Commit Graph

337 Commits

Author SHA1 Message Date
Joe Boccanfuso
db395852b6
fix(measurement service): Implemented correct check of schema keys in _isValidMeasurment. (#3750) 2023-10-30 10:44:21 -04:00
Bill Wallace
dd6d9768bb
fix(toolbar): allow customizable toolbar for active viewport and allow active tool to be deactivated via a click (#3608)
Co-authored-by: Joe Boccanfuso <joe.boccanfuso@radicalimaging.com>
2023-10-25 13:08:12 -04:00
Alireza
a3f2a1a7b0
fix(export): wrong export for the tmtv RT function (#3715) 2023-10-11 10:10:29 -04:00
Joe Boccanfuso
a9a6ad50ea
fix(segmentation): Various fixes for segmentation mode and other (#3709) 2023-10-10 10:25:30 -04:00
Alireza
8bc12a37d0
fix(bugs): fixing lots of bugs regarding release candidate (#3700) 2023-10-05 23:39:56 -04:00
Bill Wallace
108383b9ef
feat(debug): Add timing information about time to first image/all images, and query time (#3681) 2023-10-03 17:01:00 -04:00
Edward Son
eb22328fc0
fix(typescript error): Change pubSubServiceInterface file type to typescript (#3546)
Co-authored-by: edward65 <edward@afxmedical.com>
2023-10-03 12:23:40 -04:00
Joe Boccanfuso
e36a604331
fix(dicom overlay): Handle special cases of ArrayBuffer for various DICOM overlay attributes. (#3684)
Co-authored-by: Alireza <ar.sedghi@gmail.com>
2023-10-03 11:44:56 -04:00
Bill Wallace
8a335bd03d
fix(StackSync): Miscellaneous fixes for stack image sync (#3663) 2023-10-03 10:59:09 -04:00
Alireza
1129c155d2
fix(config): support more values for the useSharedArrayBuffer (#3688) 2023-10-03 10:11:32 -04:00
Alireza
48bbd6281a
feat(segmentation mode): Add create, and export SEG with Brushes (#3632) 2023-09-22 10:23:44 -04:00
Joe Boccanfuso
221dedde5d
fix(mpr): Return the original/raw hanging protocol when fetching and preserving the current active protocol. (#3670) 2023-09-21 16:45:15 -04:00
Bill Wallace
38af3112ec
fix(measurements): Update the calibration tool to match changes in CS3D (#3505)
This change makes the OHIF side consistent with the CS3D user calibration settings, and will correctly display px and rounding values consistent with the CS3D display.
2023-09-15 10:50:23 -04:00
Yaroslav Halchenko
11ca5b6eae
docs(spelling): Add codespell config + github action, run and fix a good number of typos (#3645) 2023-09-12 07:40:38 -04:00
M.D
69115da06d
feat(ImageOverlayViewerTool): add ImageOverlayViewer tool that can render image overlay (pixel overlay) of the DICOM images (#3163)
Co-authored-by: Joe Boccanfuso <joe.boccanfuso@radicalimaging.com>
2023-09-06 09:24:17 -04:00
Alireza
9045ddaedc
chore(prettier): full repo linting and code reformatting once and for all (#3627) 2023-09-01 16:19:39 -04:00
Alireza
4c6ff873e8
feat(grid): remove viewportIndex and only rely on viewportId (#3591)
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2023-08-30 16:46:55 -04:00
Joe Boccanfuso
a336992971
feat(cloud data source config): GUI and API for configuring a cloud data source with Google cloud healthcare implementation (#3589) 2023-08-25 14:19:17 -04:00
Joe Boccanfuso
0f9b36906f
feat(thumbnail highlight): Thumbnails of hydrated series are now highlighted (#3594) 2023-08-16 12:51:26 -04:00
rodrigobasilio2022
f845f87716
feat(handler): Add handler for unsupported sopclassUIDs (#3601) 2023-08-16 11:37:28 -04:00
rodrigobasilio2022
3c4795d8cb
feat(read-only config): read only ui for SEG/RT/SR (#3586) 2023-08-16 10:26:28 -04:00
Bill Wallace
53c16b928f
feat(hp priors): Study comparison hanging protocol (#3579) 2023-08-16 10:15:12 -04:00
rodrigobasilio2022
5302e5b62b
feat(Thumbnail): Display set messages support & displaying of series inconsistencies in the thumbnail (#3499)
Co-authored-by: Igor Octaviano <igoroctaviano@gmail.com>
2023-08-11 19:16:25 -03:00
Alireza
5d435424e2
lint(curly): consistent use of curly brackets in codebase (#3584) 2023-08-09 10:07:33 -04:00
Alireza
8adf663248
fix(state synchronization): SEG and RT viewports should keep their before hydration voi (#3560) 2023-08-09 08:08:23 -04:00
Alireza
156c1ba60b
perf(segmentation): make segmentation read 3x faster (#3577) 2023-08-08 14:39:31 -04:00
Igor Octaviano
0493a0d587
feat(Mode): Ability to overwrite mode configuration and small improvements (#3580) 2023-08-08 10:05:20 -04:00
Joe Boccanfuso
7bbc213f58
feat(DataSource): Allow for dynamic data source configuration and creation (#3543) 2023-07-20 11:43:05 -04:00
Joe Boccanfuso
18156bb7b1
fix(PT measurement units): Use the modality unit that arrives from cornerstone3d instead of calculating the modality unit (again) here. (#3533) 2023-07-13 09:03:17 -04:00
Alireza
4a184d0be7
fix(invert): allows volume viewport to invert and sync their invert status (#3514) 2023-07-06 12:09:34 -04:00
Joe Boccanfuso
b5599dde4e
fix(utils): remove undefined/null values from the PerFrameFunctionalGroupsSequence in combineFrameInstance. (#3515) 2023-07-04 12:33:51 -04:00
Bill Wallace
64f8bb580a
fix(colormap): update opacityMapping to opacity and use simple list renderer(#3464)
Co-authored-by: Alireza <ar.sedghi@gmail.com>
2023-07-04 11:57:59 -04:00
Alireza
3efa793e60
fix(utils): remove undefined values in combineFrameInstance (#3513) 2023-07-04 08:57:14 -04:00
Sofien-Sellami
14974b6973
fix(tmtv): Fusion_Viewport to allow displaySets to be changed (#3502)
Allows drag and drop of new sets of viewports to change them one at a time.
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2023-06-29 15:48:52 -04:00
Sofien-Sellami
abe939bd20
fix(hp): Remove filtered displaySets from parameter from study protocolEngine.findMatch() (#3343)
The changes look good and are running now successfully.
2023-06-29 11:17:08 -04:00
Sofien-Sellami
e653961858
Add support for array input for all constraints in HangingProtocolService validator (#3322)
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2023-06-29 10:56:40 -04:00
Joe Boccanfuso
15ad8f29cd
fix(date formatting): Show study date as a fallback for an empty series date and show 'No Study Date' as a back up for both (#3483) 2023-06-29 10:43:56 -04:00
Salim Kanoun
93f30f06c2
Fix tests 2023-06-06 16:57:19 +02:00
Salim Kanoun
50d2640876 accept both accept header and transfer syntax uid 2023-06-05 22:32:29 +02:00
Joe Boccanfuso
685520acab
feat(command): Added command and hotkey binding for navigate to next and previous display set. (#3409)
* fix(command): Added command and hotkey binding for navigate to next and previous display set.

