Commit Graph

93 Commits

Author SHA1 Message Date
Bill Wallace
f1cc2ee13a
feat: Update to use pnpm (#6031)
* Initial pnpm change

* Install/update in pnpm sort of works

* Attempt to fix install

* fix pnpm

* Refactor build process to use RSPack instead of Webpack across multiple extensions and modes. Update package.json scripts for development and production builds, and adjust webpack configuration files to accommodate new plugin imports and settings.

* Update RSPack dependencies to version 2.0.0 across the project, enhancing compatibility and performance. Refactor webpack configuration in multiple extensions and modes to utilize the new library structure for UMD output. Adjust package.json scripts and settings for improved build processes.

* Implement migration guide for OHIF 3.13, detailing the transition from Webpack to Rspack v2, the shift to pnpm workspaces, and the increase in minimum Node.js version to 24. Include new build commands, plugin replacements, and updates to package configurations across the monorepo.

* Fix some dev:fast bugs

* Move netlify to top level and remove webpack builds

* Update version script to deal with lerna missing

* chore(tests): Update multiple screenshot test images for various specs

* feat(screenshot-reviewer): Add screenshot review tool and update package.json scripts

* fix(DICOMSRDisplayTool): Improve actor presence check in viewport

* chore(tests): Update multiple screenshot assets for various specs

* chore(tests): Integrate waitForPaintToSettle and waitForViewportsRendered in multiple specs for improved rendering stability

* chore(tests): Update screenshot assets for SEGHydration and SEGNoHydration specs

* test: update progressive loading screenshots

* jest 30 test fixes for compatibility with pnpm cs3d

* Use correct setDisplaySets instead of setDataId

* fix: Naming change for LegacyVolumeViewport3D

* Update to allow tolerance for contour tests

* update

* fix

* refactor: Replace instanceof checks with utility functions for viewport type validation

* fix: Update createSegmentationForViewport to handle undefined displaySetInstanceUID gracefully

* bun lock

* chore(pnpm): align workspace setup to cornerstone3D and address PR review

- .npmrc / pnpm-workspace.yaml: mirror cs3d (node-linker hoisted,
  strict-peer-dependencies=false, link/prefer workspace packages,
  minimumReleaseAge, frozenLockfile); sync axios 1.17.0 + tmp override
- root: packageManager pnpm@11.4.0, engines pnpm >=11, wire preinstall.js
- restore preinstall.js (token/private-repo + CLAUDE->AGENTS symlink)
- playwright.yml: keep base CS3D-integration workflow, switch only the
  package manager (bun/yarn -> pnpm) and node 20 -> 24
- webpack.base.js: revert prod devtool to source-map (drop hidden-source-map)
- remove @percy/cypress; .netlify + cli templates engines pnpm >=11
- Dockerfile pin pnpm@11; document tests/globalSetup.ts warmup
- drop dicom-sr -> measurement-tracking edge (breaks pnpm cyclic dep)

* chore(pnpm): regenerate lockfile and restore cs3d:* dev scripts

- Regenerate pnpm-lock.yaml against the resolved workspace (cycle removed,
  cs3d 4.22.10, workspace:* internal deps).
- Restore cs3d:checkout/check/build/watch/install/link/unlink helper scripts
  (dropped when taking the PR's root scripts), converted yarn -> pnpm since
  the local cornerstone3D checkout is now pnpm too.

* Merge base branch issues

* Link ohif app

* ci: pin pnpm to 11.4.0 in action-setup (was version: latest)

version: latest floats across runs and breaks reproducibility. Pin to the repo's packageManager version (pnpm@11.4.0) in both playwright and build-docs workflows.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix: Accidental commit of .npmrc config

* Fix build issues

* build fix

* Dependency fixes

* fix: Dependency bug in app on extensions/modes

* Fix output configuration

* Replace percy screenshots with native cypress

* Remove percy screenshot entirely

* fix: Build issues

* force click to prevent canvas cover issues

* Enable swiftshader

* Update launch of electron

* fix: Broken size calculation

* Empty change to force a re-build

* fix(cypress): generate ui-next tailwind classes; drop unsupported electron arg

Tailwind only scanned @ohif/ui-next via ../../node_modules/@ohif/ui-next, which no longer resolves under the pnpm layout, so ui-next-unique classes (e.g. toolbar split-button sizing) were never generated. Those buttons' hit-boxes collapsed, producing Cypress 'covered by element' failures on toolbar interactions. Scan ui-next by direct filesystem path like ui/extensions/modes.

