Commit Graph
191 Commits
Author SHA1 Message Date
ohif-bot c529c0da9c chore(version): version.json [skip ci] 2023-06-19 14:44:10 +00:00
ohif-bot 2d8400f9d8 chore(version): Update package versions [skip ci] 2023-06-19 14:10:15 +00:00
ohif-bot e12242a15c chore(version): version.json [skip ci] 2023-06-19 14:10:11 +00:00
ohif-bot a34a0b1a3a chore(version): Update package versions [skip ci] 2023-06-19 13:47:55 +00:00
ohif-bot e1545b67da chore(version): version.json [skip ci] 2023-06-19 13:47:52 +00:00
ohif-bot 242beb7b46 chore(version): Update package versions [skip ci] 2023-06-19 13:39:11 +00:00
ohif-bot c5d4e97115 chore(version): version.json [skip ci] 2023-06-19 13:39:07 +00:00
ohif-bot 971c594791 chore(version): Update package versions [skip ci] 2023-06-19 13:22:44 +00:00
ohif-bot c55136f55e chore(version): version.json [skip ci] 2023-06-19 13:22:41 +00:00
ohif-bot c75c6af22f chore(version): Update package versions [skip ci] 2023-06-19 13:09:00 +00:00
ohif-bot 3c777ba58b chore(version): version.json [skip ci] 2023-06-19 13:08:56 +00:00
ohif-bot 652e61a417 chore(version): Update package versions [skip ci] 2023-06-15 17:08:06 +00:00
ohif-bot 48bcdd6b50 chore(version): version.json [skip ci] 2023-06-15 17:08:01 +00:00
ohif-bot 3dce70e624 chore(version): Update package versions [skip ci] 2023-06-13 12:59:35 +00:00
ohif-bot 1d00893c49 chore(version): version.json [skip ci] 2023-06-13 12:59:31 +00:00
ohif-bot a6d967a37e chore(version): Update package versions [skip ci] 2023-06-13 02:41:20 +00:00
ohif-bot f23a4500f5 chore(version): version.json [skip ci] 2023-06-13 02:41:17 +00:00
ohif-bot a74e5a733f chore(version): Update package versions [skip ci] 2023-06-13 02:12:34 +00:00
ohif-bot 9326c4fffc chore(version): version.json [skip ci] 2023-06-13 02:12:31 +00:00
ohif-bot cd1d097957 chore(version): Update package versions [skip ci] 2023-06-12 18:34:02 +00:00
ohif-bot 866647ae79 chore(version): version.json [skip ci] 2023-06-12 18:33:58 +00:00
ohif-bot 0e52169677 chore(version): Update package versions [skip ci] 2023-06-08 17:33:51 +00:00
ohif-bot b23cbc34dd chore(version): version.json [skip ci] 2023-06-08 17:33:48 +00:00
ohif-bot ca07ef2928 chore(version): Update package versions [skip ci] 2023-06-07 13:40:47 +00:00
ohif-bot 48aa945839 chore(version): version.json [skip ci] 2023-06-07 13:40:43 +00:00
Bill Wallace 3d8cc9801a chore(packages): Remove duplicated packages (#3456) 2023-06-07 09:33:13 -04:00
ohif-bot 655ccd310e chore(version): Update package versions [skip ci] 2023-06-07 13:13:40 +00:00
ohif-bot 20275d7d08 chore(version): version.json [skip ci] 2023-06-07 13:13:36 +00:00
ohif-bot 9ee13860a2 chore(version): Update package versions [skip ci] 2023-06-07 12:38:24 +00:00
ohif-bot f43e45ab1a chore(version): version.json [skip ci] 2023-06-07 12:38:21 +00:00
ohif-bot ffaffbdfa3 chore(version): Update package versions [skip ci] 2023-06-07 01:54:54 +00:00
ohif-bot de35860ba6 chore(version): version.json [skip ci] 2023-06-07 01:54:51 +00:00
ohif-bot 6d7561946b chore(version): Update package versions [skip ci] 2023-06-06 21:47:27 +00:00
ohif-bot fd8a9599d7 chore(version): version.json [skip ci] 2023-06-06 21:47:23 +00:00
ohif-bot ef9363e8b9 chore(version): Update package versions [skip ci] 2023-06-06 20:11:21 +00:00
ohif-bot 77a8447ceb chore(version): version.json [skip ci] 2023-06-06 20:11:17 +00:00
Alireza fc8b948b0d chore(build): separate half and half for publish (#3446) 2023-06-06 16:02:59 -04:00
Alireza 828690cd3b chore(build): try to build demo and docs (#3434) 2023-06-06 13:34:26 -04:00
Alireza c7bcf1134d fix(staticwado): SM and RT and update the server with new data (#3422)
* fix bugs for the RT for the new demo

