fix(availableTools): add ArrowAnnotate as an available tool (#667 )

* add ArrowAnnotate as an available tool * review response - remove the cargo culted mouseButtonMasks
fix(ToolbarRow): Update ToolbarRow so that an activeButton in a submenu is passed in as an activeCom (#668 )
2019-07-17 09:45:29 -04:00 · 2019-07-17 10:13:59 +02:00 · 2019-07-16 22:41:41 -04:00 · 2019-07-15 10:09:58 -04:00 · 2019-07-11 23:32:49 +02:00 · 2019-07-11 09:54:49 -07:00
893 changed files with 35100 additions and 64401 deletions
@@ -0,0 +1,19 @@
+{
+  "presets": [
+    [
+      "@babel/preset-env",
+      {
+        "targets": {
+          "ie": "11"
+        }
+      }
+    ],
+    "@babel/preset-react"
+  ],
+  "plugins": [
+    "@babel/plugin-proposal-class-properties",
+    "@babel/plugin-syntax-dynamic-import",
+    "@babel/plugin-transform-regenerator",
+    "@babel/plugin-transform-runtime"
+  ]
+}
@@ -1,4 +1,4 @@
-version: 2.1
+version: 2

 ### ABOUT
 #
@@ -9,26 +9,17 @@ version: 2.1
 # create pull request previews and to update `https://docs.ohif.org`
 ###

-orbs:
-  codecov: codecov/codecov@1.0.5
-
 defaults: &defaults
-  docker:
-    - image: circleci/node:10.16.0
  working_directory: ~/repo
+  docker:
+    - image: circleci/node:10.15.1

 jobs:
-  PR_UNIT_TESTS:
+  build_and_test:
    <<: *defaults
-
    steps:
-      # Enable yarn workspaces
-      - run: yarn config set workspaces-experimental true
-
-      # Checkout code and ALL Git Tags
-      - checkout:
-          post:
-            - git fetch --all
+      # Download and cache dependencies
+      - checkout
      - restore_cache:
          name: Restore Yarn and Cypress Package Cache
          keys:
@@ -44,100 +35,19 @@ jobs:
          paths:
            - ~/.cache ## Cache yarn and Cypress
          key: yarn-packages-v1-{{ .Branch }}-{{ checksum "yarn.lock" }}
-
-      # RUN TESTS
+      # Build & Test
+      - run: yarn build:package:ci
+      # https://www.viget.com/articles/using-junit-on-circleci-2-0-with-jest-and-eslint/
      - run:
-          name: "JavaScript Test Suite"
-          command: yarn run test:unit:ci
-
-      # PLATFORM/VIEWER
-      - run:
-          name: "VIEWER: Combine report output"
-          command: |
-            viewerCov="/home/circleci/repo/platform/viewer/coverage"
-            touch "${viewerCov}/reports"
-            cat "${viewerCov}/clover.xml" >> "${viewerCov}/reports"
-            echo "\<<\<<\<< EOF" >> "${viewerCov}/reports"
-            cat "${viewerCov}/lcov.info" >>"${viewerCov}/reports"
-            echo "\<<\<<\<< EOF" >> "${viewerCov}/reports"
-      - codecov/upload:
-          file: "/home/circleci/repo/platform/viewer/coverage/reports"
-          flags: "viewer"
-
-      # PLATFORM/CORE
-      - run:
-          name: "CORE: Combine report output"
-          command: |
-            coreCov="/home/circleci/repo/platform/core/coverage"
-            touch "${coreCov}/reports"
-            cat "${coreCov}/clover.xml" >> "${coreCov}/reports"
-            echo "\<<\<<\<< EOF" >> "${coreCov}/reports"
-            cat "${coreCov}/lcov.info" >> "${coreCov}/reports"
-            echo "\<<\<<\<< EOF" >> "${coreCov}/reports"
-      - codecov/upload:
-          file: "/home/circleci/repo/platform/core/coverage/reports"
-          flags: "core"
-
-  MERGE_UNIT_TESTS:
-    <<: *defaults
-
-    steps:
-      # Enable yarn workspaces
-      - run: yarn config set workspaces-experimental true
-
-      # Checkout code and ALL Git Tags
-      - checkout:
-          post:
-            - git fetch --all
-      - restore_cache:
-          name: Restore Yarn and Cypress Package Cache
-          keys:
-            # when lock file changes, use increasingly general patterns to restore cache
-            - yarn-packages-v1-{{ .Branch }}-{{ checksum "yarn.lock" }}
-            - yarn-packages-v1-{{ .Branch }}-
-            - yarn-packages-v1-
-      - run:
-          name: Install Dependencies
-          command: yarn install --frozen-lockfile
-      - save_cache:
-          name: Save Yarn Package Cache
-          paths:
-            - ~/.cache ## Cache yarn and Cypress
-          key: yarn-packages-v1-{{ .Branch }}-{{ checksum "yarn.lock" }}
-
-      # RUN TESTS
-      - run:
-          name: "JavaScript Test Suite"
-          command: yarn run test:unit:ci
-
-      # PLATFORM/VIEWER
-      - run:
-          name: "VIEWER: Combine report output"
-          command: |
-            viewerCov="/home/circleci/repo/platform/viewer/coverage"
-            touch "${viewerCov}/reports"
-            cat "${viewerCov}/clover.xml" >> "${viewerCov}/reports"
-            echo "\<<\<<\<< EOF" >> "${viewerCov}/reports"
-            cat "${viewerCov}/lcov.info" >>"${viewerCov}/reports"
-            echo "\<<\<<\<< EOF" >> "${viewerCov}/reports"
-      - codecov/upload:
-          file: "/home/circleci/repo/platform/viewer/coverage/reports"
-          flags: "viewer"
-
-      # PLATFORM/CORE
-      - run:
-          name: "CORE: Combine report output"
-          command: |
-            coreCov="/home/circleci/repo/platform/core/coverage"
-            touch "${coreCov}/reports"
-            cat "${coreCov}/clover.xml" >> "${coreCov}/reports"
-            echo "\<<\<<\<< EOF" >> "${coreCov}/reports"
-            cat "${coreCov}/lcov.info" >> "${coreCov}/reports"
-            echo "\<<\<<\<< EOF" >> "${coreCov}/reports"
-      - codecov/upload:
-          file: "/home/circleci/repo/platform/core/coverage/reports"
-          flags: "core"
-
+          name: 'JavaScript Test Suite'
+          command: yarn test:unit:ci
+          environment:
+            JEST_JUNIT_OUTPUT: 'reports/junit/js-test-results.xml'
+      # Store result
+      - store_test_results:
+          path: reports/junit
+      - store_artifacts:
+          path: reports/junit
      # Persist :+1:
      - persist_to_workspace:
          root: ~/repo
@@ -165,6 +75,7 @@ jobs:
      # Could do a check here, if it doesn't exist, install cypress?
      - run: yarn install
      - run: yarn run test:e2e:ci
+      - run: yarn run test:e2e:scriptTag

  npm_publish:
    <<: *defaults
@@ -257,7 +168,7 @@ jobs:
          key: yarn-packages-v1-{{ .Branch }}-{{ checksum "yarn.lock" }}
      # Build & Test
      - run:
-          name: "Build Demo Site, Upload SourceMaps, Send Deploy Notification"
+          name: 'Build Demo Site, Upload SourceMaps, Send Deploy Notification'
          command: |
            yarn build:demo:ci
            perl -i -pe 's#</head>#`cat .circleci/rollbar.html` #e' build/index.html
@@ -304,7 +215,7 @@ workflows:
  # PULL REQUESTS
  pull_requests:
    jobs:
-      - PR_UNIT_TESTS:
+      - build_and_test:
          filters:
            branches:
              ignore:
@@ -315,13 +226,13 @@ workflows:
  # MERGE TO MASTER
  cut_release:
    jobs:
-      - MERGE_UNIT_TESTS:
+      - build_and_test:
          filters:
            branches:
              only: master
      - e2e_test:
          requires:
-            - MERGE_UNIT_TESTS
+            - build_and_test
      # Update NPM
      - npm_publish:
          requires:
@@ -9,15 +9,4 @@ coverage:
    project:
      default:
        threshold: 0.10%
-      core:
-        flags: core
-      viewer:
-        flags: viewer
    patch: off
-flags:
-  core:
-    paths:
-      - platform/core
-  viewer:
-    paths:
-      - platform/viewer
@@ -1,5 +1,6 @@
 # Output
 dist/
+build/

