Commit Graph

210 Commits

Author SHA1 Message Date
Ibrahim
430330f7e3
fix(hydration): Maintain the same slice that the user was on pre hydration in post hydration for SR and SEG. (#4200) 2024-06-05 10:07:53 -04:00
Ibrahim
18686c2caf
feat(measurements): show untracked measurements in measurement panel under additional findings (#4160) 2024-05-29 09:12:39 -04:00
Alireza
70f2c797f4
feat(ui): move to React 18 and base for using shadcn/ui (#4174)
Co-authored-by: IbrahimCSAE <ibrahim.mdev@gmail.com>
2024-05-27 14:30:25 -04:00
Ibrahim
374065bc3b
feat(typings): Enhance typing support with withAppTypes and custom services throughout OHIF (#4090) 2024-05-08 12:12:49 -04:00
Ibrahim
730f434910
fix(bugs): enhancements and bugs in several areas (#4086) 2024-05-06 14:55:32 -04:00
Alireza
d250d04580
fix(layouts): and fix thumbnail in touch and update migration guide for 3.8 release (#4052) 2024-04-18 23:21:02 -04:00
Alireza
f99a0bfb31
fix(viewport): Reset viewport state and fix CINE looping, thumbnail resolution, and dynamic tool settings (#4037) 2024-04-16 11:04:48 -04:00
Ibrahim
e80fc6f477
fix(bugs): enhancements and bug fixes (#4036) 2024-04-16 09:01:06 -04:00
Ibrahim
2b83393f91
fix(general): enhancements and bug fixes (#4018) 2024-04-10 11:34:13 -04:00
Leonardo Campos
d57e8bc157
feat(4D): Add 4D dynamic volume rendering and new pre-clinical 4d pt/ct mode (#3664)
Co-authored-by: Alireza <ar.sedghi@gmail.com>
Co-authored-by: Neil <neil.a.macphee@gmail.com>
2024-04-09 23:57:34 -04:00
Igor Octaviano
5645ac1b27
fix(cornerstone-dicom-sr): Freehand SR hydration support (#3996)
Co-authored-by: Ibrahim <93064150+IbrahimCSAE@users.noreply.github.com>
Co-authored-by: IbrahimCSAE <ibrahim.mdev@gmail.com>
2024-04-05 05:42:43 -04:00
nithin-trenser
56b1eae635
feat(measurement): Add support measurement label autocompletion (#3855) 2024-04-04 22:42:48 -04:00
Ibrahim
b7f90e3951
feat(ViewportActionMenu): window level per viewport / new patient info / colorbars/ 3D presets and 3D volume rendering (#3963)
Co-authored-by: Joe Boccanfuso <109477394+jbocce@users.noreply.github.com>
2024-04-02 09:35:30 -04:00
Alireza
566b25a544
feat(toolbar): new Toolbar to enable reactive state synchronization (#3983) 2024-03-27 16:01:32 -04:00
Igor Octaviano
0049f4c030
feat(hp): enable OHIF to run with partial metadata for large studies at the cost of less effective hanging protocol (#3804)
Co-authored-by: rodrigobasilio2022 <rodrigo.basilio@radicalimaging.com>
Co-authored-by: rodrigobasilio2022 <114958722+rodrigobasilio2022@users.noreply.github.com>
2024-01-09 14:22:00 -05:00
Pedro H. Köhler
2049c0936c
feat: improve disableEditing flag (#3875)
Co-authored-by: Igor Octaviano <igoroctaviano@gmail.com>
2024-01-08 13:45:24 -05:00
Pavel
d14a8f0199
feat(i18n): enhanced i18n support (#3761) 2023-12-11 09:43:58 -05:00
Joe Boccanfuso
b23eeff937
fix(thumbnail): Avoid multiple promise creations for thumbnails (#3756) 2023-11-02 12:07:52 -04:00
Joe Boccanfuso
85c899b399
feat(SidePanel): new side panel tab look-and-feel (#3657) 2023-09-22 15:36:44 -04:00
Alireza
48bbd6281a
feat(segmentation mode): Add create, and export SEG with Brushes (#3632) 2023-09-22 10:23:44 -04:00
Alireza
9045ddaedc
chore(prettier): full repo linting and code reformatting once and for all (#3627) 2023-09-01 16:19:39 -04:00
Alireza
4c6ff873e8
feat(grid): remove viewportIndex and only rely on viewportId (#3591)
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2023-08-30 16:46:55 -04:00
Joe Boccanfuso
a336992971
feat(cloud data source config): GUI and API for configuring a cloud data source with Google cloud healthcare implementation (#3589) 2023-08-25 14:19:17 -04:00
Joe Boccanfuso
0f9b36906f
feat(thumbnail highlight): Thumbnails of hydrated series are now highlighted (#3594) 2023-08-16 12:51:26 -04:00
rodrigobasilio2022
f845f87716
feat(handler): Add handler for unsupported sopclassUIDs (#3601) 2023-08-16 11:37:28 -04:00
rodrigobasilio2022
3c4795d8cb
feat(read-only config): read only ui for SEG/RT/SR (#3586) 2023-08-16 10:26:28 -04:00
rodrigobasilio2022
19408c987f
feat(errorHandling): Create fallback page for Server, Study and Series (#3592) 2023-08-15 22:59:29 -04:00
Bill Wallace
884577a23d
fix: Integration test instability (#3597)
There are a couple of changes here which should improve stability of the tests.  Hopefully that will be sufficient, but it is difficult to tell for sure if it is complete.
2023-08-15 07:20:45 -04:00
rodrigobasilio2022
5302e5b62b
feat(Thumbnail): Display set messages support & displaying of series inconsistencies in the thumbnail (#3499)
Co-authored-by: Igor Octaviano <igoroctaviano@gmail.com>
2023-08-11 19:16:25 -03:00
Alireza
5d435424e2
lint(curly): consistent use of curly brackets in codebase (#3584) 2023-08-09 10:07:33 -04:00
Joe Boccanfuso
c3cd265430
fix(Measurement tracking): Side panel study browser can now be closed and measurements are still tracked (#3530) 2023-07-12 08:28:48 -04:00
Joe Boccanfuso
15ad8f29cd
fix(date formatting): Show study date as a fallback for an empty series date and show 'No Study Date' as a back up for both (#3483) 2023-06-29 10:43:56 -04:00
dxlin
d51211f6b9
fix(SR export): prevent empty sr description when export (#3173) 2023-06-19 10:35:53 -04:00
Joe Boccanfuso
cc73f15c8c
fix(Button): redesign of existing Button component for consistency (#3473) 2023-06-15 12:58:21 -04:00
Joe Boccanfuso
da5c32bce3
fix(modal and dialogues): fixes as per specifications (#3438)
Co-authored-by: Alireza <ar.sedghi@gmail.com>
2023-06-07 08:31:09 -04:00
Alireza
c7bcf1134d
fix(staticwado): SM and RT and update the server with new data (#3422)
* fix bugs for the RT for the new demo

