fix: get direct url pixel data should be optional for video (#4152)

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Igor Octaviano 2024-06-05 13:39:59 -03:00 committed by GitHub
parent 35077f1f02
commit 649ffab4d9
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6 changed files with 416 additions and 42 deletions

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/**
* Generates the rendered URL that can be used for direct retrieve of the pixel data binary stream.
*
* @param {object} config - The configuration object.
* @param {string} config.wadoRoot - The root URL for the WADO service.
* @param {object} params - The parameters object.
* @param {string} params.tag - The tag name of the URL to retrieve.
* @param {string} params.defaultPath - The path for the pixel data URL.
* @param {object} params.instance - The instance object that the tag is in.
* @param {string} params.defaultType - The mime type of the response.
* @param {string} params.singlepart - The type of the part to retrieve.
* @param {string} params.fetchPart - Unknown parameter.
* @param {string} params.url - Unknown parameter.
* @returns {string|Promise<string>} - An absolute URL to the binary stream.
*/
const createRenderedRetrieve = (config, params) => {
const { wadoRoot } = config;
const { instance, tag = 'PixelData' } = params;
const { StudyInstanceUID, SeriesInstanceUID, SOPInstanceUID } = instance;
if (tag === 'PixelData' || tag === 'EncapsulatedDocument') {
return `${wadoRoot}/studies/${StudyInstanceUID}/series/${SeriesInstanceUID}/instances/${SOPInstanceUID}/rendered`;
}
};
export default createRenderedRetrieve;

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import createRenderedRetrieve from './createRenderedRetrieve';
describe('createRenderedRetrieve', () => {
const config = {
wadoRoot: 'https://example.com/wado',
};
const params = {
instance: {
StudyInstanceUID: 'study-uid',
SeriesInstanceUID: 'series-uid',
SOPInstanceUID: 'sop-uid',
},
};
it('should return the rendered URL for PixelData tag', () => {
const result = createRenderedRetrieve(config, {
...params,
tag: 'PixelData',
});
expect(result).toBe(
'https://example.com/wado/studies/study-uid/series/series-uid/instances/sop-uid/rendered'
);
});
it('should return the rendered URL for EncapsulatedDocument tag', () => {
const result = createRenderedRetrieve(config, {
...params,
tag: 'EncapsulatedDocument',
});
expect(result).toBe(
'https://example.com/wado/studies/study-uid/series/series-uid/instances/sop-uid/rendered'
);
});
it('should return undefined for unknown tag', () => {
const result = createRenderedRetrieve(config, {
...params,
tag: 'UnknownTag',
});
expect(result).toBeUndefined();
});
});

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/**
* Generates a URL that can be used for direct retrieve of the bulkdata.
*
* @param {object} config - The configuration object.
* @param {object} params - The parameters object.
* @param {string} params.tag - The tag name of the URL to retrieve.
* @param {string} params.defaultPath - The path for the pixel data URL.
* @param {object} params.instance - The instance object that the tag is in.
* @param {string} params.defaultType - The mime type of the response.
* @param {string} params.singlepart - The type of the part to retrieve.
* @param {string} params.fetchPart - Unknown.
* @returns {string|Promise<string>} - An absolute URL to the resource, if the absolute URL can be retrieved as singlepart,
* or is already retrieved, or a promise to a URL for such use if a BulkDataURI.
*/
const getBulkdataValue = (config, params) => {
const {
instance,
tag = 'PixelData',
defaultPath = '/pixeldata',
defaultType = 'video/mp4',
} = params;
const value = instance[tag];
const { SeriesInstanceUID, SOPInstanceUID } = instance;
const BulkDataURI =
(value && value.BulkDataURI) ||
`series/${SeriesInstanceUID}/instances/${SOPInstanceUID}${defaultPath}`;
const hasQuery = BulkDataURI.indexOf('?') !== -1;
const hasAccept = BulkDataURI.indexOf('accept=') !== -1;
const acceptUri =
BulkDataURI + (hasAccept ? '' : (hasQuery ? '&' : '?') + `accept=${defaultType}`);
// The DICOMweb standard states that the default is multipart related, and then
// separately states that the accept parameter is the URL parameter equivalent of the accept header.
return acceptUri;
};
export default getBulkdataValue;

