Commit Graph

51 Commits

Author SHA1 Message Date
Alireza
7624ccb5e4
fix(multiframe): metadata handling of NM studies and loading order (#4554) 2024-11-28 13:22:40 -05:00
Alireza
7ce7127d7c
OHIF with Cornerstone3D 2.0 (#4347) 2024-11-06 07:15:27 -05:00
Bill Wallace
24c511f4bc
fix: webpack import bugs showing warnings on import (#4265) 2024-07-05 13:19:42 -04:00
Bill Wallace
a2084f319b
feat: Add interleaved HTJ2K and volume progressive loading (#4276) 2024-07-05 12:33:07 -04:00
Leonardo Campos
2048b19484
feat(studyPrefetcher): Study Prefetcher (#4206) 2024-06-28 08:58:39 -04:00
Ibrahim
731340d70a
fix(contour): set renderFill to false for contour (#4186) 2024-05-29 11:56:03 -04:00
Ibrahim
5903b0749a
feat(rt): allow rendering of points in RT Struct (#4128) 2024-05-21 17:23:18 -04:00
Ibrahim
374065bc3b
feat(typings): Enhance typing support with withAppTypes and custom services throughout OHIF (#4090) 2024-05-08 12:12:49 -04:00
Ibrahim
0156bc426f
fix(rt): enhanced RT support, utilize SVGs for rendering. (#4074) 2024-05-06 14:26:11 -04:00
Alireza
8192e348ec
feat(tmtv-mode): Add Brush tools and move SUV peak calculation to web worker (#4053) 2024-04-19 15:11:31 -04:00
Alireza
da7c1a5d8c
fix(bugs): and replace seriesInstanceUID and seriesInstanceUIDs URL with seriesInstanceUIDs (#4049) 2024-04-17 21:59:47 -04:00
Alireza
f99a0bfb31
fix(viewport): Reset viewport state and fix CINE looping, thumbnail resolution, and dynamic tool settings (#4037) 2024-04-16 11:04:48 -04:00
Ibrahim
e80fc6f477
fix(bugs): enhancements and bug fixes (#4036) 2024-04-16 09:01:06 -04:00
Alireza
df49a653be
feat(SM): remove SM measurements from measurement panel (#4022) 2024-04-10 13:44:25 -04:00
Leonardo Campos
d57e8bc157
feat(4D): Add 4D dynamic volume rendering and new pre-clinical 4d pt/ct mode (#3664)
Co-authored-by: Alireza <ar.sedghi@gmail.com>
Co-authored-by: Neil <neil.a.macphee@gmail.com>
2024-04-09 23:57:34 -04:00
Ibrahim
b7f90e3951
feat(ViewportActionMenu): window level per viewport / new patient info / colorbars/ 3D presets and 3D volume rendering (#3963)
Co-authored-by: Joe Boccanfuso <109477394+jbocce@users.noreply.github.com>
2024-04-02 09:35:30 -04:00
Alireza
566b25a544
feat(toolbar): new Toolbar to enable reactive state synchronization (#3983) 2024-03-27 16:01:32 -04:00
Alireza
b3a0faf5f5
feat(resize): Optimize resizing process and maintain zoom level (#3889) 2024-02-21 13:49:23 -05:00
Alireza
e4a116b074
fix(viewport-sync): remember synced viewports bw stack and volume and RENAME StackImageSync to ImageSliceSync (#3849) 2024-01-22 09:44:35 -05:00
Alireza
b1efe40aa1
fix(segmentation): upgrade cs3d to fix various segmentation bugs (#3885) 2024-01-09 10:15:56 -05:00
Igor Octaviano
323401418e
fix: 🐛 Run error handler for failed image requests (#3773) 2023-11-13 10:42:55 -05:00
Alireza
ee67bcc0f5
docs(faq): FAQ and Segmentation Mode Fix for some studies (#3762) 2023-11-03 12:19:24 -04:00
Bill Wallace
108383b9ef
feat(debug): Add timing information about time to first image/all images, and query time (#3681) 2023-10-03 17:01:00 -04:00
Bill Wallace
8a335bd03d
fix(StackSync): Miscellaneous fixes for stack image sync (#3663) 2023-10-03 10:59:09 -04:00
Alireza
1129c155d2
fix(config): support more values for the useSharedArrayBuffer (#3688) 2023-10-03 10:11:32 -04:00
Alireza
a67d72de85
fix(no sab): should work when shared array buffer is not required (#3686) 2023-09-29 17:54:16 -04:00
Alireza
2bd3b26a6a
perf(memory): add 16 bit texture via configuration - reduces memory by half (#3662)
Co-authored-by: Ouwen Huang <ouwen.huang@duke.edu>
2023-09-22 09:31:45 -04:00
Alireza
9045ddaedc
chore(prettier): full repo linting and code reformatting once and for all (#3627) 2023-09-01 16:19:39 -04:00
Alireza
4c6ff873e8
feat(grid): remove viewportIndex and only rely on viewportId (#3591)
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2023-08-30 16:46:55 -04:00
Bill Wallace
884577a23d
fix: Integration test instability (#3597)
There are a couple of changes here which should improve stability of the tests.  Hopefully that will be sufficient, but it is difficult to tell for sure if it is complete.
2023-08-15 07:20:45 -04:00
Alireza
4a184d0be7
fix(invert): allows volume viewport to invert and sync their invert status (#3514) 2023-07-06 12:09:34 -04:00
Salim Kanoun
c3654b7ddf rework TS 2023-06-01 23:18:54 +02:00
Alireza
969e7698fa
chore(bump cs3d): bump package and add caching to webpack (#3353)
* chore(bump cs3d): bump package and add caching to webpack