* fix SM with the static-wado server

* remove thumbnail from tmtv

* migration guide

* fix stability for the rt struct

* apply review comments

* add loading indicator to SM

* pdf works

* try to fix relative bulkData

* fix the rest

* fix preflight for the SM

* fix typo

* apply review comments

* yarn lock
2023-05-29 09:04:49 -04:00
Joe Boccanfuso
685520acab
feat(command): Added command and hotkey binding for navigate to next and previous display set. (#3409)
* fix(command): Added command and hotkey binding for navigate to next and previous display set.

* Centralized the sorting (function) of display sets since at least three
areas sort display sets: hanging protocols, study/thumbnail browser and
updateViewportDisplaySet command.

* Renamed some methods for clarity.

* Scrolling active thumbnail into view for an updateViewportDisplaySet

* Added a null check.

* Added check to minimize thumbnail scrolling.
2023-05-23 15:03:55 -04:00
Joe Boccanfuso
c0fd4416ed
fix(Measurement): fixed line dashing of measurements in various scenarios (#3407)
* fix(Measurement): fixed line dashing of measurements in various scenarios

For a StackViewport simply rely on the SeriesInstanceUID being part of the
tracked measurements or not.

For a VolumeViewport first check the image id of the current image in the viewport
and then check the SeriesInstanceUID (like for a StackViewport) if an id is returned.
To reliably get the id of the current image, listen for the VOLUME_VIEWPORT_NEW_VOLUME event.