 # Dependencies
 node_modules/
@@ -7,6 +8,7 @@ node_modules/
 # Root
 README.md
 Dockerfile
+dockerfile

 # Misc. Config
 .git
@@ -14,3 +16,8 @@ Dockerfile
 .gitignore
 .vscode
 .circleci
+
+# Unnecessary things to pull into container
+extensions
+docs
+cypress
@@ -1,10 +1,5 @@
 {
-  "extends": [
-    "react-app",
-    "eslint:recommended",
-    "plugin:react/recommended",
-    "plugin:prettier/recommended"
-  ],
+  "extends": ["react-app", "eslint:recommended", "plugin:react/recommended"],
  "parser": "babel-eslint",
  "env": {
    "jest": true
@@ -0,0 +1,40 @@
+# These settings are for any web project
+
+# Handle line endings automatically for files detected as text
+# and leave all files detected as binary untouched.
+* text=auto
+
+# Force the following filetypes to have unix eols, so Windows does not break them
+*.* text eol=lf
+
+# Windows forced line-endings
+/.idea/* text eol=crlf
+
+#
+## These files are binary and should be left untouched
+#
+
+# (binary is a macro for -text -diff)
+*.png binary
+*.jpg binary
+*.jpeg binary
+*.gif binary
+*.ico binary
+*.mov binary
+*.mp4 binary
+*.mp3 binary
+*.flv binary
+*.fla binary
+*.swf binary
+*.gz binary
+*.zip binary
+*.7z binary
+*.ttf binary
+*.eot binary
+*.woff binary
+*.pyc binary
+*.pdf binary
+*.ez binary
+*.bz2 binary
+*.swp binary
+*.fig binary
@@ -0,0 +1,45 @@
+{
+    "requireCurlyBraces": {
+        "keywords": [ "if", "else", "for", "while", "do" ],
+        "allExcept" : ["return" , "continue", "break"]
+    },
+    "requireSpaceAfterKeywords": [ "if", "else", "for", "while", "do", "switch", "return" ],
+    "requireSpacesInFunctionExpression": {
+        "beforeOpeningCurlyBrace": true
+    },
+    "disallowSpacesInFunctionExpression": {
+        "beforeOpeningRoundBrace": true
+    },
+    "disallowSpacesInsideParentheses": true,
+    "disallowKeywordsOnNewLine": ["else"],
+    "disallowNewlineBeforeBlockStatements": true,
+    "requirePaddingNewLinesAfterUseStrict": true,
+    "requirePaddingNewLinesAfterBlocks": {
+        "allExcept": ["inCallExpressions", "inArrayExpressions", "inProperties"]
+    },
+    "requireObjectKeysOnNewLine": true,
+    "requireSemicolons": true,
+    "requireSpaceAfterBinaryOperators": true,
+    "requireSpaceAfterComma": true,
+    "requireSpaceBeforeObjectValues": true,
+    "requireSpacesInsideObjectBrackets": "all",
+    "requireLineBreakAfterVariableAssignment": true,
+    "requireSpaceBeforeBinaryOperators": ["+", "-", "/", "*", "=", "==", "===", "!=", "!=="],
+    "disallowSpaceAfterPrefixUnaryOperators": ["++", "--", "+", "-"],
+    "disallowSpaceBeforePostfixUnaryOperators": ["++", "--"],
+    "disallowKeywords": [ "with" ],
+    "disallowMultipleLineBreaks": true,
+    "requireLineFeedAtFileEnd": true,
+    "disallowSpaceAfterObjectKeys": true,
+    "disallowQuotedKeysInObjects": true,
+    "disallowMultipleSpaces": true,
+    "disallowVar": true,
+    "validateLineBreaks": "LF",
+    "validateIndentation": 4,
+    "validateQuoteMarks": {
+        "mark": "'",
+        "escape": true
+    },
+    "validateParameterSeparator": ", ",
+    "requireDollarBeforejQueryAssignment": true
+}
@@ -0,0 +1,93 @@
+{
+    // JSHint Default Configuration File (as on JSHint website)
+    // See http://jshint.com/docs/ for more details
+
+    "maxerr"        : 50,       // {int} Maximum error before stopping
+
+    // Enforcing
+    "bitwise"       : true,     // true: Prohibit bitwise operators (&, |, ^, etc.)
+    "camelcase"     : false,    // true: Identifiers must be in camelCase
+    "curly"         : false,     // true: Require {} for every new block or scope
+    "eqeqeq"        : true,     // true: Require triple equals (===) for comparison
+    "forin"         : true,     // true: Require filtering for..in loops with obj.hasOwnProperty()
+    "freeze"        : true,     // true: prohibits overwriting prototypes of native objects such as Array, Date etc.
+    "immed"         : false,    // true: Require immediate invocations to be wrapped in parens e.g. `(function () { } ());`
+    "latedef"       : false,    // true: Require variables/functions to be defined before being used
+    "newcap"        : false,    // true: Require capitalization of all constructor functions e.g. `new F()`
+    "noarg"         : true,     // true: Prohibit use of `arguments.caller` and `arguments.callee`
+    "noempty"       : true,     // true: Prohibit use of empty blocks
+    "nonbsp"        : true,     // true: Prohibit "non-breaking whitespace" characters.
+    "nonew"         : false,    // true: Prohibit use of constructors for side-effects (without assignment)
+    "plusplus"      : false,    // true: Prohibit use of `++` and `--`
+    "quotmark"      : false,    // Quotation mark consistency:
+                                //   false    : do nothing (default)
+                                //   true     : ensure whatever is used is consistent
+                                //   "single" : require single quotes
+                                //   "double" : require double quotes
+    "undef"         : true,     // true: Require all non-global variables to be declared (prevents global leaks)
+    "unused"        : "vars",   // Unused variables:
+                                //   true     : all variables, last function parameter
+                                //   "vars"   : all variables only
+                                //   "strict" : all variables, all function parameters
+    "strict"        : false,    // true: Requires all functions run in ES5 Strict Mode
+    "maxparams"     : false,    // {int} Max number of formal params allowed per function
+    "maxdepth"      : false,    // {int} Max depth of nested blocks (within functions)
+    "maxstatements" : false,    // {int} Max number statements per function
+    "maxcomplexity" : false,    // {int} Max cyclomatic complexity per function
+    "maxlen"        : false,    // {int} Max number of characters per line
+    "varstmt"       : false,    // true: Disallow any var statements. Only `let` and `const` are allowed.
+
+    // Relaxing
+    "asi"           : false,     // true: Tolerate Automatic Semicolon Insertion (no semicolons)
+    "boss"          : false,     // true: Tolerate assignments where comparisons would be expected
+    "debug"         : false,     // true: Allow debugger statements e.g. browser breakpoints.
+    "eqnull"        : false,     // true: Tolerate use of `== null`
+    "es5"           : true,      // true: Allow ES5 syntax (ex: getters and setters)
+    "esnext"        : true,      // true: Allow ES.next (ES6) syntax (ex: `const`)
+    "moz"           : false,     // true: Allow Mozilla specific syntax (extends and overrides esnext features)
+                                 // (ex: `for each`, multiple try/catch, function expression…)
+    "evil"          : false,     // true: Tolerate use of `eval` and `new Function()`
+    "expr"          : false,     // true: Tolerate `ExpressionStatement` as Programs
+    "funcscope"     : false,     // true: Tolerate defining variables inside control statements
+    "globalstrict"  : false,     // true: Allow global "use strict" (also enables 'strict')
+    "iterator"      : false,     // true: Tolerate using the `__iterator__` property
+    "lastsemic"     : false,     // true: Tolerate omitting a semicolon for the last statement of a 1-line block
+    "laxbreak"      : false,     // true: Tolerate possibly unsafe line breakings
+    "laxcomma"      : false,     // true: Tolerate comma-first style coding
+    "loopfunc"      : false,     // true: Tolerate functions being defined in loops
+    "multistr"      : false,     // true: Tolerate multi-line strings
+    "noyield"       : false,     // true: Tolerate generator functions with no yield statement in them.
+    "notypeof"      : false,     // true: Tolerate invalid typeof operator values
+    "proto"         : false,     // true: Tolerate using the `__proto__` property
+    "scripturl"     : false,     // true: Tolerate script-targeted URLs
+    "shadow"        : false,     // true: Allows re-define variables later in code e.g. `var x=1; x=2;`
+    "sub"           : false,     // true: Tolerate using `[]` notation when it can still be expressed in dot notation
+    "supernew"      : false,     // true: Tolerate `new function () { ... };` and `new Object;`
+    "validthis"     : false,     // true: Tolerate using this in a non-constructor function
+
+    // Environments
+    "browser"       : true,     // Web Browser (window, document, etc)
+    "browserify"    : false,    // Browserify (node.js code in the browser)
+    "couch"         : false,    // CouchDB
+    "devel"         : false,    // Development/debugging (alert, confirm, etc)
+    "dojo"          : false,    // Dojo Toolkit
+    "jasmine"       : false,    // Jasmine
+    "jquery"        : true,     // jQuery
+    "mocha"         : false,    // Mocha
+    "mootools"      : false,    // MooTools
+    "node"          : false,    // Node.js
+    "nonstandard"   : false,    // Widely adopted globals (escape, unescape, etc)
+    "phantom"       : false,    // PhantomJS
+    "prototypejs"   : false,    // Prototype and Scriptaculous
+    "qunit"         : false,    // QUnit
+    "rhino"         : false,    // Rhino
+    "shelljs"       : false,    // ShellJS
+    "typed"         : false,    // Globals for typed array constructions
+    "worker"        : false,    // Web Workers
+    "wsh"           : false,    // Windows Scripting Host
+    "yui"           : false,    // Yahoo User Interface
+    "globals"       : {
+        "require": true,
+        "Package": true         // Meteor Package definition
+    }
+}
@@ -1,81 +0,0 @@
-#!/bin/bash
-
-# Set directory to location of this script
-# https://stackoverflow.com/a/3355423/1867984
-cd "$(dirname "$0")"
-
-# Helpful to verify which versions we're using
-yarn -v
-node -v
-
-# Install GitBook CLI
-echo 'Installing Gitbook CLI'
-yarn global add gitbook-cli
-npm install -g gitbook-cli
-
-echo 'Running Gitbook installation'
-# Generate all version's GitBook output
-# For each directory in /docs ...
-cd ./../docs/
-for D in *; do
-    if [ -d "${D}" ]; then
-
-			echo "Generating output for: ${D}"
-			cd "${D}"
-
-			# Clear previous output, generate new
-			rm -rf _book
-			node /opt/buildhome/.nvm/versions/node/v10.16.0/lib/node_modules/gitbook-cli/bin/gitbook.js install
-			node /opt/buildhome/.nvm/versions/node/v10.16.0/lib/node_modules/gitbook-cli/bin/gitbook.js build
-			cd ..
-
-		fi
-done
-
-# Move CNAME File into `latest`
-cp CNAME ./latest/_book/CNAME
-
-# Create a history folder in our latest version's output
-mkdir ./latest/_book/history
-
-# Move each version's files to latest's history folder
-for D in *; do
-  # If it's a directory
-	if [ -d "${D}" ]; then
-	  # If the directory name starts with `v` (v1, v2, etc.)
-		if [ "${D}" == v* ] ; then
-
-			echo "Moving ${D} to the latest version's history folder"
-
-			mkdir "./latest/_book/history/${D}"
-			cp -v -r "./${D}/_book"/* "./latest/_book/history/${D}"
-
-		fi
-	fi
-done
-cd ..
-
-# Build and copy the PWA Viewer into the demo directory
-mkdir ./docs/latest/_book/demo/
-
-# Install build deps and all monorepo package dependencies. Yarn Workspaces
-# should also symlink all projects appropriately
-yarn install --no-ignore-optional --pure-lockfile
-
-# Navigate to our Viewer project
-cd ./platform/viewer/
-
-# Create a Versions File
-# node -p -e '"export default "' + require(\"./../package.json\").version + '";"' > src/version.js
-yarn run version
-# Copy over wado-image-loader codecs and worker file
-cp ./../../node_modules/cornerstone-wado-image-loader/dist/*.min.js* public -v
-# Build using react-scripts
-# npx cross-env PUBLIC_URL=/demo REACT_APP_CONFIG=config/netlify.js react-scripts --max_old_space_size=4096 build
-# Build using WebPack
-# TODO: consume public/config correctly instead of hardcode
-npx webpack --config config/webpack.prod.js --mode production --env.production
-# Copy output to the folder that is our publish target
-npx cpx "dist/**/*" ./../../docs/latest/_book/demo --verbose
-
-echo 'Nothing left to see here. Go home, folks.'
@@ -0,0 +1,9 @@
+{
+  "trailingComma": "es5",
+  "printWidth": 80,
+  "proseWrap": "always",
+  "tabWidth": 2,
+  "semi": true,
+  "singleQuote": true,
+  "endOfLine": "lf"
+}
@@ -1,30 +1,30 @@
 {
-  "editor.rulers": [80, 120],
-
-  // ===
-  // Spacing
-  // ===
-
-  "editor.insertSpaces": true,
-  "editor.tabSize": 2,
-  "editor.trimAutoWhitespace": true,
-  "files.trimTrailingWhitespace": true,
-  "files.eol": "\n",
-  "files.insertFinalNewline": true,
-  "files.trimFinalNewlines": true,
-
-  // ===
-  // Event Triggers
-  // ===
-
-  "editor.formatOnSave": true,
-  "eslint.autoFixOnSave": true,
-  "eslint.run": "onSave",
-  "eslint.validate": [
-    { "language": "javascript", "autoFix": true },
-    { "language": "javascriptreact", "autoFix": true }
-  ],
-  "prettier.disableLanguages": [],
-  "prettier.endOfLine": "lf",
-  "workbench.colorCustomizations": {}
-}
+    "editor.rulers": [80, 120],
+  
+    // ===
+    // Spacing
+    // ===
+  
+    "editor.insertSpaces": true,
+    "editor.tabSize": 2,
+    "editor.trimAutoWhitespace": true,
+    "files.trimTrailingWhitespace": true,
+    "files.eol": "\n",
+    "files.insertFinalNewline": true,
+    "files.trimFinalNewlines": true,
+  
+    // ===
+    // Event Triggers
+    // ===
+  
+    "editor.formatOnSave": true,
+    "eslint.autoFixOnSave": true,
+    "eslint.run": "onSave",
+    "eslint.validate": [
+      { "language": "javascript", "autoFix": true },
+      { "language": "javascriptreact", "autoFix": true }
+    ],
+    "prettier.disableLanguages": [],
+    "prettier.endOfLine": "lf"
+  }
+  
@@ -1,90 +0,0 @@
-const path = require("path");
-const ExtractCssChunks = require("extract-css-chunks-webpack-plugin");
-
-const SRC_DIR = path.join(__dirname, "../src");
-const PUBLIC_DIR = path.join(__dirname, "../public");
-const DIST_DIR = path.join(__dirname, "../dist");
-
-module.exports = (env, argv, { SRC_DIR, DIST_DIR }) => {
-  return {
-    entry: {
-      app: `${SRC_DIR}/index.js`
-    },
-    context: SRC_DIR,
-    module: {
-      rules: [
-        {
-          test: /\.jsx?$/,
-          exclude: [/node_modules/, /packages\\extension/],
-          loader: "babel-loader",
-          options: {
-            // Find babel.config.js in monorepo root
-            // https://babeljs.io/docs/en/options#rootmode
-            rootMode: "upward",
-            presets: [
-              [
-                "@babel/preset-env",
-                {
-                  // Do not transform ES6 modules to another format.
-                  // Webpack will take care of that.
-                  modules: false
-                }
-              ]
-            ]
-          }
-        },
-        {
-          test: /\.css$/,
-          use: [
-            "style-loader",
-            ExtractCssChunks.loader,
-            { loader: "css-loader", options: { importLoaders: 1 } },
-            {
-              loader: "postcss-loader",
-              options: {
-                config: {
-                  path: "./postcss.config.js"
-                }
-              }
-            }
-          ]
-        },
-        /**
-         * This allows us to include web workers in our bundle, and VTK.js
-         * web workers in our bundle. While this increases bundle size, it
-         * cuts down on the number of includes we need for `script tag` usage.
-         */
-        {
-          test: /\.worker\.js$/,
-          include: /vtk\.js[\/\\]Sources/,
-          use: [
-            {
-              loader: "worker-loader",
-              options: { inline: true, fallback: false }
-            }
-          ]
-        },
-        /**
-         * This is exclusively used by `vtk.js` to bundle glsl files.
-         */
-        {
-          test: /\.glsl$/i,
-          include: /vtk\.js[\/\\]Sources/,
-          loader: "shader-loader"
-        }
-      ]
-    },
-    resolve: {
-      // Which directories to search when resolving modules
-      modules: [
-        path.resolve(__dirname, "../node_modules"),
-        path.resolve(__dirname, "../../../node_modules"),
-        SRC_DIR
-      ],
-      // Attempt to resolve these extensions in order.
-      extensions: [".js", ".jsx", ".json", "*"],
-      // symlinked resources are resolved to their real path, not their symlinked location
-      symlinks: true
-    }
-  };
-};
@@ -27,22 +27,34 @@ FROM node:11.2.0-slim as builder
 RUN mkdir /usr/src/app
 WORKDIR /usr/src/app