* fix SM with the static-wado server

* remove thumbnail from tmtv

* migration guide

* fix stability for the rt struct

* apply review comments

* add loading indicator to SM

* pdf works

* try to fix relative bulkData

* fix the rest

* fix preflight for the SM

* fix typo

* apply review comments

* yarn lock
2023-05-29 09:04:49 -04:00
Alireza f1c0581313 fix(thumbnail): it was commented out by mistake (#3403) 2023-05-17 14:13:19 -04:00
Alireza e055f25ea6 fix(local): should use dicomlocal for localbasic (#3397)
* fix(local): should use dicomlocal for localbasic

* chore(github): styling for issues forms

* try to fix netlify

* apply review comments

* apply review comments
2023-05-17 12:45:06 -04:00
AlirezaandBill Wallace 1881ce5cbc feat(custom displayOptions): add custom options to every level of hp (#3372)
* feat(custom displayOptions): add custom options to every level of hanging protocols

* move set preset down to cornerstone3d

* works

* fix tmtv based on new api

* fix unit test

* close

* review1

* upgrade packages

* update packages

* apply review comments

* recursive call

* less copy

* apply review comments

* fix e2e tests

* apply review comments

* revert

* apply review comments

* apply review comments

---------

Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2023-05-16 13:07:37 -04:00
Bill WallaceandAlireza d5c5951e57 fix(SR): KO series being displayed in browser list (#3382)
* fix: KO series being displayed in browser list

* fix sr for volume viewports

* move highlight labelmap to RAF

* remove commented code

* fix the hydration bug for the SR

* apply review comments

* revert the key images for sr

* Remove some obsolete changes

* set initial image for sr instead of jump

* Remove viewportType stack

---------

Co-authored-by: Alireza <ar.sedghi@gmail.com>
2023-05-15 08:23:13 -04:00
Bill Wallace a688f03fdb feat(App): Loads mode extensions on demand (#3312)
* feat: Dynamic plugin imports

* Remove unused file

* Fix basic dev mode

* Fix the modes issue that Joe requested

* Merge fixes

* Add the ability to publish directory contents

* PR review changes

---------
2023-05-08 21:18:35 -04:00
Alireza 2f355fa158 fix(cli): better support for external modules and toolGroups in templates (#3364)
* choe(modes, components): improved readability

This commit includes changes to improve performance in the basic-dev-mode and Thumbnail components.
Additionally, a change in the webpack configuration file was made to ignore ".min.js.map" files.
The defaultDataSourceName was also added to several configuration files, and whiteLabeling code was removed
from the local_orthanc configuration file.

* fix(cli): better path management and add dependencies

* better docs

* add default tool group to the templates

* add review comments

* apply review comments

* try to fix test

* fix thumbnail in tests
2023-05-08 15:49:28 -04:00
M.D 075008c674 feat(microscopy): add dicom microscopy extension and mode (#3247)
* skeleton for dicom-microscopy extension

* skeleton for microscopy mode

* [feat] ported @radicalimaging/microscopy-dicom to OHIF's default extension

* [feat] ported microscopy mode from private repo

* added new definitions to the package.json

* webpack configuration update for microscopy extension

* register new icons for microscopy tools

* fixes to the microscopy extension and mode

* trivial error fix - typescript type import error

* link microscopy extension with default OHIF app plugin config

* demo config fix

* fix logs

* remove unsed imports

* [fix] loading of microscopy

* [fix] webworker script loading, normalizing denaturalized dataset

* found the latest version of dicom-microscopy-viewer that works with current OHIF extension : 0.35.2

