* Viewport letter only in multi-viewport layout.

* If SliceThickness not available print N/A

* Create displaySet in local session on SR generation.

* remove empty line

* remove console log

* Give storeMeasurements an onSuccess handler instead of always creating dataSets.

Co-authored-by: Danny Brown <danny.ri.brown@gmail.com>
This commit is contained in:
James Petts 2020-06-30 15:10:27 +01:00 committed by GitHub
parent d5d219c271
commit eb8f3a63f2
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5 changed files with 34 additions and 58 deletions

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@ -10,7 +10,10 @@ import { DicomMetadataStore, IWebApiDataSource, utils } from '@ohif/core';
import getImageId from './utils/getImageId';
import * as dcmjs from 'dcmjs';
import { retrieveStudyMetadata } from './retrieveStudyMetadata.js';
import {
retrieveStudyMetadata,
deleteStudyMetadataPromise,
} from './retrieveStudyMetadata.js';
const { DicomMetaDictionary, DicomDict } = dcmjs.data;
@ -187,6 +190,7 @@ function createDicomWebApi(dicomWebConfig) {
storeInstances(instances);
});
},
deleteStudyMetadataPromise,
getImageIdsForDisplaySet(displaySet) {
const images = displaySet.images;
const imageIds = [];

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@ -24,7 +24,7 @@ function PanelMeasurementTableTracking({ servicesManager, extensionManager }) {
measurementChangeTimestamp,
200
);
const { MeasurementService } = servicesManager.services;
const { MeasurementService, DisplaySetService } = servicesManager.services;
const [
trackedMeasurements,
sendTrackedMeasurementsEvent,
@ -105,7 +105,7 @@ function PanelMeasurementTableTracking({ servicesManager, extensionManager }) {
const activeMeasurementItem = 0;
const onExportClick = () => {
const exportReport = () => {
const measurements = MeasurementService.getMeasurements();
const trackedMeasurements = measurements.filter(
m =>
@ -117,7 +117,7 @@ function PanelMeasurementTableTracking({ servicesManager, extensionManager }) {
DICOMSR.downloadReport(trackedMeasurements, dataSource);
};
const onCreateReportClick = () => {
const createReport = () => {
const measurements = MeasurementService.getMeasurements();
const trackedMeasurements = measurements.filter(
m =>
@ -125,13 +125,18 @@ function PanelMeasurementTableTracking({ servicesManager, extensionManager }) {
trackedSeries.includes(m.referenceSeriesUID)
);
const dataSources = extensionManager.getDataSources();
// TODO -> Eventually deal with multiple dataSources.
// Would need some way of saying which one is the "push" dataSource
const dataSource = dataSources[0];
DICOMSR.storeMeasurements(trackedMeasurements, dataSource);
DICOMSR.storeMeasurements(
trackedMeasurements,
dataSource,
naturalizedReport => {
DisplaySetService.makeDisplaySets([naturalizedReport]);
}
);
};
return (
@ -154,8 +159,8 @@ function PanelMeasurementTableTracking({ servicesManager, extensionManager }) {
</div>
<div className="flex justify-center p-4">
<ActionButtons
onExportClick={onExportClick}
onCreateReportClick={onCreateReportClick}
onExportClick={exportReport}
onCreateReportClick={createReport}
/>
</div>
</>

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@ -43,45 +43,6 @@ const retrieveMeasurements = server => {
return retrieveMeasurementFromSR(latestSeries, studies, serverUrl);
};
/**
* Function to be registered into MeasurementAPI to store measurements into DICOM Structured Reports
*
* @param {Object} measurementData - OHIF measurementData object
* @param {Object} filter
* @param {serverType} server
* @returns {Object} With message to be displayed on success
*/
const storeMeasurementsOld = async (measurementData, filter, server) => {
log.info('[DICOMSR] storeMeasurements');
if (!server || server.type !== 'dicomWeb') {
log.error('[DICOMSR] DicomWeb server is required!');
return Promise.reject({});
}
const serverUrl = server.wadoRoot;
const firstMeasurementKey = Object.keys(measurementData)[0];
const firstMeasurement = measurementData[firstMeasurementKey][0];
const StudyInstanceUID =
firstMeasurement && firstMeasurement.StudyInstanceUID;
try {
await stowSRFromMeasurements(measurementData, serverUrl);
if (StudyInstanceUID) {
studies.deleteStudyMetadataPromise(StudyInstanceUID);
}
return {
message: 'Measurements saved successfully',
};
} catch (error) {
log.error(
`[DICOMSR] Error while saving the measurements: ${error.message}`
);
throw new Error('Error while saving the measurements.');
}
};
/**
*
* @param {object[]} measurementData An array of measurements from the measurements service
@ -119,7 +80,7 @@ const generateReport = measurementData => {
* that you wish to serialize.
* @param {object} dataSource The dataSource that you wish to use to persist the data.
*/
const storeMeasurements = async (measurementData, dataSource) => {
const storeMeasurements = async (measurementData, dataSource, onSuccess) => {
// TODO -> Eventually use the measurements directly and not the dcmjs adapter,
// But it is good enough for now whilst we only have cornerstone as a datasource.
log.info('[DICOMSR] storeMeasurements');
@ -136,7 +97,11 @@ const storeMeasurements = async (measurementData, dataSource) => {
await dataSource.store.dicom(naturalizedReport);
if (StudyInstanceUID) {
studies.deleteStudyMetadataPromise(StudyInstanceUID);
dataSource.deleteStudyMetadataPromise(StudyInstanceUID);
}
if (onSuccess) {
onSuccess(naturalizedReport);
}
return {

View File

@ -17,6 +17,7 @@ function create({
retrieve,
store,
retrieveSeriesMetadata,
deleteStudyMetadataPromise,
getImageIdsForDisplaySet,
}) {
const defaultQuery = {
@ -59,6 +60,7 @@ function create({
store: store || defaultStore,
getImageIdsForDisplaySet,
retrieveSeriesMetadata,
deleteStudyMetadataPromise,
};
}

View File

@ -72,16 +72,16 @@ const BaseImplementation = {
study = _model.studies[_model.studies.length - 1];
}
// TODO: Worth identifying why this is being called many times with series
// that are already "added"?
const didAddSeries = study.addSeries(instances);
study.addSeries(instances);
if (didAddSeries) {
this._broadcastEvent(EVENTS.INSTANCES_ADDED, {
StudyInstanceUID,
SeriesInstanceUID,
});
}
// Broadcast an event even if we used cached data.
// This is because the mode needs to listen to instances that are added to build up its active displaySets.
// It will see there are cached displaySets and end early if this Series has already been fired in this
// Mode session for some reason.
this._broadcastEvent(EVENTS.INSTANCES_ADDED, {
StudyInstanceUID,
SeriesInstanceUID,
});
},
addStudy(study) {
const { StudyInstanceUID } = study;