-ENV PATH /usr/src/app/node_modules/.bin:$PATH
-ENV GENERATE_SOURCEMAP=false
-
 COPY package.json /usr/src/app/package.json
 COPY yarn.lock /usr/src/app/yarn.lock

-ADD . /usr/src/app/
+# Run the install before copying the rest of the files
 RUN yarn install
+
+ENV PATH /usr/src/app/node_modules/.bin:$PATH
+ENV GENERATE_SOURCEMAP=false
+ENV REACT_APP_CONFIG=config/default.js
+
+# White list instead of copying the whole directory
+COPY src /usr/src/app/src
+COPY public /usr/src/app/public
+COPY .babelrc /usr/src/app/.babelrc
+COPY .eslintrc /usr/src/app/.eslintrc
+
 RUN yarn run build:web

 # Stage 2: Bundle the built application into a Docker container
 # which runs Nginx using Alpine Linux
 FROM nginx:1.15.5-alpine
+RUN apk add --no-cache bash
 RUN rm -rf /etc/nginx/conf.d
 COPY docker/Viewer-v2.x /etc/nginx/conf.d
+COPY docker/Viewer-v2.x/entrypoint.sh /usr/src/
+RUN chmod 777 /usr/src/entrypoint.sh
 COPY --from=builder /usr/src/app/build /usr/share/nginx/html
 EXPOSE 80
 EXPOSE 443
+ENTRYPOINT ["/usr/src/entrypoint.sh"]
 CMD ["nginx", "-g", "daemon off;"]
@@ -1,148 +1,295 @@
-# OHIF Medical Imaging Platform
+<!-- prettier-ignore-start -->
+<!-- markdownlint-disable -->
+<div align="center">
+  <h1>ohif-viewer</h1>
+  <p><strong>ohif-viewer</strong> is a zero-footprint medical image viewer provided by the <a href="http://ohif.org/">Open Health Imaging Foundation (OHIF)</a>. It is a configurable and extensible progressive web application with out-of-the-box support for image archives which support <a href="https://www.dicomstandard.org/dicomweb/">DICOMweb</a>.</p>
+</div>

-[![lerna][lerna-image]][lerna-url]
-[![Netlify Status][netlify-image]][netlify-url]

-## The Problem
+<div align="center">
+  <a href="https://docs.ohif.org/"><strong>Read The Docs</strong></a> |
+  <a href="https://github.com/OHIF/Viewers/tree/master/docs/latest">Edit the docs</a>
+</div>
+<div align="center">
+  <a href="https://docs.ohif.org/demo">Demo</a> |
+  <a href="https://ohif.canny.io/">Roadmap</a> |
+  <a href="https://react.ohif.org/">Component Library</a>
+</div>

-...

-## Why Choose Us
+<hr />

-...
+[![CircleCI][circleci-image]][circleci-url]
+[![codecov][codecov-image]][codecov-url]
+[![All Contributors](https://img.shields.io/badge/all_contributors-9-orange.svg?style=flat-square)](#contributors)
+[![code style: prettier][prettier-image]][prettier-url]
+[![semantic-release][semantic-image]][semantic-url]

-## Quick Start
+[![NPM version][npm-version-image]][npm-url]
+[![NPM downloads][npm-downloads-image]][npm-url]
+[![Pulls][docker-pulls-img]][docker-image-url]
+[![MIT License][license-image]][license-url]
+<!-- markdownlint-enable -->
+<!-- prettier-ignore-end -->

-...
+> ATTENTION: If you are looking for Version 1 (the Meteor Version) of this
+> repository, it lives on
+> [the `v1.x` branch](https://github.com/OHIF/Viewers/tree/v1.x)

-## Commands
+## Why?

-### Global
+Building a web based medical imaging viewer from scratch is time intensive, hard
+to get right, and expensive. Instead of re-inventing the wheel, you can use the
+OHIF Viewer as a rock solid platform to build on top of. The Viewer is a
+[React][react-url] [Progressive Web Application][pwa-url] that can be embedded
+in existing applications via it's [packaged source
+(ohif-viewer)][ohif-viewer-url] or hosted stand-alone. The Viewer exposes
+[configuration][configuration-url] and [extensions][extensions-url] to support
+workflow customization and advanced functionality at common integration points.

-| Commands        |     |                                                       |
-| --------------- | --- | ----------------------------------------------------- |
-| `build:package` |     | Builds commonjs bundles for all projects              |
-| `test:unit`     |     | Jest multi-project test runner; overall coverage      |
-| `test:unit:ci`  |     | Runs tests in parallel. Reports coverage per project. |
+If you're interested in using the OHIF Viewer, but you're not sure it supports
+your use case [check out our docs](https://docs.ohif.org/). Still not sure, or
+you would like to propose new features? Don't hesitate to
+[create an issue](https://github.com/OHIF/Viewers/issues) or open a pull
+request.

-### Local
+## Getting Started

-| Commands       |     |                                                   |
-| -------------- | --- | ------------------------------------------------- |
-| `test:unit`    |     | Runs tests while watching for changes             |
-| `test:unit:ci` |     | Runs tests, collects coverage, reports to codecov |
+This readme is specific to testing and developing locally. If you're more
+interested in production deployment strategies,
+[you can check out our documentation on publishing](https://docs.ohif.org/).

-## Developing
+Want to play around before you dig in?
+[Check out our LIVE Demo](https://viewer.ohif.org/)

-The OHIF Medical Image Viewing Platform is maintained as a
-[`monorepo`][monorepo]. This means that this repository, instead of containing a
-single project, contains many projects. If you explore our project structure,
-you'll see the following:
+### Setup

-```bash
-.
-├── extensions              #
-│   ├── _example            # Skeleton of example extension
-│   ├── cornerstone         # 2D images w/ Cornerstone.js
-│   ├── dicom-html          # Structured Reports as HTML in viewport
-│   ├── dicom-microscopy    # Whole slide microscopy viewing
-│   ├── dicom-pdf           # View DICOM wrapped PDFs in viewport
-│   └── vtk                 # MPR and Volume support w/ VTK.js
-│
-├── platform                #
-│   ├── core                # Business Logic
-│   ├── i18n                # Internationalization Support
-│   ├── ui                  # React component library
-│   └── viewer              # Connects platform and extension projects
-│
-├── ...                     # misc. shared configuration
-├── lerna.json              # MonoRepo (Lerna) settings
-├── package.json            # Shared devDependencies and commands
-└── README.md               # This file
+_Requirements:_
+
+- [NodeJS & NPM](https://nodejs.org/en/download/)
+- [Yarn](https://yarnpkg.com/lang/en/docs/install/)
+
+_Steps:_
+
+1. Fork this repository
+2. Clone your forked repository (your `origin`)
+
+- `git clone git@github.com:YOUR_GITHUB_USERNAME/Viewers.git`
+
+3. Add `OHIF/Viewers` as a `remote` repository (the `upstream`)
+
+- `git remote add upstream git@github.com:OHIF/Viewers.git`
+
+### Developing Locally
+
+In your cloned repository's root folder, run:
+
+```js
+// Restore dependencies
+yarn install
+
+// Stands up local server to host Viewer.
+// Viewer connects to our public cloud PACS by default
+yarn start
 ```

-Want to better understand why and how we've structured this repository? Read
-more about it in our [Architecture Documentation](#todo).
+For more advanced local development scenarios, like using your own locally
+hosted PACS and test data,
+[check out our Essential: Getting Started](https://docs.ohif.org/essentials/getting-started.html)
+guide.

-### Requirements
+### E2E Tests

- [Yarn 1.17.3+](https://yarnpkg.com/en/docs/install)
- [Node 8+](https://nodejs.org/en/)
- Yarn Workspaces should be enabled on your machine:
-  - `yarn config set workspaces-experimental true`
+Using [Cypress](https://www.cypress.io/) to create End-to-End tests and check whether the application flow is performing correctly, ensuring that the integrated components are working as expected.

-### Getting Started
+#### Why Cypress?

-1. [Fork this repository][how-to-fork]
-2. [Clone your forked repository][how-to-clone]
-   - `git clone https://github.com/YOUR-USERNAME/Viewers.git`
-3. Navigate to the cloned project's directory
-4. Add this repo as a `remote` named `upstream`
-   - `git remote add upstream https://github.com/OHIF/Viewers.git`
-5. `yarn install` to restore dependencies and link projects
+Cypress is a next generation front end testing tool built for the modern web.
+With Cypress is easy to set up, write, run and debug tests

-#### To Develop
+It allow us to write different types of tests:

-```bash
-# Force install
-yarn install --force
+- End-to-End tests
+- Integration tests
+- Unit tets

-# Link
-# Redundent with yarn workspaces
-npx lerna bootstrap
+All tests must be in `./cypress/integration` folder.
+
+Commands to run the tests:
+
+```js
+// Open Cypress Dashboard that provides insight into what happened when your tests ran
+yarn run cy
+
+// Run all tests using Electron browser headless
+yarn run cy:run
+
+// Run all tests in CI mode
+yarn run cy:run:ci
 ```