* Changes for PR comments.
2023-05-18 20:59:33 -04:00
Joe Boccanfuso
045e54aa02
fix(Measurement): Use dashed lines for measurments of viewports where getCurrentImageId returns undefined (#3392)
* fix(Measurement): Use dashed lines for measurments of viewports where getCurrentImageId returns undefined

* Updated cornerstone3d packages

* Fixed code comment.

* Removed unused imports.
2023-05-16 10:02:10 -04:00
Bill Wallace
d5c5951e57
fix(SR): KO series being displayed in browser list (#3382)
* fix: KO series being displayed in browser list

* fix sr for volume viewports

* move highlight labelmap to RAF

* remove commented code

* fix the hydration bug for the SR

* apply review comments

* revert the key images for sr

* Remove some obsolete changes

* set initial image for sr instead of jump

* Remove viewportType stack

---------

Co-authored-by: Alireza <ar.sedghi@gmail.com>
2023-05-15 08:23:13 -04:00
Alireza
84cb709b44
feat(panel and auth): fix study panel to not rely on priors and add token param to url (#3381)
* fix: multiframe

* fix the unnecessary use of prior since some servers dont like it

* add authentication via token in url

* add data citation

* add resources

* upgrade packages

* yarn lock

* apply review comments
2023-05-11 10:01:33 -04:00
Joe Boccanfuso
8eaa1877fd
fix(DICOM PDF and Video): fixes for local DICOM load and remote data sources (#3374)
* fix(DICOM PDF and Video)
- added retrieve.directURL for local DICOM load data source; it returns a data URL
- fixed various checks for video using transfer syntaxes and SOP class UID with number of frames
- added call to 'rendered' endpoint for those data sources that support it; others get BulkDataURI

* Added DOC (PDF) and OT (for video in particular) to list of non-image thumbnail modalities.

* Fixed broken e2e tests.
2023-05-10 12:42:48 -04:00
Bill Wallace
b5b936b53e
fix(jump): Jump to measurement wasn't jumping when presentation already existed (#3318)
* fix: Jump to measurement after presentation store

* Fix initial load of DICOM SR

* Fix measurement highlight issues

* Clear measurements changed to array

* Fix merge issues

* PR comments

* Removed unused formatting.  Change to single event

* Fix the unit test

* PR review comments

* refactor(viewport): simplify imports, align destructuring

Simplify import statements by removing unused imports, organize existing imports, and align destructured imports consistently across the component.

---------
2023-05-01 12:54:33 -04:00
Alireza
f377153b60
fix(viewportDialog): viewportDialoge not appearing in non-tracked viewports (#3071)
* fix: viewportdialoge not appearing in non-tracked viewports

* feat(viewports): Introduce useViewportDialog and remove deprecated API

This commit introduces the `useViewportDialog` hook and replaces the deprecated `viewportDialogApi` with the new `viewportDialogState`. Additionally, the notifications in `OHIFCornerstoneRTViewport` and `OHIFCornerstoneViewport` have been removed. Finally, the `CinePlayer` component now accepts optional parameters.

* fix tests
2023-04-28 11:06:03 -04:00
M.D
075008c674
feat(microscopy): add dicom microscopy extension and mode (#3247)
* skeleton for dicom-microscopy extension

* skeleton for microscopy mode

* [feat] ported @radicalimaging/microscopy-dicom to OHIF's default extension

* [feat] ported microscopy mode from private repo

* added new definitions to the package.json

* webpack configuration update for microscopy extension

* register new icons for microscopy tools

* fixes to the microscopy extension and mode

* trivial error fix - typescript type import error

* link microscopy extension with default OHIF app plugin config

* demo config fix

* fix logs

* remove unsed imports

* [fix] loading of microscopy

* [fix] webworker script loading, normalizing denaturalized dataset

* found the latest version of dicom-microscopy-viewer that works with current OHIF extension : 0.35.2

