OHIF-197 (#1833)
* Viewport letter only in multi-viewport layout. * If SliceThickness not available print N/A * Create displaySet in local session on SR generation. * remove empty line * remove console log * Give storeMeasurements an onSuccess handler instead of always creating dataSets. Co-authored-by: Danny Brown <danny.ri.brown@gmail.com>
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@ -10,7 +10,10 @@ import { DicomMetadataStore, IWebApiDataSource, utils } from '@ohif/core';
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import getImageId from './utils/getImageId';
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import * as dcmjs from 'dcmjs';
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import { retrieveStudyMetadata } from './retrieveStudyMetadata.js';
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import {
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retrieveStudyMetadata,
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deleteStudyMetadataPromise,
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} from './retrieveStudyMetadata.js';
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const { DicomMetaDictionary, DicomDict } = dcmjs.data;
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@ -187,6 +190,7 @@ function createDicomWebApi(dicomWebConfig) {
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storeInstances(instances);
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});
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},
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deleteStudyMetadataPromise,
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getImageIdsForDisplaySet(displaySet) {
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const images = displaySet.images;
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const imageIds = [];
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@ -24,7 +24,7 @@ function PanelMeasurementTableTracking({ servicesManager, extensionManager }) {
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measurementChangeTimestamp,
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200
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);
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const { MeasurementService } = servicesManager.services;
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const { MeasurementService, DisplaySetService } = servicesManager.services;
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const [
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trackedMeasurements,
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sendTrackedMeasurementsEvent,
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@ -105,7 +105,7 @@ function PanelMeasurementTableTracking({ servicesManager, extensionManager }) {
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const activeMeasurementItem = 0;
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const onExportClick = () => {
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const exportReport = () => {
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const measurements = MeasurementService.getMeasurements();
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const trackedMeasurements = measurements.filter(
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m =>
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@ -117,7 +117,7 @@ function PanelMeasurementTableTracking({ servicesManager, extensionManager }) {
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DICOMSR.downloadReport(trackedMeasurements, dataSource);
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};
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const onCreateReportClick = () => {
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const createReport = () => {
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const measurements = MeasurementService.getMeasurements();
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const trackedMeasurements = measurements.filter(
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m =>
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@ -125,13 +125,18 @@ function PanelMeasurementTableTracking({ servicesManager, extensionManager }) {
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trackedSeries.includes(m.referenceSeriesUID)
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);
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const dataSources = extensionManager.getDataSources();
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// TODO -> Eventually deal with multiple dataSources.
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// Would need some way of saying which one is the "push" dataSource
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const dataSource = dataSources[0];
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DICOMSR.storeMeasurements(trackedMeasurements, dataSource);
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DICOMSR.storeMeasurements(
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trackedMeasurements,
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dataSource,
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naturalizedReport => {
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DisplaySetService.makeDisplaySets([naturalizedReport]);
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}
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);
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};
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return (
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@ -154,8 +159,8 @@ function PanelMeasurementTableTracking({ servicesManager, extensionManager }) {
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</div>
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<div className="flex justify-center p-4">
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<ActionButtons
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onExportClick={onExportClick}
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onCreateReportClick={onCreateReportClick}
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onExportClick={exportReport}
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onCreateReportClick={createReport}
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/>
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</div>
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</>
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@ -43,45 +43,6 @@ const retrieveMeasurements = server => {
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return retrieveMeasurementFromSR(latestSeries, studies, serverUrl);
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};
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/**
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* Function to be registered into MeasurementAPI to store measurements into DICOM Structured Reports
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*
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* @param {Object} measurementData - OHIF measurementData object
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* @param {Object} filter
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* @param {serverType} server
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* @returns {Object} With message to be displayed on success
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*/
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const storeMeasurementsOld = async (measurementData, filter, server) => {
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log.info('[DICOMSR] storeMeasurements');
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if (!server || server.type !== 'dicomWeb') {
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log.error('[DICOMSR] DicomWeb server is required!');
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return Promise.reject({});
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}
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const serverUrl = server.wadoRoot;
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const firstMeasurementKey = Object.keys(measurementData)[0];
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const firstMeasurement = measurementData[firstMeasurementKey][0];
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const StudyInstanceUID =
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firstMeasurement && firstMeasurement.StudyInstanceUID;
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try {
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await stowSRFromMeasurements(measurementData, serverUrl);
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if (StudyInstanceUID) {
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studies.deleteStudyMetadataPromise(StudyInstanceUID);
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}
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return {
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message: 'Measurements saved successfully',
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};
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} catch (error) {
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log.error(
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`[DICOMSR] Error while saving the measurements: ${error.message}`
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);
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throw new Error('Error while saving the measurements.');
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}
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};
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/**
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*
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* @param {object[]} measurementData An array of measurements from the measurements service
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@ -119,7 +80,7 @@ const generateReport = measurementData => {
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* that you wish to serialize.
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* @param {object} dataSource The dataSource that you wish to use to persist the data.
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*/
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const storeMeasurements = async (measurementData, dataSource) => {
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const storeMeasurements = async (measurementData, dataSource, onSuccess) => {
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// TODO -> Eventually use the measurements directly and not the dcmjs adapter,
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// But it is good enough for now whilst we only have cornerstone as a datasource.
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log.info('[DICOMSR] storeMeasurements');
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@ -136,7 +97,11 @@ const storeMeasurements = async (measurementData, dataSource) => {
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await dataSource.store.dicom(naturalizedReport);
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if (StudyInstanceUID) {
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studies.deleteStudyMetadataPromise(StudyInstanceUID);
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dataSource.deleteStudyMetadataPromise(StudyInstanceUID);
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}
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if (onSuccess) {
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onSuccess(naturalizedReport);
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}
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return {
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@ -17,6 +17,7 @@ function create({
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retrieve,
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store,
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retrieveSeriesMetadata,
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deleteStudyMetadataPromise,
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getImageIdsForDisplaySet,
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}) {
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const defaultQuery = {
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@ -59,6 +60,7 @@ function create({
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store: store || defaultStore,
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getImageIdsForDisplaySet,
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retrieveSeriesMetadata,
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deleteStudyMetadataPromise,
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};
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}
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@ -72,16 +72,16 @@ const BaseImplementation = {
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study = _model.studies[_model.studies.length - 1];
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}
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// TODO: Worth identifying why this is being called many times with series
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// that are already "added"?
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const didAddSeries = study.addSeries(instances);
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study.addSeries(instances);
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if (didAddSeries) {
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this._broadcastEvent(EVENTS.INSTANCES_ADDED, {
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StudyInstanceUID,
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SeriesInstanceUID,
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});
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}
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// Broadcast an event even if we used cached data.
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// This is because the mode needs to listen to instances that are added to build up its active displaySets.
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// It will see there are cached displaySets and end early if this Series has already been fired in this
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// Mode session for some reason.
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this._broadcastEvent(EVENTS.INSTANCES_ADDED, {
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StudyInstanceUID,
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SeriesInstanceUID,
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});
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},
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addStudy(study) {
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const { StudyInstanceUID } = study;
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