-```bash
-# Link for local dev
-cd ./extensions/my-package
-npx lerna add @ohif/my-package --scope=@ohif/my-package-consumer
+### Contributing
+
+> Large portions of the Viewer's functionality are maintained in other
+> repositories. To get a better understanding of the Viewer's architecture and
+> "where things live", read
+> [our docs on the Viewer's architecture](https://docs.ohif.org/advanced/architecture.html#diagram)
+
+It is notoriously difficult to setup multiple dependent repositories for
+end-to-end testing and development. That's why we recommend writing and running
+unit tests when adding and modifying features. This allows us to program in
+isolation without a complex setup, and has the added benefit of producing
+well-tested business logic.
+
+1. Clone this repository
+2. Navigate to the project directory, and `yarn install`
+3. To begin making changes, `yarn run dev`
+4. To commit changes, run `yarn run cm`
+
+When creating tests, place the test file "next to" the file you're testing.
+[For example](https://github.com/OHIF/Viewers/blob/master/src/utils/index.test.js):
+
+```js
+// File
+index.js
+
+// Test for file
+index.test.js
 ```

-```bash
-# Add shared dev dependency for workspace
-yarn add --dev -W package-name
-```
+As you add and modify code, `jest` will watch for uncommitted changes and run
+your tests, reporting the results to your terminal. Make a pull request with
+your changes to `master`, and a core team member will review your work. If you
+have any questions, please don't hesitate to reach out via a GitHub issue.

-// module vs main vs jsnext:main vs browser
-https://babeljs.io/blog/2018/06/26/on-consuming-and-publishing-es2015+-packages
+## Issues

-Webpack: https://webpack.js.org/configuration/resolve/
+_Looking to contribute? Look for the [Good First Issue][good-first-issue]
+label._

-UMD builds go through
+### 🐛 Bugs

- index.umd.js
- Extensions passed in via window config
+Please file an issue for bugs, missing documentation, or unexpected behavior.

-PWA builds go through
+[**See Bugs**][bugs]

- index.js
- Extensions specified in file or by window config
+### 💡 Feature Requests

-> The module property should point to a script that utilizes ES2015 module
-> syntax but no other syntax features that aren't yet supported by browsers or
-> node. This enables webpack to parse the module syntax itself, allowing for
-> lighter bundles via tree shaking if users are only consuming certain parts of
-> the library.
+Please file an issue to suggest new features. Vote on feature requests by adding
+a 👍. This helps maintainers prioritize what to work on.

-## Notes
+[**See Feature Requests**][requests-feature]

-Lerna requires `GH_TOKEN` for GitHub authentication token
-`git remote update` 1st call, need to verify host key
+### ❓ Questions
+
+For questions related to using the library, please visit our support community,
+or file an issue on GitHub.
+
+[Google Group][google-group]
+
+## Roadmap
+
+If you want to know what's planned for the very near future,
+[check out our roadmap](https://ohif.canny.io/). The best way to influence when
+and what is worked on is to contribute to the conversation by creating GitHub
+issues, and contributing code through pull requests. OHIF's high level
+priorities for the near future are:
+
+- Feature parity with version 1
+- Extension and configuration improvements with key integration partners
+- Continued Developer Experience Improvements
+- Segmentation Tools, and improved VTK.js support
+
+More granular information will make it's way to the backlog as these items
+become scoped for development by core maintainers.
+
+> Don't hesitate to ask questions, propose features, or create pull requests.
+> We're here, we're listening, and we're ready to build the best open source
+> medical imaging viewer on the web.
+
+#### Roadmap Generously Powered by Canny.io
+
+<a href="https://ohif.canny.io/">
+  <img height="30" src="docs/latest/assets/img/canny-full.png" />
+</a>
+
+## Contributors
+
+Thanks goes to these wonderful people
+([emoji key](https://allcontributors.org/docs/en/emoji-key)):
+
+<!-- ALL-CONTRIBUTORS-LIST:START - Do not remove or modify this section -->
+<!-- prettier-ignore -->
+<table><tr><td align="center"><a href="https://github.com/swederik"><img src="https://avatars3.githubusercontent.com/u/607793?v=4" width="100px;" alt="Erik Ziegler"/><br /><sub><b>Erik Ziegler</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=swederik" title="Code">💻</a> <a href="#infra-swederik" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a></td><td align="center"><a href="https://github.com/evren217"><img src="https://avatars1.githubusercontent.com/u/4920551?v=4" width="100px;" alt="Evren Ozkan"/><br /><sub><b>Evren Ozkan</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=evren217" title="Code">💻</a></td><td align="center"><a href="https://github.com/galelis"><img src="https://avatars3.githubusercontent.com/u/2378326?v=4" width="100px;" alt="Gustavo André Lelis"/><br /><sub><b>Gustavo André Lelis</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=galelis" title="Code">💻</a></td><td align="center"><a href="http://dannyrb.com/"><img src="https://avatars1.githubusercontent.com/u/5797588?v=4" width="100px;" alt="Danny Brown"/><br /><sub><b>Danny Brown</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=dannyrb" title="Code">💻</a> <a href="#infra-dannyrb" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a></td><td align="center"><a href="https://github.com/all-contributors/all-contributors-bot"><img src="https://avatars3.githubusercontent.com/u/46843839?v=4" width="100px;" alt="allcontributors[bot]"/><br /><sub><b>allcontributors[bot]</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=allcontributors" title="Documentation">📖</a></td><td align="center"><a href="https://www.linkedin.com/in/siliconvalleynextgeneration/"><img src="https://avatars0.githubusercontent.com/u/1230575?v=4" width="100px;" alt="Esref Durna"/><br /><sub><b>Esref Durna</b></sub></a><br /><a href="#question-EsrefDurna" title="Answering Questions">💬</a></td><td align="center"><a href="https://github.com/diego0020"><img src="https://avatars3.githubusercontent.com/u/7297450?v=4" width="100px;" alt="diego0020"/><br /><sub><b>diego0020</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=diego0020" title="Code">💻</a></td></tr><tr><td align="center"><a href="https://github.com/dlwire"><img src="https://avatars3.githubusercontent.com/u/1167291?v=4" width="100px;" alt="David Wire"/><br /><sub><b>David Wire</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=dlwire" title="Code">💻</a></td><td align="center"><a href="https://github.com/jfmedeiros1820"><img src="https://avatars1.githubusercontent.com/u/2211708?v=4" width="100px;" alt="João Felipe de Medeiros Moreira"/><br /><sub><b>João Felipe de Medeiros Moreira</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=jfmedeiros1820" title="Tests">⚠️</a></td></tr></table>
+
+<!-- ALL-CONTRIBUTORS-LIST:END -->
+
+This project follows the
+[all-contributors](https://github.com/all-contributors/all-contributors)
+specification. Contributions of any kind welcome!
+
+## License
+
+MIT © [OHIF](https://github.com/OHIF)
+
+## Acknowledgments
+
+To acknowledge the OHIF Viewer in an academic publication, please cite
+
+> _LesionTracker: Extensible Open-Source Zero-Footprint Web Viewer for Cancer
+> Imaging Research and Clinical Trials_
+>
+> Trinity Urban, Erik Ziegler, Rob Lewis, Chris Hafey, Cheryl Sadow, Annick D.
+> Van den Abbeele and Gordon J. Harris
+>
+> _Cancer Research_, November 1 2017 (77) (21) e119-e122 DOI:
+> [10.1158/0008-5472.CAN-17-0334](https://www.doi.org/10.1158/0008-5472.CAN-17-0334)
+
+**Note:** If you use or find this repository helpful, please take the time to
+star this repository on Github. This is an easy way for us to assess adoption
+and it can help us obtain future funding for the project.
+
+This work is supported primarily by the National Institutes of Health, National
+Cancer Institute, Informatics Technology for Cancer Research (ITCR) program,
+under a
+[grant to Dr. Gordon Harris at Massachusetts General Hospital (U24 CA199460)](https://projectreporter.nih.gov/project_info_description.cfm?aid=8971104).

 <!--
-  Links
-  -->
+Links:
+-->

 <!-- prettier-ignore-start -->
-<!-- Badges -->
-[lerna-image]: https://img.shields.io/badge/maintained%20with-lerna-cc00ff.svg
-[lerna-url]: https://lerna.js.org/
-[netlify-image]: https://api.netlify.com/api/v1/badges/a5d369ab-18a6-41c3-bcde-83805205ac7f/deploy-status
-[netlify-url]: https://app.netlify.com/sites/ohif/deploys
-<!-- Links -->
-[monorepo]: https://en.wikipedia.org/wiki/Monorepo
-[how-to-fork]: https://help.github.com/en/articles/fork-a-repo
-[how-to-clone]: https://help.github.com/en/articles/fork-a-repo#step-2-create-a-local-clone-of-your-fork
-
+<!-- ROW -->
+[all-contributors-image]: https://img.shields.io/badge/all_contributors-0-orange.svg?style=flat-square
+[contributing-url]: https://github.com/OHIF/Viewers/blob/react/CONTRIBUTING.md
+[circleci-image]: https://circleci.com/gh/OHIF/Viewers.svg?style=svg
+[circleci-url]: https://circleci.com/gh/OHIF/Viewers
+[codecov-image]: https://codecov.io/gh/OHIF/Viewers/branch/react/graph/badge.svg
+[codecov-url]: https://codecov.io/gh/OHIF/Viewers/branch/react
+[prettier-image]: https://img.shields.io/badge/code_style-prettier-ff69b4.svg?style=flat-square
+[prettier-url]: https://github.com/prettier/prettier
+[semantic-image]: https://img.shields.io/badge/%20%20%F0%9F%93%A6%F0%9F%9A%80-semantic--release-e10079.svg
+[semantic-url]: https://github.com/semantic-release/semantic-release
+<!-- ROW -->
+[npm-url]: https://npmjs.org/package/ohif-viewer
+[npm-downloads-image]: https://img.shields.io/npm/dm/ohif-viewer.svg?style=flat-square
+[npm-version-image]: https://img.shields.io/npm/v/ohif-viewer.svg?style=flat-square
+[docker-pulls-img]: https://img.shields.io/docker/pulls/ohif/viewer.svg?style=flat-square
+[docker-image-url]: https://hub.docker.com/r/ohif/viewer
+[license-image]: https://img.shields.io/badge/license-MIT-blue.svg?style=flat-square
+[license-url]: LICENSE
+<!-- DOCS -->
+[react-url]: https://reactjs.org/
+[pwa-url]: https://developers.google.com/web/progressive-web-apps/
+[ohif-viewer-url]: https://www.npmjs.com/package/ohif-viewer
+[configuration-url]: https://docs.ohif.org/essentials/configuration.html
+[extensions-url]: https://docs.ohif.org/advanced/extensions.html
+<!-- Misc. -->