* remove test for now
2023-05-03 12:30:02 -04:00
Alireza
66863281c4
feat(RT): add dicom RT support via volume viewports (#3310)
* feat: initial RT support

* make the segmentation service work with representation data

* feat: make segmentation service work with representations

* fix rtss vis

* fix: rt hydration

* fix the rendering of rt names

* fix imports

* refactor: Modify status and click handling for hydration of RTStructures

Modify status and click handling for hydration of RTStructures by renaming `onPillClick` to `onStatusClick` in `OHIFCornerstoneRTViewport.tsx` and `_getStatusComponent.tsx` files. Also, update initial segmentation configurations in `PanelSegmentation.tsx` and simplify configuration changes and values for segmentation service in `SegmentationService.ts`. Finally, remove console debug in `CornerstoneViewportService.ts`.

* wip for highlighting contours

* refactor rt displayset code

* review code update

* update cornerstone dependencies

* refactor: Update license year, version number, and minor code cleanup

This commit updates the license year in several files, updates the version number in package.json, and contains minor code cleanup in two files.

* add bulkdataURI retrieve for RT

* fix package version

* apply review comments

* apply review comments

* apply review comments

* feat(panels): refactor and streamline segmentation configuration and inputs

Rewrote state hooks and streamlined the configuration input for `PanelSegmentation` to be more verbose and reusable. Included several new input types, including the `InputRange` component which now shows a fixed floating value based on the step provided. The `SegmentationConfig` component now works with dynamic values controlled by `initialConfig`. These changes should improve function usability and make the code more maintainable going forward.

* fix various bugs

* fix contour delete by upgrade cs3d version

* feat(viewport, inputNumber, segmentationConfig, orthanc): Implement minimum and maximum values for input number components, and useBulkDataURI for Orthanc configuration. Compare measurement view planes with absolute viewport view planes in Cornerstone viewport.

* update yarn lock
2023-04-26 12:21:08 -04:00
rodrigobasilio2022
226244a26c
feat(multiframe): enhanced support for multiframe dicom (#3164)
* Changes in cswil version and multiframe

* Minor changes

* wip

* Adding support for NM multiframe images

* Applying PR suggestions

* fixing package versions

* Restoring default.js config file

* Check if NM subtype is reconstructable

* Restore default.js values

* refactore code

* feat: add flag for strict zspacing

---------

Co-authored-by: Alireza <ar.sedghi@gmail.com>
2023-03-31 22:21:16 -04:00
Joe Boccanfuso
d5ff590dfc
feat(DoubleClick): double click a viewport to one up and back (#3285)
* feat(DoubleClick): double click a viewport to one up and back

Added a toggleOneUp command that puts the active viewport into a 1x1 grid layout
and it toggles out of 'one-up' by restoring its saved 'toggleOneUpViewportGridStore'
from the StateSyncService.
Added double click customization for the Cornerstone extension with the
default double click handling being the toggleOneUp command.
Added a cypress test for the double click functionality.

* PR feedback:
- tracked viewport measurements no longer show as dashed when toggling one up
- disallowed double clicking near a measurement
- updated cornerstone3D dependencies to fix double click of TMTV and volume viewport 3D
- created ViewportGridService.getLayoutOptionsFromState

* Updated the ViewportGridService docs.

* Switched to using 'cornerstoneViewportClickCommands' and consistency with the context menu clicks.
2023-03-29 15:39:51 -04:00
Alireza
4734b3bac6
fix(volumeLoad): should not have missing slices when loading (#3287)
* fix(volumeLoad): should not have missing slices when loading

