feat: Add DICOM SEG support and MPR, referenceLines and StackSync and more (#3015)

* feat: add initial sop class handler for SEG

* feat: move segmentation service

* update segmentation service methods

* fix: viewport data structure

* feat: Add initial render for the DICOM SEG for each displaySet

* fix: various wrong architectural dependencies between services

* feat: initial separate SEG display in each viewport

* feat: refactore viewport action bar

* initial work for SEG hydration

* fix: various bugs regarding drag and dropping different viewports

* fix: rendering issues for multiple seg displaysets

* fix: bugs for thumbnail and hydration

* feat: fix the initial segment color

* update after rebase

* feat: initial design for the segmentation group table

* feat: initial new design for the segmentation panel

* feat: segmentation panel

* feat: make segmentation appear on all related viewports

* fix: segmentation load bug based on functional groups

* initial work for segmentation crosshairs

* fix: various stylings and functionality

* fix: various stylings for the seg panel

* fix: overflow styles

* feat: add more ui components

* feat: added segmentation config

* feat: add jump to segment

* feat: add jump to segment for DICOM SEG viewport

* fix: bugs after rebase

* feat: jump in segmentation viewport

* fix: mpr support for seg

* feat: add more icons

* feat: new icons

* feat: add new side panel

* feat: add segmentation config

* feat: add loading indicator to ohif

* feat: make hanging protocols follow matching rules for viewports

* feat: enhance drag and drop to be hanging protocol aware

* fix: mpr restore previous layout

* fix: crosshairs toggle

* fix: add auth headers to the dicom loader via dicomwebclient

* fix: bug for crosshairs toggle in mpr

* fix: seg viewport reusing old toolGroup

* feat: add loading animation with lottie

* fix: various bugs for Segmentation hydration in mpr

* feat: change outline alpha to outline opacity

* feat: loading indicator for seg viewport

* fix: various segmentation group styles

* fix: local mode for seg

* feat: add animation for the highlight

* fix: loading indicatro to show segment indices

* feat: enhance modality drop down ui

* fix: panels

* fix: download form

* fix: layout shift in loading indicator

* fix: loading indicator to have correct values

* fix: update software number

* fix: image jump between MPR and default

* fix: segmentation cleanup and cine service cleanup

* fix: segmentation toolgroup clena up

* fix: highlight interval should not trigger again

* fix: issue with multiframe sorting

* rename: change onSeriesChange to onArrowsClick

* fix: buttons for tmtv and layout shift

* fix: various bugs wrt crosshairs

* fix: crosshairs re init on reset camera

* fix: middle slice calculation different from cs middle reset camera

* fix: reset camera should reset viewport camera

* fix: loading segments in MPR mode

* fix: tmtv hp back to before

* fix: layout shift

* feat: orientation markers for volume viewport

* fix: capture for volume viewports

* fix: memory leak for back to worklist

* fix: loading bar bg color

* fix: side panel for only one panel

* fix: react select style in production

* fix: various styling for segmentation groups

* fix: various ui styles

* feat: add new segmentation config styles

* fix: hover state for segmentation item

* fix: side panel layout shift

* temp add panels

* try to fix scrollbar for thimbnail

* fix: scroll not appearing for side panels

* feat: changed styles for scrollbar

* feat: add cpu fallback warning

* fix: webworker destroy

* fix: select styles

* fix: orientation marker color and position

* fix: capture screenshot for volume viewports

* fix: hide segment visibility on mpr

* fix: reloading an already loaded seg displayset

* feat: add is equal

* fix: mpr jump to measurements

* apply review comments

* fix: optimization for the segmentation load

* fix: remove unnecessary context menu and hp service reset

* fix: segmentation service wrt brush settings

* feat: initial work for the stack synchronization

* fix: add validateDisplaySetSelectorsForNewDisplaySets to make sure drag and drop can follow requirements

* fix: various react proptypes

* fix: thumbnails for the tmtv and change default props to default params

* feat: make showing loading indicator configurable and add docs

* bump versions and add more docs

* fix demo

* update cornerstone versions

* apply review comments

* feat: add reference lines

* fix build

* fix unit tests

* add reference lines icon

* fix: e2e tests

* fix static wado config

* docs: add segmentation service docs

* fix: docker build

* fix: keep camera and bump versions

* Try re-enabling minification to fix deploy previews

Co-authored-by: Erik Ziegler <erik.sweed@gmail.com>
This commit is contained in:
AlirezaandErik Ziegler authored and GitHub committed 2022-11-16 14:19:52 -05:00
1 parent 08c58b0634
commit 83ea228d86
254 files changed
+12856 -3141