+[react-viewer]: https://github.com/OHIF/Viewers/tree/react
+<!-- Issue Boilerplate -->
+[bugs]: https://github.com/OHIF/Viewers/labels/bug
+[requests-feature]: https://github.com/OHIF/Viewers/labels/enhancement
+[good-first-issue]: https://github.com/OHIF/Viewers/labels/good%20first%20issue
+[google-group]: https://groups.google.com/forum/#!forum/cornerstone-platform

 <!-- prettier-ignore-end -->
@@ -1,8 +0,0 @@
-/* Used by webpack, babel and eslint */
-
-const path = require('path');
-
-module.exports = {
-  '@codinsky/parse-js': path.resolve(__dirname, 'packages/parse/src'),
-  '@codinsky/curate': path.resolve(__dirname, 'packages/curate/src'),
-};
@@ -1,50 +0,0 @@
-const aliases = require("./aliases.config");
-const path = require("path");
-
-module.exports = {
-  // https://babeljs.io/docs/en/options#babelrcroots
-  presets: [
-    [
-      "@babel/preset-env",
-      {
-        targets: {
-          ie: "11"
-        }
-      }
-    ],
-    "@babel/preset-react"
-  ],
-  babelrcRoots: ["./platform/*", "./extensions/*"],
-  plugins: [
-    "inline-react-svg",
-    "@babel/plugin-proposal-class-properties",
-    "@babel/plugin-proposal-object-rest-spread",
-    "@babel/plugin-syntax-dynamic-import",
-    "@babel/plugin-transform-regenerator",
-    "@babel/plugin-transform-runtime",
-    [
-      "module-resolver",
-      {
-        // https://github.com/tleunen/babel-plugin-module-resolver/issues/338
-        // There seem to be a bug with module-resolver with a mono-repo setup:
-        // It doesn't resolve paths correctly when using root/alias combo, so we
-        // use this function instead.
-        resolvePath(sourcePath, currentFile, opts) {
-          // This will return undefined if aliases has no key for the sourcePath,
-          // in which case module-resolver will fallback on its default behaviour.
-          return aliases[sourcePath];
-        }
-      }
-    ]
-  ],
-  env: {
-    debug: {
-      sourceMaps: "inline",
-      retainLines: true
-    },
-    build: {
-      ignore: ["**/*.test.jsx", "**/*.test.js", "__snapshots__", "__tests__"]
-    }
-  }
-  // ignore: ["node_modules"]
-};
@@ -0,0 +1,77 @@
+<!DOCTYPE html>
+<html lang="en">
+
+<head>
+  <meta charset="utf-8" />
+
+  <meta name="description" content="Open Health Imaging Foundation DICOM Viewer" />
+  <meta name="viewport"
+    content="width=device-width,initial-scale=1.0,minimum-scale=1,maximum-scale=1,user-scalable=no" />
+  <meta name="theme-color" content="#000000" />
+  <meta http-equiv="cleartype" content="on" />
+  <meta name="MobileOptimized" content="320" />
+  <meta name="HandheldFriendly" content="True" />
+  <meta name="apple-mobile-web-app-capable" content="yes" />
+
+  <!-- Latest compiled and minified CSS -->
+  <link rel="stylesheet" href="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/css/bootstrap.min.css"
+    integrity="sha384-BVYiiSIFeK1dGmJRAkycuHAHRg32OmUcww7on3RYdg4Va+PmSTsz/K68vbdEjh4u" crossorigin="anonymous" />
+
+  <link rel="stylesheet" href="https://use.fontawesome.com/releases/v5.7.2/css/all.css"
+    integrity="sha384-fnmOCqbTlWIlj8LyTjo7mOUStjsKC4pOpQbqyi7RrhN7udi9RwhKkMHpvLbHG9Sr" crossorigin="anonymous" />
+
+  <title>OHIF Standalone Viewer</title>
+</head>
+
+<body>
+  <noscript> You need to enable JavaScript to run this app. </noscript>
+
+  <div id="root"></div>
+
+  <!-- Load React. -->
+  <script crossorigin src="https://unpkg.com/react@16/umd/react.production.min.js"></script>
+  <script crossorigin src="https://unpkg.com/react-dom@16/umd/react-dom.production.min.js"></script>
+  <script>
+    // Workaround to deal with react-router-dom complaining
+    // if process.env is not defined. Must be run before
+    // ohif-viewer package is included.
+    "use strict";
+
+    var process = {
+      env: {
+        NODE_ENV: "production"
+      }
+    };
+
+    window.process = process;
+    window.config = {
+      // default: '/'
+      routerBasename: '/',
+      // default: ''
+      relativeWebWorkerScriptsPath: '',
+      servers: {
+        dicomWeb: [
+          {
+            name: 'DCM4CHEE',
+            wadoUriRoot: 'https://server.dcmjs.org/dcm4chee-arc/aets/DCM4CHEE/wado',
+            qidoRoot: 'https://server.dcmjs.org/dcm4chee-arc/aets/DCM4CHEE/rs',
+            wadoRoot: 'https://server.dcmjs.org/dcm4chee-arc/aets/DCM4CHEE/rs',
+            qidoSupportsIncludeField: true,
+            imageRendering: 'wadors',
+            thumbnailRendering: 'wadors',
+          },
+        ],
+      },
+    }
+  </script>
+
+  <script src="/dist/index.umd.js" crossorigin></script>
+  <script>
+    var Viewer = window.OHIFStandaloneViewer.App;
+    var app = React.createElement(Viewer, window.config, null);
+
+    ReactDOM.render(app, document.getElementById("root"));
+  </script>
+</body>
+
+</html>
@@ -0,0 +1,19 @@
+#!/bin/bash
+
+# If CLIENT_ID is specified, use the google.js configuration with the modified ID
+if [ ! -z "$CLIENT_ID" ]
+  then
+  	echo "Google Cloud Healthcare $CLIENT_ID has been provided: "
+  	echo $CLIENT_ID
+  	echo "Updating config..."
+
+  	# - Use SED to replace the CLIENT_ID that is currently in public/config/google.js
+	sed -i -e "s/YOURCLIENTID.apps.googleusercontent.com/$CLIENT_ID/g" /usr/share/nginx/html/config/google.js
+
+	# - Copy public/config/google.js to overwrite public/config/default.js
+	cp /usr/share/nginx/html/config/google.js /usr/share/nginx/html/config/default.js
+fi
+
+echo "Starting Nginx to serve the OHIF Viewer..."
+
+exec "$@"
@@ -12,13 +12,17 @@ architected, and the role each of it's dependent libraries plays.

 ## Overview

-The [`OHIF/Viewers`][viewers-project] project contains the source code for the
-OHIF Medical Imaging Viewer. It is effectively a React [progressive web
-app][pwa] (PWA) that combines the business logic housed in
-[`OHIF/ohif-core`][core] and the components in our React Component library
-[`OHIF/react-viewerbase`][component-library]. It provides customization for
-common use cases through [configuration][configuration] and for adding
-functionality via [extensions][extensions].
+The [`OHIF/Viewers`](https://github.com/OHIF/Viewers/tree/react) repository
+contains the source code for the OHIF Medical Imaging Viewer. It is effectively
+a React
+[progressive web app](https://developers.google.com/web/progressive-web-apps/)
+(PWA) that combines the business logic housed in
+[`OHIF/ohif-core`](https://github.com/OHIF/ohif-core) and the components in our
+React Component library
+[`OHIF/react-viewerbase`](https://github.com/OHIF/react-viewerbase). It provides
+customization for common use cases through
+[configuration](../essentials/configuration.md) and for adding functionality via
+[extensions](./extensions.md).

 ### Business Logic

@@ -67,13 +71,13 @@ looking for ways to improve our extensibility ^\_^

 This diagram is a conceptual illustration of how the Viewer is architected.

-1. (optional) `extensions` can be registered with `ohif-core`'s extension
+0. (optional) `extensions` can be registered with `ohif-core`'s extension
   manager
-2. `ohif-core` provides bussiness logic and a way for `viewer` to access
+1. `ohif-core` provides bussiness logic and a way for `viewer` to access
   registered extensions
-3. The `viewer` composes and provides data to components from our component
+1. The `viewer` composes and provides data to components from our component
   library (`react-viewerbase`)
-4. The `viewer` can be built and served as a stand-alone PWA, or as an
+1. The `viewer` can be built and served as a stand-alone PWA, or as an
   embeddable package
   ([`ohif-viewer`](https://www.npmjs.com/package/ohif-viewer))

@@ -94,16 +98,3 @@ You can, but you will not be able to leverage as much of the existing code and
 components. `ohif-core` could still be used for business logic, and to provide a
 model for extensions. `react-viewerbase` would then become a guide for the
 components you would need to recreate.
-
-<!--
-  Links
-  -->
-
-<!-- prettier-ignore-start -->
-[viewers-project]: https://github.com/OHIF/Viewers
-[pwa]: https://developers.google.com/web/progressive-web-apps/
-[core]: https://github.com/OHIF/ohif-core
-[component-library]: https://github.com/OHIF/react-viewerbase
-[configuration]: ../essentials/configuration.md
-[extensions]: ./extensions.m
-<!-- prettier-ignore-end -->
@@ -1,23 +0,0 @@
-# MonoRepos: A Crash Course
-
- [Lerna][lerna]
-
-Solutions:
-
-## Semantic-Release
-
- [Semantic-Release](https://github.com/semantic-release/semantic-release/issues/193#issuecomment-462063871)
- [Multi-semantic-release](https://github.com/dhoulb/multi-semantic-release)
- [semantic-release-monorepo](https://github.com/Updater/semantic-release-monorepo)
-
-# Netlify
-
- https://community.netlify.com/t/best-practices-for-deploying-sites-from-monorepos/818
-
-<!--
-  Links
-  -->
-
-<!-- prettier-ignore-start -->
-[lerna]: https://github.com/lerna/lerna
-<!-- prettier-ignore-end -->
@@ -1,11 +1,5 @@
 # Google Cloud Healthcare

-> ATTENTION: The original documentation for this integration lives in the legacy
-> `version 1` Meteor documentation. You can
-> [find it here](/history/v1/connecting-to-image-archives/google-cloud-healthcare.html).
-> These docs will mirror the Meteor documentation until our `React`
-> implementation has been updated to work with Google Cloud Healthcare.
-
 > The [Google Cloud Healthcare API](https://cloud.google.com/healthcare/) is a
 > powerful option for storing medical imaging data in the cloud.

@@ -16,10 +10,7 @@ store their data in the cloud. It offers an
 [almost-entirely complete DICOMWeb API](https://cloud.google.com/healthcare/docs/dicom)
 which requires tokens generated via the
 [OAuth 2.0 Sign In flow](https://developers.google.com/identity/sign-in/web/sign-in).
-Images can even be transcoded on the fly if this is desired. The Cloud
-Healthcare API is a very attractive option because it allows us to avoid
-deploying the Meteor server entirely. We can just deploy OHIF as a client-only
-static site application.
+Images can even be transcoded on the fly if this is desired.

 ## Setup a Google Cloud Healthcare Project

@@ -55,70 +46,26 @@ static site application.

 ## Run the viewer with your OAuth Client ID

-1. Open the `config/oidc-googleCloud.json` file and change `YOURCLIENTID` to
+1. Open the `config/google.js` file and change `YOURCLIENTID` to
   your Client ID value.
-1. Run the OHIF Viewer using the oidc-googleCloud.json configuration file
+1. Run the OHIF Viewer using the config/google.js configuration file