* Centralized the sorting (function) of display sets since at least three
areas sort display sets: hanging protocols, study/thumbnail browser and
updateViewportDisplaySet command.

* Renamed some methods for clarity.

* Scrolling active thumbnail into view for an updateViewportDisplaySet

* Added a null check.

* Added check to minimize thumbnail scrolling.
2023-05-23 15:03:55 -04:00
Alireza
f1c0581313
fix(thumbnail): it was commented out by mistake (#3403) 2023-05-17 14:13:19 -04:00
Alireza
1881ce5cbc
feat(custom displayOptions): add custom options to every level of hp (#3372)
* feat(custom displayOptions): add custom options to every level of hanging protocols

* move set preset down to cornerstone3d

* works

* fix tmtv based on new api

* fix unit test

* close

* review1

* upgrade packages

* update packages

* apply review comments

* recursive call

* less copy

* apply review comments

* fix e2e tests

* apply review comments

* revert

* apply review comments

* apply review comments

---------

Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2023-05-16 13:07:37 -04:00
Bill Wallace
d5c5951e57
fix(SR): KO series being displayed in browser list (#3382)
* fix: KO series being displayed in browser list

* fix sr for volume viewports

* move highlight labelmap to RAF

* remove commented code

* fix the hydration bug for the SR

* apply review comments

* revert the key images for sr

* Remove some obsolete changes

* set initial image for sr instead of jump

* Remove viewportType stack

---------

Co-authored-by: Alireza <ar.sedghi@gmail.com>
2023-05-15 08:23:13 -04:00
Joe Boccanfuso
4172d0427b
fix(Measurements): in MeasurementService keep a separate set of unmapped measurements (#3385)
* fix(Measurements): return {} instead of undefined for getSOPInstanceAttributes

* PR feedback:
- separated measurements from non-acquisition plane
- reverted to previous behaviour of returning undefined in getSOPInstanceAttributes

* Added unit tests for unmapped measurements.