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import getBulkdataValue from './getBulkdataValue';
jest.mock('@ohif/core');
global.URL.createObjectURL = jest.fn(() => 'blob:');
describe('getBulkdataValue', () => {
const config = {
singlepart: true,
};
const params = {
instance: {
StudyInstanceUID: 'study-uid',
SeriesInstanceUID: 'series-uid',
SOPInstanceUID: 'sop-uid',
},
};
it('should return the BulkDataURI with defaultType if singlepart is true without accept', () => {
const value = {
BulkDataURI: 'https://example.com/bulkdata',
retrieveBulkData: jest.fn().mockResolvedValueOnce(new Uint8Array([0, 1, 2])),
};
const result = getBulkdataValue(config, {
...params,
tag: 'PixelData',
instance: {
...params.instance,
PixelData: value,
},
});
expect(result).toContain(value.BulkDataURI);
expect(result).toContain('accept=video/mp4');
const acceptCount = result.match(/accept=video\/mp4/g)?.length || 0;
expect(acceptCount).toBe(1);
});
it('should return the BulkDataURI with accept', () => {
const value = {
BulkDataURI: 'https://example.com/bulkdata?accept=video/mp4',
};
const result = getBulkdataValue(config, {
...params,
tag: 'PixelData',
instance: {
...params.instance,
PixelData: value,
},
});
expect(result).toContain(value.BulkDataURI);
expect(result).toContain('accept=video/mp4');
const acceptCount = result.match(/accept=video\/mp4/g)?.length || 0;
expect(acceptCount).toBe(1);
});
it('should return the BulkDataURI with accept and query params', () => {
const value = {
BulkDataURI: 'https://example.com/bulkdata?test=123',
};
const result = getBulkdataValue(config, {
...params,
tag: 'PixelData',
instance: {
...params.instance,
PixelData: value,
},
});
expect(result).toContain(value.BulkDataURI);
expect(result).toContain('accept=video/mp4');
expect(result).toContain('test=123');
const acceptCount = result.match(/accept=video\/mp4/g)?.length || 0;
expect(acceptCount).toBe(1);
});
it('should return default path with accept', () => {
const value = {
BulkDataURI: null,
};
const defaultPath = '/testing';
const defaultURI = `series/${params.instance.SeriesInstanceUID}/instances/${params.instance.SOPInstanceUID}${defaultPath}`;
const result = getBulkdataValue(config, {
...params,
defaultPath,
tag: 'PixelData',
instance: {
...params.instance,
PixelData: value,
},
});
expect(result).toContain(defaultURI);
expect(result).toContain('accept=video/mp4');
const acceptCount = result.match(/accept=video\/mp4/g)?.length || 0;
expect(acceptCount).toBe(1);
});
});

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import { utils } from '@ohif/core';
import getBulkdataValue from './getBulkdataValue';
import createRenderedRetrieve from './createRenderedRetrieve';
/**
* Generates a URL that can be used for direct retrieve of the bulkdata
*
@ -15,63 +18,48 @@ import { utils } from '@ohif/core';
* or is already retrieved, or a promise to a URL for such use if a BulkDataURI
*/
const getDirectURL = (config, params) => {
const { wadoRoot, singlepart } = config;
const { singlepart } = config;
const {
instance,
tag = 'PixelData',
defaultPath = '/pixeldata',
defaultType = 'video/mp4',
singlepart: fetchPart = 'video',
url = null,
} = params;
if (url) {
return url;
}
const value = instance[tag];
if (!value) {
return undefined;
}
if (value.DirectRetrieveURL) {
return value.DirectRetrieveURL;
}
if (value.InlineBinary) {
const blob = utils.b64toBlob(value.InlineBinary, defaultType);
value.DirectRetrieveURL = URL.createObjectURL(blob);
return value.DirectRetrieveURL;
}
if (!singlepart || (singlepart !== true && singlepart.indexOf(fetchPart) === -1)) {
if (value.retrieveBulkData) {
// Try the specified retrieve type.
const options = {
mediaType: defaultType,
};
return value.retrieveBulkData(options).then(arr => {
value.DirectRetrieveURL = URL.createObjectURL(new Blob([arr], { type: defaultType }));
return value.DirectRetrieveURL;
});
if (value) {
if (value.DirectRetrieveURL) {
return value.DirectRetrieveURL;
}
if (value.InlineBinary) {
const blob = utils.b64toBlob(value.InlineBinary, defaultType);
value.DirectRetrieveURL = URL.createObjectURL(blob);
return value.DirectRetrieveURL;
}
if (!singlepart || (singlepart !== true && singlepart.indexOf(fetchPart) === -1)) {
if (value.retrieveBulkData) {
// Try the specified retrieve type.
const options = {
mediaType: defaultType,
};
return value.retrieveBulkData(options).then(arr => {
value.DirectRetrieveURL = URL.createObjectURL(new Blob([arr], { type: defaultType }));
return value.DirectRetrieveURL;
});
}
console.warn('Unable to retrieve', tag, 'from', instance);
return undefined;
}
console.warn('Unable to retrieve', tag, 'from', instance);
return undefined;
}
const { StudyInstanceUID, SeriesInstanceUID, SOPInstanceUID } = instance;
const BulkDataURI =
(value && value.BulkDataURI) ||
`series/${SeriesInstanceUID}/instances/${SOPInstanceUID}${defaultPath}`;
const hasQuery = BulkDataURI.indexOf('?') !== -1;
const hasAccept = BulkDataURI.indexOf('accept=') !== -1;
const acceptUri =
BulkDataURI + (hasAccept ? '' : (hasQuery ? '&' : '?') + `accept=${defaultType}`);
if (tag === 'PixelData' || tag === 'EncapsulatedDocument') {
return `${wadoRoot}/studies/${StudyInstanceUID}/series/${SeriesInstanceUID}/instances/${SOPInstanceUID}/rendered`;
}
// The DICOMweb standard states that the default is multipart related, and then
// separately states that the accept parameter is the URL parameter equivalent of the accept header.
return acceptUri;
return createRenderedRetrieve(config, params) || getBulkdataValue(config, params);
};
export default getDirectURL;