 ```bash
 cd OHIFViewer
-METEOR_PACKAGE_DIRS="../Packages" meteor npm install
-METEOR_PACKAGE_DIRS="../Packages" meteor --settings ../config/oidc-googleCloud.json
+yarn install
+REACT_APP_CONFIG=config/google.js yarn run dev
 ```

 ## Running via Docker

-OHIF is also providing a Docker container which can connect to Google Cloud
-Healthcare with a Client ID which is provided at runtime. This is a very simple
-method to get up and running. Internally, the container is running
-[Nginx](https://nginx.org/) to serve the
-[Standalone Viewer](../standalone-viewer/usage.md).
+The OHIF Viewer Docker container can be connected to Google Cloud
+Healthcare by providing a Client ID at runtime. This is a very simple
+method to get up and running.

 1. Install Docker (https://www.docker.com/)
 1. Run the Docker container, providing a Client ID as an environment variable.
   Client IDs look like `xyz.apps.googleusercontent.com`.

 ```bash
-docker run --env CLIENT_ID=$CLIENT_ID --publish 3000:80 ohif/viewer-google-cloud:latest
-```
-
-## Building the ohif/viewer-google-cloud Docker Image
-
-The
-[ohif/viewer-google-cloud](https://cloud.docker.com/u/ohif/repository/docker/ohif/viewer-google-cloud)
-Docker image is built as follows. The Dockerfile and nginx.conf are in the
-`/dockersupport/viewer-google-cloud` folder.
-
-1. [Install Meteor](https://www.meteor.com/install)
-1. Clone the repository
-
-```bash
-git clone https://github.com/OHIF/Viewers.git
-cd Viewers
-```
-
-1. Install meteor-build-client-fixed2 so you can build the Standalone Viewer
-
-```bash
-npm install -g meteor-build-client-fixed2
-```
-
-1. Build the Standalone client-only OHIF Viewer
-
-```bash
-cd OHIFViewer/
-METEOR_PACKAGE_DIRS="../Packages" meteor npm install
-METEOR_PACKAGE_DIRS="../Packages" meteor-build-client-fixed2 ../dockersupport/viewer-google-cloud/build -s ../config/oidc.json
-```
-
-1. Build the Docker image
-
-```bash
-cd ../dockersupport/viewer-google-cloud
-docker build -t ohif/viewer-google-cloud .
-```
-
-1. Run the Docker image using an OAuth Client ID
-
-```bash
-docker run --env CLIENT_ID={$someID}.apps.googleusercontent.com --publish 3000:80 ohif/viewer-google-cloud
+docker run --env CLIENT_ID=$CLIENT_ID --publish 3000:80 ohif/viewer:latest
 ```
@@ -1074,10 +1074,10 @@ gitbook-plugin-sitemap@^1.2.0:
  dependencies:
    sitemap "1.5.0"

-gitbook-plugin-theme-cornerstone@^1.1.2:
-  version "1.1.3"
-  resolved "https://registry.yarnpkg.com/gitbook-plugin-theme-cornerstone/-/gitbook-plugin-theme-cornerstone-1.1.3.tgz#320e1d688eaf27dbf8d580f285509b55984437fd"
-  integrity sha512-fURj67XGQ5rZPj8LXbwEviMxLfWgN/s08t9Wnp1dQqffBUJwsLe00R/IeecOjsQHJ3Gvb8GjbXJ6qzIDGu5hPA==
+gitbook-plugin-theme-cornerstone@^1.1.4:
+  version "1.1.4"
+  resolved "https://registry.yarnpkg.com/gitbook-plugin-theme-cornerstone/-/gitbook-plugin-theme-cornerstone-1.1.4.tgz#bc21b65acee2ac67e2ddb0986442ec448fe0c7fb"
+  integrity sha512-BADgFyEKhkc0pPSBRwXa5VU2UoYQkd2cRwjrtjHyV6w4h/M7uyeWYFOcsgi2ju3rpHRCwF8lMg/TtDdAV8V1SQ==

 gitbook-plugin-versions@^2.1.4:
  version "2.1.4"
@@ -1608,9 +1608,9 @@ lodash.map@^4.4.0:
  integrity sha1-dx7Hg540c9nEzeKLGTlMNWL09tM=

 lodash.merge@^4.4.0:
-  version "4.6.1"
-  resolved "https://registry.yarnpkg.com/lodash.merge/-/lodash.merge-4.6.1.tgz#adc25d9cb99b9391c59624f379fbba60d7111d54"
-  integrity sha512-AOYza4+Hf5z1/0Hztxpm2/xiPZgi/cjMqdnKTUWTBSKchJlxXXuUSxCCl8rJlf4g6yww/j6mA8nC8Hw/EZWxKQ==
+  version "4.6.2"
+  resolved "https://registry.yarnpkg.com/lodash.merge/-/lodash.merge-4.6.2.tgz#558aa53b43b661e1925a0afdfa36a9a1085fe57a"
+  integrity sha512-0KpjqXRVvrYyCsX1swR/XTK0va6VQkQM6MNo7PqW77ByjAhoARA8EfrP1N4+KlKj8YS0ZUCtRT/YUuhyYDujIQ==

 lodash.pad@^4.1.0:
  version "4.5.1"
@@ -1,8 +0,0 @@
-module.exports.interfaceVersion = 2;
-
-module.exports.resolve = (source, file, aliases) => {
-  if (aliases[source]) {
-    return { found: true, path: aliases[source] };
-  }
-  return { found: false };
-};
@@ -1,8 +0,0 @@
-# Change Log
-
-All notable changes to this project will be documented in this file.
-See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
-
-## 0.0.39-alpha.0 (2019-08-05)
-
-**Note:** Version bump only for package @ohif/extension-cornerstone
@@ -1,67 +0,0 @@
-const path = require('path');
-const webpack = require('webpack');
-const ExtractCssChunks = require('extract-css-chunks-webpack-plugin');
-
-const SRC_DIR = path.join(__dirname, '../src');
-const DIST_DIR = path.join(__dirname, '../dist');
-
-module.exports = (env, argv) => {
-  return {
-    entry: {
-      app: `${SRC_DIR}/index.js`,
-    },
-    context: SRC_DIR,
-    resolve: {
-      extensions: ['.js', '.jsx', '.json', '*'],
-      symlinks: true,
-    },
-    module: {
-      rules: [
-        {
-          test: /\.(js|jsx)$/,
-          exclude: [/node_modules/],
-          loader: 'babel-loader',
-          options: {
-            // Find babel.config.js in monorepo root
-            // https://babeljs.io/docs/en/options#rootmode
-            rootMode: 'upward',
-            presets: [
-              [
-                '@babel/preset-env',
-                {
-                  // Do not transform ES6 modules to another format.
-                  // Webpack will take care of that.
-                  modules: false,
-                },
-              ],
-            ],
-          },
-        },
-        {
-          test: /\.css$/,
-          use: [
-            'style-loader',
-            ExtractCssChunks.loader,
-            { loader: 'css-loader', options: { importLoaders: 1 } },
-            {
-              loader: 'postcss-loader',
-              options: {
-                config: {
-                  path: './postcss.config.js',
-                },
-              },
-            },
-          ],
-        },
-      ],
-    },
-    plugins: [
-      new webpack.EnvironmentPlugin(['NODE_ENV']),
-      new ExtractCssChunks({
-        filename: '[name].css',
-        chunkFilename: '[id].css',
-        // hot: true /* only necessary if hot reloading not function*/
-      }),
-    ],
-  };
-};
@@ -1,64 +0,0 @@
-const merge = require('webpack-merge');
-const path = require('path');
-const common = require('./webpack.common');
-const pkg = require('./../package.json');
-
-const ROOT_DIR = path.join(__dirname, './..');
-const SRC_DIR = path.join(__dirname, '../src');
-const DIST_DIR = path.join(__dirname, '../dist');
-
-module.exports = (env, argv) => {
-  const commonConfig = common(env, argv);
-
-  return merge(commonConfig, {
-    mode: 'production',
-    stats: {
-      colors: false,
-      hash: true,
-      timings: true,
-      assets: true,
-      chunks: true,
-      chunkModules: true,
-      modules: true,
-      children: true,
-      warnings: true,
-    },
-    optimization: {
-      minimize: true,
-      sideEffects: true,
-    },
-    output: {
-      path: ROOT_DIR,
-      library: 'ohifCornerstoneExtension',
-      libraryTarget: 'umd',
-      filename: pkg.main,
-      auxiliaryComment: 'Test Comment',
-    },
-    module: {
-      rules: [
-        {
-          test: /\.(gif|jpe?g|png|svg)$/i,
-          use: [
-            {
-              loader: 'url-loader',
-              options: {
-                limit: 8192,
-              },
-            },
-          ],
-        },
-        {
-          test: /\.(ttf|eot|woff|woff2)$/i,
-          use: [
-            {
-              loader: 'url-loader',
-              options: {
-                limit: 50000,
-              },
-            },
-          ],
-        },
-      ],
-    },
-  });
-};
@@ -1,54 +0,0 @@
-{
-  "name": "@ohif/extension-cornerstone",
-  "version": "0.0.39-alpha.0",
-  "description": "OHIF extension for Cornerstone",
-  "author": "OHIF",
-  "license": "MIT",
-  "repository": "OHIF/Viewers",
-  "main": "dist/index.umd.js",
-  "module": "src/index.js",
-  "engines": {
-    "node": ">=8",
-    "npm": ">=5"
-  },
-  "files": [
-    "dist",
-    "README.md"
-  ],
-  "publishConfig": {
-    "access": "public"
-  },
-  "scripts": {
-    "build": "rollup -c",
-    "lerna:build": "webpack --config config/webpack.prod.js -w -d",
-    "prepublishOnly": "yarn run build",
-    "start": "rollup -c -w"
-  },
-  "peerDependencies": {
-    "@ohif/core": "^0.6.0",
-    "@ohif/ui": "^0.6.0",
-    "cornerstone-core": "^2.2.8",
-    "cornerstone-math": "^0.1.8",
-    "cornerstone-tools": "^3.1.0",
-    "cornerstone-wado-image-loader": "^2.2.3",
-    "dcmjs": "^0.3.8",
-    "dicom-parser": "^1.8.3",
-    "hammerjs": "^2.0.8",
-    "prop-types": "^15.6.2",
-    "react": "^15.0.0 || ^16.0.0",
-    "react-dom": "^15.0.0 || ^16.0.0",
-    "react-redux": "^6.0.0",
-    "react-resize-detector": "^3.4.0",
-    "redux": "^4.0.1"
-  },
-  "dependencies": {
-    "@babel/runtime": "^7.2.0",
-    "classnames": "^2.2.6",
-    "lodash.throttle": "^4.1.1",
-    "react-cornerstone-viewport": "0.1.30"
-  },
-  "devDependencies": {
-    "gh-pages": "^2.0.1",
-    "lodash.clonedeep": "^4.5.0"
-  }
-}
@@ -1,8 +0,0 @@
-# Change Log
-
-All notable changes to this project will be documented in this file.
-See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
-
-## 0.0.4-alpha.0 (2019-08-05)
-
-**Note:** Version bump only for package @ohif/extension-dicom-html
@@ -1,67 +0,0 @@
-const path = require('path');
-const webpack = require('webpack');
-const ExtractCssChunks = require('extract-css-chunks-webpack-plugin');
-
-const SRC_DIR = path.join(__dirname, '../src');
-const DIST_DIR = path.join(__dirname, '../dist');
-
-module.exports = (env, argv) => {
-  return {
-    entry: {
-      app: `${SRC_DIR}/index.js`,
-    },
-    context: SRC_DIR,
-    resolve: {
-      extensions: ['.js', '.jsx', '.json', '*'],
-      symlinks: true,
-    },
-    module: {
-      rules: [
-        {
-          test: /\.jsx?$/,
-          exclude: [/node_modules/],
-          loader: 'babel-loader',
-          options: {
-            // Find babel.config.js in monorepo root
-            // https://babeljs.io/docs/en/options#rootmode
-            rootMode: 'upward',
-            presets: [
-              [
-                '@babel/preset-env',
-                {
-                  // Do not transform ES6 modules to another format.
-                  // Webpack will take care of that.
-                  modules: false,
-                },
-              ],
-            ],
-          },
-        },
-        {
-          test: /\.css$/,
-          use: [
-            'style-loader',
-            ExtractCssChunks.loader,
-            { loader: 'css-loader', options: { importLoaders: 1 } },
-            {
-              loader: 'postcss-loader',