* hide thumbnail pane by default, as we have issues with

* comments

* remove unused code

* [feat] microscopy - annotation selection

* [feat] microscopy - edit annotation label

* wip

* [bugfix] dicom-microscopy tool

* [bugfix] dicom microscopy annotations

* [fix] mixed-content blocking caused by BulkDataURI

* [fix] microscopy measurements panel - center button

* [fix] microscopy measurements panel - styling

* [fix] microscopy - controls

* fix local loading of microscopy

* fix local loading of dicom microscopy

* fix typo - indexof to indexOf

* [fix] remove unused icons

* remove commented out lines from webpack configuration

* platform/viewer/public/config/default.js - revert accidental changes

* [refactor] redirecting to microscopy mode on Local mode

* attribution to DMV and SLIM viewer

* [fix] code review feedbacks

* fix thumbnails

* [fix] microscopy - fix old publisher.publish() to PubSubService._broadcastEvent()

* [fix] interactions, webpack config, roi selection

* [feat] microscopy - remove select tool  from UI

* microscopy author

* [fix] saving and loading SR

* [bugfix] - missing publish() function in MicroscopyService, replace with _broadcastEvent

* remove author section from readme

* refactor SR saving feature

* fix webpack config after merge

* [bugfix] repeated import

* fix e2e

* webpack configuration

* hide "Create report" button for microscopy
2023-04-27 20:53:52 -04:00
Alireza 66863281c4 feat(RT): add dicom RT support via volume viewports (#3310)
* feat: initial RT support

* make the segmentation service work with representation data

* feat: make segmentation service work with representations

* fix rtss vis

* fix: rt hydration

* fix the rendering of rt names

* fix imports

* refactor: Modify status and click handling for hydration of RTStructures

Modify status and click handling for hydration of RTStructures by renaming `onPillClick` to `onStatusClick` in `OHIFCornerstoneRTViewport.tsx` and `_getStatusComponent.tsx` files. Also, update initial segmentation configurations in `PanelSegmentation.tsx` and simplify configuration changes and values for segmentation service in `SegmentationService.ts`. Finally, remove console debug in `CornerstoneViewportService.ts`.

* wip for highlighting contours

* refactor rt displayset code

* review code update

* update cornerstone dependencies

* refactor: Update license year, version number, and minor code cleanup

This commit updates the license year in several files, updates the version number in package.json, and contains minor code cleanup in two files.

* add bulkdataURI retrieve for RT

* fix package version

* apply review comments

* apply review comments

* apply review comments

* feat(panels): refactor and streamline segmentation configuration and inputs

Rewrote state hooks and streamlined the configuration input for `PanelSegmentation` to be more verbose and reusable. Included several new input types, including the `InputRange` component which now shows a fixed floating value based on the step provided. The `SegmentationConfig` component now works with dynamic values controlled by `initialConfig`. These changes should improve function usability and make the code more maintainable going forward.

* fix various bugs

* fix contour delete by upgrade cs3d version

* feat(viewport, inputNumber, segmentationConfig, orthanc): Implement minimum and maximum values for input number components, and useBulkDataURI for Orthanc configuration. Compare measurement view planes with absolute viewport view planes in Cornerstone viewport.

* update yarn lock
2023-04-26 12:21:08 -04:00
Bill Wallace c508a2b6bc feat: Add a new hanging protocol @ohif/mn (#3305)
* feat: Add a new hanging protocol @ohif/mn

* Add @ohif/seg example

* PR comments and a couple more fixes to make things cleaner

* PR comment

* Added an example to cause the PR checks to rerun
2023-04-18 11:55:25 -04:00
M.D 47c25f4364 feat(measurements): add CircleROI Tool (#3211)
* [refactor] measurement service mapping files - rename to .ts files

* [fix] RectangleROI - measurement service mapping _getReport() function - tool name fix

* [feat] added CircleROI tool from updated cornerstone3D

* [refactor] fix for typescript strong typing warnings

* [feat] cornerstone-dicom-sr extension - added CircleROI tool

* [feat] added toolbar button for CircleROI tool

* [doc] doc updates for CircleROI tool

* [update] library - dcmjs to 0.29.5

* [fix] roundNumber() function when given strings

* [fix] refactor after upgrading conerstonejs library 0.49.0

* yarn.lock file change
2023-04-17 08:23:03 -04:00
Bill Wallace 50ed96ff73 feat(URL): add param for initial series and sop uids to display (#3265)
* feat: Allow navigating to a specified series and sop instance

This was a feature in OHIF v2, so adding it to v3, albeit with new
parameters.

feat: Allow comma separated as well as repeated args params

* docs

* Test fixes

* feat: Navigate to SOP selected - PR fixes

* Updated docs

* PR fixes
2023-04-05 12:59:56 -04:00