* add review comments
2023-03-29 09:40:22 -04:00
Bill Wallace
bc642fd2b6
feat: Allow configurable context menus (#2894)
* feat: Context menu

feat: Custom context menu

Adding documentation

PR updates

* fix: Capture tool exception

* PR updates

* Add fully worked out examples in the basic test mode/extension

* Fix the menu display

* fix: Make the commands on clicks much more configurable

* Wait for load before double clicking

* docs

* PR changes - nothing functional, just moving things endlessly

* PR comments

* PR changes - rename the default context menu

* Renamed the cornerstoneContextMenu to measurementsContextMenu

* Add chevron right to the sub-menus
2023-03-22 17:45:28 -04:00
Bill Wallace
ee4e8a4105
fix: Hanging protocol state fixes (#3242)
* fix: Some residual issues with hanging protocol after state sync

fix: Some issues introduced by the state syncing changes

* fix: PR fixes, mostly code cleanup

* Improve a race condition in an automated test

* Remove obsolete code

* PR fixes
2023-03-20 15:11:21 -04:00
Bill Wallace
803f638401
feat: state sync service and hanging protocol updates to preserve state (#3131)
* feat: Add state sync and use it to remember viewport grid info

fix: Version updates

Fixes for toggling MPR mode

Fix the display when the interleaved load module fails

Fix the memory of the state to restore correctly

PR fixes for the state sync service

PR fixes

PR fixes

PR fixes

Added a hack warning to remove volumeDeactivate

Fixes for TMTV colormap setting

Fix the casing

Missed renames

fix: tests not running due to variance in ordering

Reverting some fixes to change case

PR changes - mostly comments and minor improvements

fix: All display sets were being updated on drag and drop

PR fixes - mostly renames

PR fixes

Test support for OHIF, for HP branch

test: Add at least a minimal set of automated tests for hanging protocols

Docs

PR fixes

Merge fixes

DOCS updates

Add an example of the mn hanging protocol

PR fixes

PR fixes

PR fixes

* Fix the drag and drop

PR fixes

* PR changes - update default keys for next/previous stage

* fix: Was storing the custom viewport grid too aggressively

Caused by a PR change misspelling a variable
2023-03-15 12:41:41 -04:00
md-prog
b15988359f
feat(Calibration Tool): add a calibration tool that can manually recalibrate an image and measurements on it (#3136)
* minor bug fix - reading modalities

* react error log fix - button props

* react warn fix - Typography color prop

* calibration tool without persistence

* added toolbar button for calibration tool

* icon change for calibration tool

* important bug fix for calibration - length and calibration rate calculation

* fix weird autocorrection

* [fix] bugs after merging upstream

* [refactor] conform to the new service names
2023-02-22 21:01:36 -05:00
Alireza
926290f69e
feat: add more e2e tests for MPR and add test mode and extension (#3180)
* tests: add various e2e tests for MPR and measurements

wip

add cypress config

feat: add mode and extension for testing

add hp applied through search params

add MPR tests

apply review comments

add more e2e tests

update yarn lock

* fix unit tests failing
2023-02-17 15:04:07 -05:00
Bill Wallace
ecfdc9a687
fix(typescript): Missed renames UIModalService and UserAuthenticationService (#3171) 2023-02-13 08:55:55 -05:00
Bill Wallace
8af0362d12
fix(typescript): rename services to fix typescript (#3165)
* fix: Rename services to lower camel case, hp, measure

* fix: Rename DisplaySetService instances to displaySetService

* fix: Rename CornerstoneViewportService to lower camel case

* fix: Added lower case segmentationService rename

* rename other services (#3166)

* rename uiDialogService

* rename toolGroupService

* rename uiNotificationService

* rename viewportGridService

* rename syncGroupService

* rename CornerstoneCacheService

* Fix a syntax error in hotkeys

* Fix a couple of rename issues that were missed

---------

Co-authored-by: Alireza <ar.sedghi@gmail.com>
2023-02-10 16:46:09 -05:00
Bill Wallace
7f799b8e3d
fix: Create typed services and allow lower case access to agree with naming conventions (#3141)
* fix: Add typed services

* fix: Typed services - PR changes

* remaining of the cineService and toolbarService renaming

---------

Co-authored-by: Alireza <ar.sedghi@gmail.com>
2023-02-07 14:31:55 -05:00
Alireza
1d1b33224a
feat: use wadors instead of streaming wadors for volume loading (#3109) 2023-01-11 07:19:27 -05:00
Bill Wallace
00e797801d
feat(imageLoader):Add an nth image loader strategy (#10) (#3044)
* feat(imageLoader):Add an nth image loader strategy (#10)

* Updates for PR for nth menu

* performance:Prior implementation was O(n^2), taking about 50 ms

* feat:Nth image loader, added docs as requested
2022-12-29 11:00:13 -05:00
Alireza
42dca11ae3
fix: various bugs with v33 re cine and colors (#3052)
* fix various bugs

* feat: initial work for debug page

* change throw to console error for color lookup table

* update packages

* apply review

* apply review comments
2022-12-05 09:53:59 -05:00
Alireza
bbfdda7fe7
feat: enhanced notifications and toolbar hover states (#3032)
* fix: button hover state and overlay colors in tmtv

* fix: styles for notificaionts
2022-11-21 22:35:25 -05:00
Alireza
87eab39768
fix: remaining bugs for MPR and toolbar icon colors (#3026)
* feat: warn for overlapping segments

* fix: typo

* refactor mpr toggle and stack sync

* fix: wip for more general mpr

* fix: tool groups for mpr

* fix: changing of viewport id

* fix: viewport Id for the seg viewports

* fix

* update cornerstone version
2022-11-21 10:44:19 -05:00