-              options: {
-                config: {
-                  path: './postcss.config.js',
-                },
-              },
-            },
-          ],
-        },
-      ],
-    },
-    plugins: [
-      new webpack.EnvironmentPlugin(['NODE_ENV']),
-      new ExtractCssChunks({
-        filename: '[name].css',
-        chunkFilename: '[id].css',
-        // hot: true /* only necessary if hot reloading not function*/
-      }),
-    ],
-  };
-};
@@ -1,64 +0,0 @@
-const merge = require('webpack-merge');
-const path = require('path');
-const common = require('./webpack.common');
-const pkg = require('./../package.json');
-
-const ROOT_DIR = path.join(__dirname, './..');
-const SRC_DIR = path.join(__dirname, '../src');
-const DIST_DIR = path.join(__dirname, '../dist');
-
-module.exports = (env, argv) => {
-  const commonConfig = common(env, argv);
-
-  return merge(commonConfig, {
-    mode: 'production',
-    stats: {
-      colors: false,
-      hash: true,
-      timings: true,
-      assets: true,
-      chunks: true,
-      chunkModules: true,
-      modules: true,
-      children: true,
-      warnings: true,
-    },
-    optimization: {
-      minimize: true,
-      sideEffects: true,
-    },
-    output: {
-      path: ROOT_DIR,
-      library: 'ohifCornerstoneExtension',
-      libraryTarget: 'umd',
-      filename: pkg.main,
-      auxiliaryComment: 'Test Comment',
-    },
-    module: {
-      rules: [
-        {
-          test: /\.(gif|jpe?g|png|svg)$/i,
-          use: [
-            {
-              loader: 'url-loader',
-              options: {
-                limit: 8192,
-              },
-            },
-          ],
-        },
-        {
-          test: /\.(ttf|eot|woff|woff2)$/i,
-          use: [
-            {
-              loader: 'url-loader',
-              options: {
-                limit: 50000,
-              },
-            },
-          ],
-        },
-      ],
-    },
-  });
-};
@@ -1,39 +0,0 @@
-{
-  "name": "@ohif/extension-dicom-html",
-  "version": "0.0.4-alpha.0",
-  "description": "OHIF extension for rendering structured reports to HTML",
-  "author": "OHIF",
-  "license": "MIT",
-  "repository": "OHIF/Viewers",
-  "main": "dist/index.umd.js",
-  "module": "src/index.js",
-  "engines": {
-    "node": ">=8",
-    "npm": ">=5"
-  },
-  "scripts": {
-    "lerna:build": "webpack --config config/webpack.prod.js -w -d",
-    "prepublishOnly": "npm run build",
-    "start": "rollup -c -w"
-  },
-  "peerDependencies": {
-    "@ohif/core": "^0.6.0",
-    "dcmjs": "^0.3.3",
-    "prop-types": "^15.6.2",
-    "react": "^15.0.0 || ^16.0.0",
-    "react-dom": "^15.0.0 || ^16.0.0"
-  },
-  "dependencies": {
-    "@babel/runtime": "^7.2.0"
-  },
-  "devDependencies": {
-    "gh-pages": "^2.0.1",
-    "lodash.clonedeep": "^4.5.0"
-  },
-  "files": [
-    "dist"
-  ],
-  "publishConfig": {
-    "access": "public"
-  }
-}
@@ -1,8 +0,0 @@
-# Change Log
-
-All notable changes to this project will be documented in this file.
-See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
-
-## 0.0.9-alpha.0 (2019-08-05)
-
-**Note:** Version bump only for package @ohif/extension-dicom-microscopy
@@ -1,67 +0,0 @@
-const path = require('path');
-const webpack = require('webpack');
-const ExtractCssChunks = require('extract-css-chunks-webpack-plugin');
-
-const SRC_DIR = path.join(__dirname, '../src');
-const DIST_DIR = path.join(__dirname, '../dist');
-
-module.exports = (env, argv) => {
-  return {
-    entry: {
-      app: `${SRC_DIR}/index.js`,
-    },
-    context: SRC_DIR,
-    resolve: {
-      extensions: ['.js', '.jsx', '.json', '*'],
-      symlinks: true,
-    },
-    module: {
-      rules: [
-        {
-          test: /\.jsx?$/,
-          exclude: [/node_modules/],
-          loader: 'babel-loader',
-          options: {
-            // Find babel.config.js in monorepo root
-            // https://babeljs.io/docs/en/options#rootmode
-            rootMode: 'upward',
-            presets: [
-              [
-                '@babel/preset-env',
-                {
-                  // Do not transform ES6 modules to another format.
-                  // Webpack will take care of that.
-                  modules: false,
-                },
-              ],
-            ],
-          },
-        },
-        {
-          test: /\.css$/,
-          use: [
-            'style-loader',
-            ExtractCssChunks.loader,
-            { loader: 'css-loader', options: { importLoaders: 1 } },
-            {
-              loader: 'postcss-loader',
-              options: {
-                config: {
-                  path: './postcss.config.js',
-                },
-              },
-            },
-          ],
-        },
-      ],
-    },
-    plugins: [
-      new webpack.EnvironmentPlugin(['NODE_ENV']),
-      new ExtractCssChunks({
-        filename: '[name].css',
-        chunkFilename: '[id].css',
-        // hot: true /* only necessary if hot reloading not function*/
-      }),
-    ],
-  };
-};
@@ -1,64 +0,0 @@
-const merge = require('webpack-merge');
-const path = require('path');
-const common = require('./webpack.common');
-const pkg = require('./../package.json');
-
-const ROOT_DIR = path.join(__dirname, './..');
-const SRC_DIR = path.join(__dirname, '../src');
-const DIST_DIR = path.join(__dirname, '../dist');
-
-module.exports = (env, argv) => {
-  const commonConfig = common(env, argv);
-
-  return merge(commonConfig, {
-    mode: 'production',
-    stats: {
-      colors: false,
-      hash: true,
-      timings: true,
-      assets: true,
-      chunks: true,
-      chunkModules: true,
-      modules: true,
-      children: true,
-      warnings: true,
-    },
-    optimization: {
-      minimize: true,
-      sideEffects: true,
-    },
-    output: {
-      path: ROOT_DIR,
-      library: 'ohifCornerstoneExtension',
-      libraryTarget: 'umd',
-      filename: pkg.main,
-      auxiliaryComment: 'Test Comment',
-    },
-    module: {
-      rules: [
-        {
-          test: /\.(gif|jpe?g|png|svg)$/i,
-          use: [
-            {
-              loader: 'url-loader',
-              options: {
-                limit: 8192,
-              },
-            },
-          ],
-        },
-        {
-          test: /\.(ttf|eot|woff|woff2)$/i,
-          use: [
-            {
-              loader: 'url-loader',
-              options: {
-                limit: 50000,
-              },
-            },
-          ],
-        },
-      ],
-    },
-  });
-};
@@ -1,38 +0,0 @@
-{
-  "name": "@ohif/extension-dicom-microscopy",
-  "version": "0.0.9-alpha.0",
-  "description": "OHIF extension for Dicom Microscopy",
-  "author": "OHIF",
-  "license": "MIT",
-  "repository": "OHIF/Viewers",
-  "main": "dist/index.umd.js",
-  "module": "src/index.js",
-  "engines": {
-    "node": ">=8",
-    "npm": ">=5"
-  },
-  "scripts": {
-    "lerna:build": "webpack --config config/webpack.prod.js -w -d",
-    "prepublishOnly": "npm run build",
-    "start": "rollup -c -w"
-  },
-  "peerDependencies": {
-    "@ohif/core": "^0.6.0",
-    "react": "^15.0.0 || ^16.0.0",
-    "react-dom": "^15.0.0 || ^16.0.0"
-  },
-  "devDependencies": {
-    "gh-pages": "^2.0.1"
-  },
-  "files": [
-    "dist"
-  ],
-  "publishConfig": {
-    "access": "public"
-  },
-  "dependencies": {
-    "@babel/runtime": "^7.2.0",
-    "classnames": "^2.2.6",
-    "dicom-microscopy-viewer": "^0.4.3"
-  }
-}
@@ -1,8 +0,0 @@
-# Change Log
-
-All notable changes to this project will be documented in this file.
-See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
-
-## 0.0.8-alpha.0 (2019-08-05)
-
-**Note:** Version bump only for package @ohif/extension-dicom-pdf
@@ -1,67 +0,0 @@
-const path = require('path');
-const webpack = require('webpack');
-const ExtractCssChunks = require('extract-css-chunks-webpack-plugin');
-
-const SRC_DIR = path.join(__dirname, '../src');
-const DIST_DIR = path.join(__dirname, '../dist');
-
-module.exports = (env, argv) => {
-  return {
-    entry: {
-      app: `${SRC_DIR}/index.js`,
-    },
-    context: SRC_DIR,
-    resolve: {
-      extensions: ['.js', '.jsx', '.json', '*'],
-      symlinks: true,
-    },
-    module: {
-      rules: [
-        {
-          test: /\.jsx?$/,
-          exclude: [/node_modules/],
-          loader: 'babel-loader',
-          options: {
-            // Find babel.config.js in monorepo root
-            // https://babeljs.io/docs/en/options#rootmode
-            rootMode: 'upward',
-            presets: [
-              [
-                '@babel/preset-env',
-                {
-                  // Do not transform ES6 modules to another format.
-                  // Webpack will take care of that.
-                  modules: false,
-                },
-              ],
-            ],
-          },
-        },
-        {
-          test: /\.css$/,
-          use: [
-            'style-loader',
-            ExtractCssChunks.loader,
-            { loader: 'css-loader', options: { importLoaders: 1 } },
-            {
-              loader: 'postcss-loader',
-              options: {
-                config: {
-                  path: './postcss.config.js',
-                },
-              },
-            },
-          ],
-        },
-      ],
-    },
-    plugins: [
-      new webpack.EnvironmentPlugin(['NODE_ENV']),
-      new ExtractCssChunks({
-        filename: '[name].css',
-        chunkFilename: '[id].css',
-        // hot: true /* only necessary if hot reloading not function*/
-      }),
-    ],
-  };
-};
@@ -1,64 +0,0 @@
-const merge = require('webpack-merge');
-const path = require('path');
-const common = require('./webpack.common');
-const pkg = require('./../package.json');
-
-const ROOT_DIR = path.join(__dirname, './..');
-const SRC_DIR = path.join(__dirname, '../src');
-const DIST_DIR = path.join(__dirname, '../dist');
-
-module.exports = (env, argv) => {
-  const commonConfig = common(env, argv);
-
-  return merge(commonConfig, {
-    mode: 'production',
-    stats: {
-      colors: false,
-      hash: true,
-      timings: true,
-      assets: true,
-      chunks: true,
-      chunkModules: true,
-      modules: true,
-      children: true,
-      warnings: true,
-    },
-    optimization: {
-      minimize: true,
-      sideEffects: true,
-    },
-    output: {
-      path: ROOT_DIR,
-      library: 'ohifCornerstoneExtension',
-      libraryTarget: 'umd',
-      filename: pkg.main,
-      auxiliaryComment: 'Test Comment',
-    },
-    module: {
-      rules: [
-        {
-          test: /\.(gif|jpe?g|png|svg)$/i,