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@@ -26,6 +26,7 @@ const DEFAULT_STATE = {
},
],
activeViewportIndex: 0,
cachedLayout: {},
};
export const ViewportGridContext = createContext(DEFAULT_STATE);
@@ -73,10 +74,15 @@ export function ViewportGridProvider({ children, service }) {
viewportLabel: viewportLabels[viewportIndex],
};
return { ...state, ...{ viewports }, cachedLayout: null };
return { ...state, ...{ viewports } };
}
case 'SET_LAYOUT': {
const { numCols, numRows, layoutType, layoutOptions } = action.payload;
const {
numCols,
numRows,
layoutOptions,
layoutType = 'grid',
} = action.payload;
// If empty viewportOptions, we use numRow and numCols to calculate number of viewports
const numPanes = layoutOptions.length || numRows * numCols;
@@ -119,7 +125,6 @@ export function ViewportGridProvider({ children, service }) {
layoutType,
viewports,
},
cachedLayout: null,
};
}
case 'RESET': {
@@ -139,13 +144,41 @@ export function ViewportGridProvider({ children, service }) {
height: 100,
},
],
cachedLayout: null,
cachedLayout: {},
};
}
// The SET_CACHE_LAYOUT action can be used for caching a layout
// for instance double clicking a viewport to maximize it.
// and then restoring the previous layout when the viewport is
// double clicked again.
case 'SET_CACHED_LAYOUT': {
return { ...state, cachedLayout: action.payload };
const { cacheId, cachedLayout } = action.payload;
// deep copy the cachedLayout into the state
return {
...state,
cachedLayout: {
...state.cachedLayout,
[cacheId]: JSON.parse(JSON.stringify(cachedLayout)),
},
};
}
case 'RESTORE_CACHED_LAYOUT': {
const cacheId = action.payload;
if (!state.cachedLayout[cacheId]) {
console.warn(
`No cached layout found for cacheId: ${cacheId}. Ignoring...`
);
return state;
}
const cachedLayout = state.cachedLayout;
return { ...state.cachedLayout[cacheId], cachedLayout };
}
case 'SET': {
return {
...state,
@@ -163,7 +196,9 @@ export function ViewportGridProvider({ children, service }) {
DEFAULT_STATE
);
const getState = useCallback(() => viewportGridState, [viewportGridState]);
const getState = useCallback(() => {
return viewportGridState;
}, [viewportGridState]);
const setActiveViewportIndex = useCallback(
index => dispatch({ type: 'SET_ACTIVE_VIEWPORT_INDEX', payload: index }),
@@ -189,6 +224,15 @@ export function ViewportGridProvider({ children, service }) {
[dispatch]
);
const setDisplaySetsForViewports = useCallback(
viewports => {
viewports.forEach(data => {
setDisplaySetsForViewport(data);
});
},
[setDisplaySetsForViewport]
);
const setLayout = useCallback(
({ layoutType, numRows, numCols, layoutOptions = [] }) =>
dispatch({
@@ -221,6 +265,16 @@ export function ViewportGridProvider({ children, service }) {
[dispatch]
);
const restoreCachedLayout = useCallback(
cacheId => {
dispatch({
type: 'RESTORE_CACHED_LAYOUT',
payload: cacheId,
});
},
[dispatch]
);
const set = useCallback(
payload =>
dispatch({
@@ -231,7 +285,7 @@ export function ViewportGridProvider({ children, service }) {
);
/**
* Sets the implementation of a modal service that can be used by extensions.
* Sets the implementation of ViewportGridService that can be used by extensions.
*
* @returns void
*/
@@ -241,9 +295,11 @@ export function ViewportGridProvider({ children, service }) {
getState,
setActiveViewportIndex,
setDisplaySetsForViewport,
setDisplaySetsForViewports,
setLayout,
reset,
setCachedLayout,
restoreCachedLayout,
set,
});
}
@@ -252,18 +308,22 @@ export function ViewportGridProvider({ children, service }) {
service,
setActiveViewportIndex,
setDisplaySetsForViewport,
setDisplaySetsForViewports,
setLayout,
reset,
setCachedLayout,
restoreCachedLayout,
set,
]);
const api = {
getState,
setActiveViewportIndex,
setActiveViewportIndex: index => service.setActiveViewportIndex(index), // run it through the service itself since we want to publish events
setDisplaySetsForViewport,
setDisplaySetsForViewports,
setLayout,
setCachedLayout,
restoreCachedLayout,
reset,
set,
};