* PR feedback: added comments to the unmappedMeasurement used in the unit tests.
2023-05-12 16:24:00 -04:00
Alireza
84cb709b44
feat(panel and auth): fix study panel to not rely on priors and add token param to url (#3381)
* fix: multiframe

* fix the unnecessary use of prior since some servers dont like it

* add authentication via token in url

* add data citation

* add resources

* upgrade packages

* yarn lock

* apply review comments
2023-05-11 10:01:33 -04:00
Alireza
969e7698fa
chore(bump cs3d): bump package and add caching to webpack (#3353)
* chore(bump cs3d): bump package and add caching to webpack

* remove test for now
2023-05-03 12:30:02 -04:00
Alireza
ef24d89930
fix(HangingProtocolService): Add callback property & update description (#3349)
The description for the numberOfDisplaySetsWithImages property was corrected. The update also involves adding a callback property that returns several objects (matchedViewports, viewportMatchDetails, displaySetMatchDetails) and returning them from the method 'findViewportProtocols'. The refactored code also has better readability.
2023-05-02 13:31:51 -04:00
Bill Wallace
b5b936b53e
fix(jump): Jump to measurement wasn't jumping when presentation already existed (#3318)
* fix: Jump to measurement after presentation store

* Fix initial load of DICOM SR

* Fix measurement highlight issues

* Clear measurements changed to array

* Fix merge issues

* PR comments

* Removed unused formatting.  Change to single event

* Fix the unit test

* PR review comments

* refactor(viewport): simplify imports, align destructuring

Simplify import statements by removing unused imports, organize existing imports, and align destructured imports consistently across the component.

---------
2023-05-01 12:54:33 -04:00
Joe Boccanfuso
66f6e3eade
feat(DICOM Upload): Added new DICOM upload dialogue launched from the worklist page (#3326)
* feat(DICOM Upload)
OHIF #3297
- DicomWebDataSource.store.dicom now accepts an ArrayBuffer of data sets to store
- DicomWebDataSource.store.dicom now also accepts optional callbacks to track upload and an AbortSignal object to cancel upload
- Added DicomFileUploader class that performs and tracks the upload of a DICOM file
- Added various UI pieces for the upload: DicomUpload, DicomUploadProgress, DicomUploadProgressItem
- ProgressLoadingBar was extracted from LoadingIndicatorProgress so it can be reused
- Modal dialogues can now optionally prevent an outside click from closing the Modal

* Passing an XMLHttpRequest to the dataSource.store.dicom method instead of callbacks and AbortSignal.
Cleanup of various UI pieces to minimize code and increase readability.

* Made the DicomUpload component a customization module exported by the cornerstone extension.

* Exposed a copy of the data source configuration via the IWebApiDataSource interface.
Added dicomUploadEnabled to a data source's configuration.

* Code clean up.

* Upgraded the dicomweb-client version to one that provides the ability to
pass a custom HTTP request. DICOM upload uses that custom HTTP request
to track progress and cancel requests.

* Distinguished between failed and cancelled uploads.

* Allow no selection in the upload dialogue.
Fixed the styling of various progress information so that everything aligns.

* Switched from cornerstone wado image loader to cornerstone dicom image loader for DICOM upload.

* Added special cancelled icon to differentiate from failed.

* Added a bit of spacing between the upload progress bar and percentage.

* Fixed minor issue with upload rejection.

* Performance improvement for cancel all uploads:
- use React memo for each upload item progress (row)
- do not await each request of a cancel all

* Fixed various padding/spacing for the DICOM upload drop zone component.
Changed the border dashing for the DICOM upload drop zone to be a background image gradient.
Added hover and active effects to the 'Cancel All Uploads' text.
2023-04-28 16:13:47 -04:00
Alireza
c9d3c08cb6
feat(cst): Add new command to get nearby annotation tools (#3327)
* feat(cst): Add new command to get nearby annotation tools
This commit adds a new command `getNearbyAnnotation` to the `commandsModule.ts` file that identifies nearby annotation tools excluding Crosshairs and ReferenceLines. It also removes an unused mapping to `Crosshairs` in `initMeasurementService.js` and changes the command run in `findNearbyToolData.ts` to `getNearbyAnnotation`.

* perf(cornerstone): Improve performance by optimizing tools

Removes unnecessary imports to improve app's performance. Changes how annotations are detected on the `commandsModule.js` file by fetching the `isAnnotation` property of the tool instance if available. Updates `CrosshairsTool` and `ReferenceLinesTool` to not be annotations anymore. Adjusts the `localhost` URL ports for the `dcm4chee-arc` service interface on `local_dcm4chee.js` to allow for more efficient server communication.

* feat(cornerstone): Add CornerstoneServices type and ToolGroupService.getToolGroup to get tool group by ID or active viewport

This commit introduces the new CornerstoneServices interface to the code and adds the ToolGroupService.getToolGroup method, which can retrieve a specific tool group by ID or from the active viewport. The older _getToolGroup method has also been removed from commandsModule. When no tool group ID is provided, this method now retrieves the tool group from the currently active viewport with the help of getActiveViewportEnabledElement. Additionally, the required reference to @ohif/core has been removed.
2023-04-28 10:14:14 -04:00