-          use: [
-            {
-              loader: 'url-loader',
-              options: {
-                limit: 8192,
-              },
-            },
-          ],
-        },
-        {
-          test: /\.(ttf|eot|woff|woff2)$/i,
-          use: [
-            {
-              loader: 'url-loader',
-              options: {
-                limit: 50000,
-              },
-            },
-          ],
-        },
-      ],
-    },
-  });
-};
@@ -1,41 +0,0 @@
-{
-  "name": "@ohif/extension-dicom-pdf",
-  "version": "0.0.8-alpha.0",
-  "description": "OHIF extension for Dicom PDF",
-  "author": "OHIF",
-  "license": "MIT",
-  "repository": "OHIF/Viewers",
-  "main": "dist/index.umd.js",
-  "module": "src/index.js",
-  "engines": {
-    "node": ">=8",
-    "npm": ">=5"
-  },
-  "scripts": {
-    "lerna:build": "webpack --config config/webpack.prod.js -w -d",
-    "prepublishOnly": "yarn run build",
-    "start": "rollup -c -w"
-  },
-  "peerDependencies": {
-    "@ohif/core": "^0.6.0",
-    "dicom-parser": "^1.8.3",
-    "prop-types": "^15.6.2",
-    "react": "^15.0.0 || ^16.0.0",
-    "react-dom": "^15.0.0 || ^16.0.0"
-  },
-  "dependencies": {
-    "@babel/runtime": "^7.2.0",
-    "classnames": "^2.2.6",
-    "lodash.isequal": "^4.5.0"
-  },
-  "devDependencies": {
-    "gh-pages": "^2.0.1",
-    "lodash.clonedeep": "^4.5.0"
-  },
-  "files": [
-    "dist"
-  ],
-  "publishConfig": {
-    "access": "public"
-  }
-}
@@ -0,0 +1,14 @@
+{
+  "presets": [
+    ["@babel/preset-env", {
+      "targets": {
+        "ie": "11"
+      }
+    }],
+    "@babel/preset-react"
+  ],
+  "plugins": [
+    "@babel/plugin-proposal-class-properties",
+    "@babel/plugin-transform-runtime"
+  ]
+}
@@ -0,0 +1,9 @@
+{
+  "trailingComma": "es5",
+  "printWidth": 80,
+  "proseWrap": "always",
+  "tabWidth": 2,
+  "semi": true,
+  "singleQuote": true,
+  "endOfLine": "lf"
+}
@@ -0,0 +1,101 @@
+{
+  "name": "@ohif/extension-cornerstone",
+  "version": "0.0.40",
+  "description": "OHIF extension for Cornerstone",
+  "author": "OHIF",
+  "license": "MIT",
+  "repository": "OHIF/Viewers",
+  "main": "dist/index.umd.js",
+  "module": "dist/index.es.js",
+  "jsnext:main": "dist/index.es.js",
+  "engines": {
+    "node": ">=8",
+    "npm": ">=5"
+  },
+  "scripts": {
+    "build": "rollup -c",
+    "prepublishOnly": "npm run build",
+    "start": "rollup -c -w",
+    "lint": "eslint -c .eslintrc --fix src && prettier --single-quote --write src/**/*.{js,jsx,json,css}"
+  },
+  "peerDependencies": {
+    "cornerstone-core": "^2.2.8",
+    "cornerstone-math": "^0.1.8",
+    "cornerstone-tools": "^3.1.0",
+    "cornerstone-wado-image-loader": "^2.2.3",
+    "dcmjs": "^0.3.8",
+    "dicom-parser": "^1.8.3",
+    "hammerjs": "^2.0.8",
+    "ohif-core": "^0.6.0",
+    "prop-types": "^15.6.2",
+    "react": "^15.0.0 || ^16.0.0",
+    "react-dom": "^15.0.0 || ^16.0.0",
+    "react-redux": "^6.0.0",
+    "react-resize-detector": "^3.4.0",
+    "react-viewerbase": "^0.6.0",
+    "redux": "^4.0.1"
+  },
+  "dependencies": {
+    "@babel/runtime": "^7.2.0",
+    "classnames": "^2.2.6",
+    "lodash.throttle": "^4.1.1",
+    "react-cornerstone-viewport": "0.1.30"
+  },
+  "devDependencies": {
+    "@babel/core": "^7.2.2",
+    "@babel/plugin-external-helpers": "^7.2.0",
+    "@babel/plugin-proposal-class-properties": "^7.2.3",
+    "@babel/plugin-transform-runtime": "^7.2.0",
+    "@babel/preset-env": "^7.2.3",
+    "@babel/preset-react": "^7.0.0",
+    "babel-eslint": "^10.0.1",
+    "cross-env": "^5.2.0",
+    "eslint": "5.13.0",
+    "eslint-plugin-import": "^2.14.0",
+    "eslint-plugin-node": "^8.0.0",
+    "eslint-plugin-promise": "^4.0.1",
+    "eslint-plugin-react": "^7.11.1",
+    "gh-pages": "^2.0.1",
+    "husky": "^1.3.1",
+    "lint-staged": "^8.1.0",
+    "lodash.clonedeep": "^4.5.0",
+    "prettier": "^1.15.3",
+    "react": "^16.6.3",
+    "react-dom": "^16.6.3",
+    "rollup": "^1.1.2",
+    "rollup-plugin-babel": "^4.2.0",
+    "rollup-plugin-commonjs": "^9.2.0",
+    "rollup-plugin-node-builtins": "^2.1.2",
+    "rollup-plugin-node-resolve": "^4.0.0",
+    "rollup-plugin-peer-deps-external": "^2.2.0",
+    "rollup-plugin-postcss": "^2.0.3",
+    "rollup-plugin-url": "^2.1.0",
+    "stylelint": "^9.9.0",
+    "stylelint-config-recommended": "^2.1.0",
+    "stylus": "^0.54.5"
+  },
+  "husky": {
+    "hooks": {
+      "pre-commit": "lint-staged"
+    }
+  },
+  "lint-staged": {
+    "src/**/*.{js,jsx,json,css}": [
+      "prettier --single-quote --write",
+      "git add"
+    ]
+  },
+  "browserslist": [
+    ">0.2%",
+    "not dead",
+    "not ie <= 11",
+    "not op_mini all"
+  ],
+  "files": [
+    "dist",
+    "README.md"
+  ],
+  "publishConfig": {
+    "access": "public"
+  }
+}
Author	SHA1	Message	Date
David Wire	ca735fa070	fix(availableTools): add ArrowAnnotate as an available tool (#667 ) * add ArrowAnnotate as an available tool * review response - remove the cargo culted mouseButtonMasks	2019-07-17 09:45:29 -04:00
David Wire	3d425f54cc	fix(ToolbarRow): Update ToolbarRow so that an activeButton in a submenu is passed in as an activeCom (#668 )	2019-07-17 10:13:59 +02:00
Romulo Bordezani	7bc9b45853	feat(svfCursorsSupport): enable CornerstoneTools SVG Icons on OHIF Viewer (#659 ) (#672 ) - Fixes the issue 659.	2019-07-16 22:41:41 -04:00
João Felipe de Medeiros Moreira	5bd3af0cca	fix(Viewer): Removes fixed modality and get the one returned from ohif-core (#664 ) * fix(Viewer): Removes fixed modality insert and starting using the information returned from ohif-cor * fix(Viewer): Includes condition when display set does not have modality information to use UN for un	2019-07-15 10:09:58 -04:00
Erik Ziegler	d4aee36542	fix(GoogleCloud): Fix Cloud Healthcare file upload buttons (#658 ) fix #654	2019-07-11 23:32:49 +02:00
dependabot[bot]	2a281da19f	chore(deps): bump lodash.merge in /extensions/ohif-i18n (#647 ) Bumps [lodash.merge](https://github.com/lodash/lodash) from 4.6.1 to 4.6.2. - [Release notes](https://github.com/lodash/lodash/releases) - [Commits](https://github.com/lodash/lodash/commits) Signed-off-by: dependabot[bot] <support@github.com>	2019-07-11 09:54:49 -07:00
dependabot[bot]	4631218dcb	chore(deps): bump lodash.merge in /extensions/ohif-vtk-extension (#646 ) Bumps [lodash.merge](https://github.com/lodash/lodash) from 4.6.1 to 4.6.2. - [Release notes](https://github.com/lodash/lodash/releases) - [Commits](https://github.com/lodash/lodash/commits) Signed-off-by: dependabot[bot] <support@github.com>	2019-07-11 09:45:47 -07:00
Erik Ziegler	8b3e5dffb1	fix(filesToStudies): Improve error handling for local file viewing (#652 )	2019-07-11 14:34:29 +02:00
Erik Ziegler	ef6819cf40	fix(docker-google-cloud): Update docker build process to allow Google Cloud CLIENT_ID to be passed in at runtime, update docs. (#651 )	2019-07-11 14:08:00 +02:00
Erik Ziegler	2f104b5e91	feat(ViewerLocalFileData): Add drag/drop to load DICOM files in the Viewer at /local (#644 )	2019-07-11 13:49:29 +02:00
Erik Ziegler	f256ac5a7d	fix(package.json): Fix issues with babel-core causes undefined _objectSpread2 (#650 )	2019-07-11 12:59:33 +02:00
Erik Ziegler	3a4ee9e346	fix(DicomUploadService): Remove require usage (#649 )	2019-07-11 12:18:25 +02:00
Biharck Araujo	1a9cfea365	fix(ToolbarRow): Add i18n string for Series switcher (#634 )	2019-07-11 11:32:09 +02:00
Erik Ziegler	9055f19fb5	ci(Add e2e test for script tag usage to CI): (#648 )	2019-07-11 11:06:32 +02:00
Erik Ziegler	bcbc5e4bbf	fix(yarn.lock): Blow away lockfile because it seems to be broken for some users (#643 )	2019-07-11 10:18:21 +02:00
dependabot[bot]	408ba36f4f	chore(deps): bump lodash.merge from 4.6.1 to 4.6.2 in /docs/latest (#645 ) Bumps [lodash.merge](https://github.com/lodash/lodash) from 4.6.1 to 4.6.2. - [Release notes](https://github.com/lodash/lodash/releases) - [Commits](https://github.com/lodash/lodash/commits) Signed-off-by: dependabot[bot] <support@github.com>	2019-07-11 09:01:59 +02:00
Erik Ziegler	091cab49e0	refactor(GoogleCloud): Clean up some of the Healthcare API Adapter components (#641 )	2019-07-10 14:54:27 +02:00
Egor Lezhnin	4a09f33446	feat(GoogleCloud): Initial commits to include the Healthcare API Adapter (#584 ) * This is a React port of https://github.com/quantumsoftgroup/healthcare-api-adapter - It still needs some UI cleanup.	2019-07-10 09:26:19 +02:00
Erik Ziegler	4095629310	fix(package.json): Bump @ohif/extension-cornerstone to 0.0.40 (#638 )	2019-07-09 18:38:31 +02:00
Erik Ziegler	91d2d31846	@ohif/extension-cornerstone: Prevent errors when display set is empty object (0.0.40) (#637 )	2019-07-09 18:17:13 +02:00
João Felipe de Medeiros Moreira	ff2c1cb2f1	test(E2E): End-to-end tests for script tag (#633 ) fix #621	2019-07-09 18:08:18 +02:00
Gustavo André Lelis	727c0d8ba6	fix(labelling): Update naming of configuration to props as cornerstoneTools has also changed (#484 )	2019-07-08 21:38:03 +02:00
João Felipe de Medeiros Moreira	4b3994e788	feat(StudyList): Disable study list link/route using 'showStudyList' config property (#597 ) fix #574	2019-07-08 21:29:59 +02:00
Erik Ziegler	571dd5848f	fix(ViewerRouting): Fix routing failures for /study/x/series/y (#617 ) re #614	2019-07-08 18:27:08 +02:00
David Wire	2d48d0aa37	feat(StudyList): Add QIDO style query parameters to set initial filters (#543 ) This pull request adds the ability to use query parameters to pass filters into the StudyList from the url. These parameters are of the same form used by the QIDO requests to apply the filters. This solution seemed to me to be the most obvious way to manage them. There's one open question however, around what to do with the parameters after the initial load. For now, the URL parameters are overridden the moment the user tries to add another filter. Depending on review feedback it seems like it may make more sense for those query parameter filters to be "permanent" and so any further filtering would augment those parameters rather than replace them.	2019-07-08 18:15:06 +02:00
Erik Ziegler	562d63fa74	fix(package.json): Update @ohif/extension-dicom-microscopy to fix resizing behaviour fix #550	2019-07-08 14:31:23 +02:00
biharck	1a6246f99b	@ohif/extension-dicom-microscopy: Add resize call when the container has resized (0.0.9)	2019-07-08 14:31:23 +02:00
Erik Ziegler	ce1a62a961	chore(gitattributes): Fix gitattributes handling of .fig files	2019-07-08 13:49:56 +02:00
Evren Ozkan	dd6acb2d03	feat(extension-cornerstone): Add additional tools: Magnify, ROI Window, Probe, Ellipse, Rectangle, Invert, Rotate Right, Flip H, Flip V, Clear	2019-07-08 13:49:56 +02:00