* hide thumbnail pane by default, as we have issues with

* comments

* remove unused code

* [feat] microscopy - annotation selection

* [feat] microscopy - edit annotation label

* wip

* [bugfix] dicom-microscopy tool

* [bugfix] dicom microscopy annotations

* [fix] mixed-content blocking caused by BulkDataURI

* [fix] microscopy measurements panel - center button

* [fix] microscopy measurements panel - styling

* [fix] microscopy - controls

* fix local loading of microscopy

* fix local loading of dicom microscopy

* fix typo - indexof to indexOf

* [fix] remove unused icons

* remove commented out lines from webpack configuration

* platform/viewer/public/config/default.js - revert accidental changes

* [refactor] redirecting to microscopy mode on Local mode

* attribution to DMV and SLIM viewer

* [fix] code review feedbacks

* fix thumbnails

* [fix] microscopy - fix old publisher.publish() to PubSubService._broadcastEvent()

* [fix] interactions, webpack config, roi selection

* [feat] microscopy - remove select tool  from UI

* microscopy author

* [fix] saving and loading SR

* [bugfix] - missing publish() function in MicroscopyService, replace with _broadcastEvent

* remove author section from readme

* refactor SR saving feature

* fix webpack config after merge

* [bugfix] repeated import

* fix e2e

* webpack configuration

* hide "Create report" button for microscopy
2023-04-27 20:53:52 -04:00
Joe Boccanfuso
51cb0519fc
fix(Browser history): fixed NPE when navigating a study via browser history and history navigation is now available via the navigateHistory command (#3337)
* fix(Browser history):
- fixed an NPE when navigating to a different study via the URL
- exposed browser history navigation via a command

* Added documentation for the navigateHistory command.
Moved the history object from UI to viewer.
2023-04-27 10:46:23 -04:00
Joe Boccanfuso
d5ff590dfc
feat(DoubleClick): double click a viewport to one up and back (#3285)
* feat(DoubleClick): double click a viewport to one up and back

Added a toggleOneUp command that puts the active viewport into a 1x1 grid layout
and it toggles out of 'one-up' by restoring its saved 'toggleOneUpViewportGridStore'
from the StateSyncService.
Added double click customization for the Cornerstone extension with the
default double click handling being the toggleOneUp command.
Added a cypress test for the double click functionality.

* PR feedback:
- tracked viewport measurements no longer show as dashed when toggling one up
- disallowed double clicking near a measurement
- updated cornerstone3D dependencies to fix double click of TMTV and volume viewport 3D
- created ViewportGridService.getLayoutOptionsFromState

* Updated the ViewportGridService docs.

* Switched to using 'cornerstoneViewportClickCommands' and consistency with the context menu clicks.
2023-03-29 15:39:51 -04:00
Bill Wallace
8e9d7bd2bb
feat(findingSite): Allow customizing the measurement panel and show site/finding (#3155)
* feat: Allow customizing the measurements panel.

Also includes default display of the site/finding values from the DICOM
SR object.

Update fixes

PR review comments - move the recordInteraction to COmmandsManager.run

PR fixes

fix: Dependency updates to allow right click to be recognized

PR fixes

* Use newer CSWIL

* Make both the base measurements and the tracking measurements show codes

* Fix the right click context menu bringing up menu
2023-03-24 16:45:21 -04:00
Braden Morley
3b6822e7b6
fix(ui): autoscroll to new measurement on measurement table (#3223)
Fixed scrolling for measurement clicks

changed import
2023-03-21 21:36:53 -04:00
Bill Wallace
803f638401
feat: state sync service and hanging protocol updates to preserve state (#3131)
* feat: Add state sync and use it to remember viewport grid info

fix: Version updates

Fixes for toggling MPR mode

Fix the display when the interleaved load module fails

Fix the memory of the state to restore correctly

PR fixes for the state sync service

PR fixes

PR fixes

PR fixes

Added a hack warning to remove volumeDeactivate

Fixes for TMTV colormap setting

Fix the casing

Missed renames

fix: tests not running due to variance in ordering

Reverting some fixes to change case

PR changes - mostly comments and minor improvements

fix: All display sets were being updated on drag and drop

PR fixes - mostly renames

PR fixes

Test support for OHIF, for HP branch

test: Add at least a minimal set of automated tests for hanging protocols

Docs

PR fixes

Merge fixes

DOCS updates

Add an example of the mn hanging protocol

PR fixes

PR fixes

PR fixes

* Fix the drag and drop

PR fixes

* PR changes - update default keys for next/previous stage

* fix: Was storing the custom viewport grid too aggressively

Caused by a PR change misspelling a variable
2023-03-15 12:41:41 -04:00