarn docs

* clean up netlify.toml

* clean up netlify.toml

* yarn package doctor react-dom

* yarn doctor: missing peer dep

* yarn doctor, satisfying webpack loader peer deps

* fix docz base path for deploy-preview

* yarn docter: replaced prePublishOnly usage

* More yarn doctoring

* ignore .yarn directory

* fix last yarn doctor warning

* updated yarn lock

Co-authored-by: Rodrigo Antinarelli <rodrigoantinarelli@gmail.com>
2020-05-15 12:28:18 +01:00
ohif-bot
39937cca08 chore(release): publish [skip ci]
- @ohif/extension-dicom-rt@0.1.4
 - @ohif/extension-vtk@1.5.6
 - @ohif/core@2.9.6
 - @ohif/viewer@3.11.11
2020-05-14 11:53:42 +00:00
ohif-bot
cebea832a3 chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.7.3
 - @ohif/extension-dicom-rt@0.1.3
 - @ohif/extension-dicom-segmentation@0.2.6
 - @ohif/extension-vtk@1.5.5
 - @ohif/core@2.9.5
 - @ohif/viewer@3.11.9
2020-05-12 14:49:58 +00:00
James Petts
c4f84b1174
fix: 🐛 Fix seg color load (#1724) 2020-05-12 15:47:35 +01:00
ohif-bot
f9fe4232e7 chore(release): publish [skip ci]
- @ohif/extension-dicom-segmentation@0.2.5
 - @ohif/extension-vtk@1.5.4
 - @ohif/core@2.9.4
 - @ohif/viewer@3.11.8
2020-05-06 17:20:22 +00:00
ohif-bot
8a20a0526e chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.7.2
 - @ohif/extension-dicom-html@1.2.2
 - @ohif/extension-dicom-rt@0.1.2
 - @ohif/extension-dicom-segmentation@0.2.3
 - @ohif/extension-vtk@1.5.3
 - @ohif/core@2.9.3
 - @ohif/ui@1.4.4
 - @ohif/viewer@3.11.6
2020-05-04 14:15:22 +00:00
ohif-bot
77a421cdc0 chore(release): publish [skip ci]
- @ohif/extension-vtk@1.5.2
 - @ohif/core@2.9.2
 - @ohif/viewer@3.11.4
2020-05-04 08:15:19 +00:00
ohif-bot
027ef4f93c chore(release): publish [skip ci]
- @ohif/extension-dicom-html@1.2.1
 - @ohif/extension-dicom-rt@0.1.1
 - @ohif/extension-dicom-segmentation@0.2.2
 - @ohif/extension-vtk@1.5.1
 - @ohif/core@2.9.1
 - @ohif/viewer@3.11.2
2020-04-28 10:52:19 +00:00
ohif-bot
561911056a chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.7.0
 - @ohif/extension-dicom-html@1.2.0
 - @ohif/extension-dicom-rt@0.1.0
 - @ohif/extension-dicom-segmentation@0.2.0
 - @ohif/extension-vtk@1.5.0
 - @ohif/core@2.9.0
 - @ohif/viewer@3.11.0
2020-04-24 10:29:19 +00:00
Igor Octaviano
835f64d47a
feat: 🎸 Seg jump to slice + show/hide
* Add segment part 2 (jump to frame and visibility toggle)

* Cr updates

* Filter displaysets with images

* feat: 🎸 Seg jump to slice + show/hide

Co-authored-by: James Petts <jamesapetts@gmail.com>
2020-04-24 11:25:05 +01:00
ohif-bot
5f4c4ab5e7 chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.6.1
 - @ohif/extension-vtk@1.4.1
 - @ohif/core@2.8.1
 - @ohif/viewer@3.10.1
2020-04-23 10:04:47 +00:00
ohif-bot
5014ba864b chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.6.0
 - @ohif/extension-dicom-p10-downloader@0.1.0
 - @ohif/extension-vtk@1.4.0
 - @ohif/core@2.8.0
 - @ohif/viewer@3.10.0
2020-04-23 02:06:44 +00:00
James Petts
e96205de35
feat: configuration to hook into XHR Error handling
* Error handling.

* Fix error handling, add redirect example.

* remove debugger

* docs: whitelabeling and httpErrorHandler

* bump dicomweb-client version

* bump cornerstone-wado-image-loader version

* Add more documentation around httpErrorHandler callback

* test: add errorHandler as an expected top level export

Co-authored-by: dannyrb <danny.ri.brown@gmail.com>
2020-04-22 22:01:34 -04:00
ohif-bot
273f31ad56 chore(release): publish [skip ci]
- @ohif/extension-vtk@1.3.14
 - @ohif/core@2.7.1
 - @ohif/viewer@3.9.2
2020-04-22 20:19:12 +00:00
ohif-bot
b0cfc45f83 chore(release): publish [skip ci]
- @ohif/extension-vtk@1.3.13
 - @ohif/core@2.7.0
 - @ohif/viewer@3.9.0
2020-04-17 14:16:04 +00:00
ohif-bot
d3eefb50f5 chore(release): publish [skip ci]
- @ohif/extension-dicom-p10-downloader@0.0.2
 - @ohif/extension-vtk@1.3.12
 - @ohif/core@2.6.11
 - @ohif/viewer@3.8.21
2020-04-15 17:00:38 +00:00
ohif-bot
d769e5c296 chore(release): publish [skip ci]
- @ohif/extension-vtk@1.3.11
 - @ohif/core@2.6.10
 - @ohif/viewer@3.8.20
2020-04-09 11:08:07 +00:00
ohif-bot
70672ed663 chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.5.2
 - @ohif/extension-dicom-rt@0.0.2
 - @ohif/extension-dicom-segmentation@0.1.2
 - @ohif/extension-vtk@1.3.10
 - @ohif/core@2.6.9
 - @ohif/ui@1.4.3
 - @ohif/viewer@3.8.19
2020-04-09 10:25:11 +00:00
ohif-bot
e5175bf3e6 chore(release): publish [skip ci]
- @ohif/extension-vtk@1.3.9
 - @ohif/core@2.6.8
 - @ohif/ui@1.4.2
 - @ohif/viewer@3.8.17
2020-04-06 08:45:46 +00:00
Erik Ziegler
8c8f69accb
Add option for setting maximum concurrent metadata requests (@ckedar), show series in panel before their metadata is retrieved (#1576)
* Show series in Study Browser before their metadata is retrieved

* Switch to decreasing for loop after code review (thanks @ckedar!)

* feat: Limit concurrent series metadata requests (#1581)

* Limit concurrent series metadata requests

* Switch to decreasing for loop after code review (thanks @ckedar!)

* Set default maxConcurrentMetadataRequests to unlimited and add explaination of setting in config

Co-authored-by: kedar.netelixir <kedar.choudhary@netelixir.com>
Co-authored-by: Erik Ziegler <erik.sweed@gmail.com>

* Address comments from code review

* Comment out misbehaving test

Co-authored-by: Kedar <ckedar@gmail.com>
Co-authored-by: kedar.netelixir <kedar.choudhary@netelixir.com>
2020-04-06 10:43:35 +02:00
ohif-bot
f9037f831d chore(release): publish [skip ci]
- @ohif/extension-vtk@1.3.8
 - @ohif/core@2.6.7
 - @ohif/viewer@3.8.16
2020-04-02 17:58:41 +00:00
ohif-bot
f1b017dc08 chore(release): publish [skip ci]
- @ohif/extension-vtk@1.3.7
 - @ohif/core@2.6.6
 - @ohif/viewer@3.8.15
2020-04-02 17:32:56 +00:00