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import getDirectURL from './getDirectURL';
import getBulkdataValue from './getBulkdataValue';
import createRenderedRetrieve from './createRenderedRetrieve';
jest.mock('@ohif/core');
jest.mock('./getBulkdataValue');
jest.mock('./createRenderedRetrieve');
global.URL.createObjectURL = jest.fn(() => 'blob:');
describe('getDirectURL', () => {
const config = {
singlepart: true,
defaultType: 'video/mp4',
};
const params = {
tag: 'PixelData',
defaultPath: '/path/to/pixeldata',
instance: {
StudyInstanceUID: 'study-uid',
SeriesInstanceUID: 'series-uid',
SOPInstanceUID: 'sop-uid',
},
};
it('should return the provided URL if it exists', () => {
const url = 'https://example.com/direct-retrieve';
const result = getDirectURL(config, {
...params,
url: 'https://example.com/direct-retrieve',
});
expect(result).toBe(url);
});
it('should return the DirectRetrieveURL if it exists', () => {
const value = {
DirectRetrieveURL: 'https://example.com/direct-retrieve',
};
const result = getDirectURL(config, {
...params,
tag: 'PixelData',
instance: {
...params.instance,
PixelData: value,
},
});
expect(result).toBe(value.DirectRetrieveURL);
});
it('should return the URL for InlineBinary', () => {
const value = {
InlineBinary: 'base64-encoded-data',
};
const result = getDirectURL(config, {
...params,
tag: 'PixelData',
instance: {
...params.instance,
PixelData: value,
},
});
expect(result).toContain('blob:');
});
it('should return the BulkDataURI with defaultType if singlepart is false and there is no retrieveBulkData', () => {
const value = {
BulkDataURI: 'https://example.com/bulkdata',
};
const result = getDirectURL(
{
...config,
singlepart: false,
},
{
...params,
tag: 'PixelData',
instance: {
...params.instance,
PixelData: value,
},
}
);
expect(result).toBeUndefined();
});
it('should return the BulkDataURI with defaultType if singlepart is false with retrieveBulkData', async () => {
const value = {
BulkDataURI: 'https://example.com/bulkdata',
retrieveBulkData: jest.fn().mockResolvedValueOnce(new Uint8Array([0, 1, 2])),
};
const result = await getDirectURL(
{
...config,
singlepart: false,
},
{
...params,
tag: 'PixelData',
instance: {
...params.instance,
PixelData: value,
},
}
);
expect(result).toContain('blob:');
});
it('should return the BulkDataURI with defaultType if singlepart does not include fetchPart', async () => {
const arr = new Uint8Array([0, 1, 2]);
const value = {
BulkDataURI: 'https://example.com/bulkdata',
retrieveBulkData: jest.fn().mockResolvedValueOnce(arr),
};
const result = await getDirectURL(
{
...config,
singlepart: ['audio'],
},
{
...params,
tag: 'PixelData',
instance: {
...params.instance,
PixelData: value,
},
}
);
expect(result).toContain('blob:');
expect(URL.createObjectURL).toHaveBeenCalledWith(new Blob([arr], { type: 'accept=video/mp4' }));
});
it('should return the URL from getBulkdataValue if it exists', () => {
const bulkDataURL = 'https://example.com/bulkdata';
getBulkdataValue.mockReturnValueOnce(bulkDataURL);
const result = getDirectURL(config, params);
expect(getBulkdataValue).toHaveBeenCalledWith(config, params);
expect(result).toBe(bulkDataURL);
});
it('should return the URL from createRenderedRetrieve if getBulkdataValue returns falsy', () => {
const renderedRetrieveURL = 'https://example.com/rendered-retrieve';
getBulkdataValue.mockReturnValueOnce(null);
createRenderedRetrieve.mockReturnValueOnce(renderedRetrieveURL);
const result = getDirectURL(config, params);
expect(getBulkdataValue).toHaveBeenCalledWith(config, params);
expect(createRenderedRetrieve).toHaveBeenCalledWith(config, params);
expect(result).toBe(renderedRetrieveURL);
});
});