Also stop pushing --enable-unsafe-swiftshader into Electron's launchOptions.args (Electron ignores it and warns); it is supplied via ELECTRON_EXTRA_LAUNCH_ARGS in CI. The arg is still pushed for non-electron chromium (local chrome).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(e2e): disable dev-server overlay during coverage runs

The rspack dev-server client overlay injects an iframe (id=rspack-dev-server-client-overlay) that intercepts pointer events, causing Playwright/Cypress clicks on toolbar buttons to time out (e.g. MicroscopyPanel). Disable the overlay when COVERAGE=true (e2e/Playwright webServer) while keeping it for normal local dev.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* fix(microscopy): provide dicom-microscopy-viewer runtime assets

The microscopy viewer is loaded at runtime via peerImport('dicom-microscopy-viewer'), which fetches the copied asset served at /dicom-microscopy-viewer/. Two issues prevented those assets from reaching dist, so the viewer never initialized and drawing produced no measurement row:

1) dicom-microscopy-viewer was declared in no workspace package.json (only under libs/@cornerstonejs), so it was not installed at root node_modules and the pluginConfig copy source did not exist. Declare it (0.48.6, matching libs) in the microscopy extension.

2) createCopyPluginToDist appended the public/dist folder name to entries that specify an explicit directory, breaking the dicom-microscopy-viewer public entry (looked for .../dynamic-import/public). Use an explicit directory as-is; only append the folder name for package-derived entries.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>

* Update to pnpm 11.5.2 and cs3d 5.0.2

* Lock file

* fix: Update to newer versions of actions to try to fix hang

* Remove unnecessary version

* fix: Tests that are flaky

* PR comments

* Incorrect run name

* docs: Explain pluginConfig tooling

* Updated notes on pluginConfig and PR comments

* fix: resolve plugins in rsbuild build and fix directory-based asset copy

rsbuild.config.ts: merge getPluginResolveAliases() and an @ohif/app$ alias into resolve.alias, and add resolve.modules (root, platform/app, platform/ui node_modules) so extensions resolve their shared @ohif/* imports. Brings the rsbuild (dev:fast) path to parity with webpack.pwa.js / webpack.base.js.

writePluginImportsFile.js: treat a 'directory' on an extension/mode entry as the package root and copy its public/ and dist/ subdirs instead of the whole directory; public-section entries keep copying their directory verbatim via a new literalDirectory flag.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* refactor: share resolve alias/modules between webpack and rsbuild configs

Extract the resolve.alias (@ohif/app, @, @components, ...) and the node_modules search paths into .webpack/resolveConfig.js, the single source of truth consumed by both webpack.base.js (and every per-package webpack.prod/.dev.js that merges it) and rsbuild.config.ts. getModules(srcDir) appends the building package's own source root, preserving the previous per-package behavior. Ends the drift where the rsbuild path kept missing aliases/module paths that webpack.base.js already had.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* Add a timeout on git fetch and avoid all the unnecessary mirrros

* PR comments and tests

* Remove cache to prevent corrupting the cache key/setup.

* Fix stale/corrupted pnpm installer

---------

Co-authored-by: Alireza <ar.sedghi@gmail.com>
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-12 16:04:56 -04:00
Alireza
6dd150d401
fix: ohif tests to run with cornerstone 3d 5.0 (#6043)
* chore(tests): Update multiple screenshot test images for various specs

* feat(screenshot-reviewer): Add screenshot review tool and update package.json scripts

* fix(DICOMSRDisplayTool): Improve actor presence check in viewport

* chore(tests): Update multiple screenshot assets for various specs

* chore(tests): Integrate waitForPaintToSettle and waitForViewportsRendered in multiple specs for improved rendering stability

* chore(tests): Update screenshot assets for SEGHydration and SEGNoHydration specs

* test: update progressive loading screenshots

* jest 30 test fixes for compatibility with pnpm cs3d

* Use correct setDisplaySets instead of setDataId

* fix: Naming change for LegacyVolumeViewport3D

* Update to allow tolerance for contour tests

* update

* fix

* refactor: Replace instanceof checks with utility functions for viewport type validation

* fix: Update createSegmentationForViewport to handle undefined displaySetInstanceUID gracefully

* bun lock

* fix: Install cs3d with pnpm instead of bun

* Update node version for playwright

* Update to v5.0.0 of cs3d

* fix: Build dependency

* audit

* Change to a web await retry assert

* Fix timing related test failures

* fix: Freehand close

---------

Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2026-06-09 20:25:14 -04:00
Joe Boccanfuso
daae4c144e
feat(WorkList): New Study List (WorkList based on ui-next); old study list renamed to LegacyWorklist (#6005)
---------

Co-authored-by: Dan Rukas <dan.rukas@gmail.com>
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2026-05-28 12:26:30 -04:00
Ghadeer Albattarni
0c1ca6b04a
fix(segmentation): restore navigation for duplicated contour segments (#6038)
---------

Co-authored-by: diattamo <mmddiatta@gmail.com>
2026-05-26 12:22:46 -04:00
Ghadeer Albattarni
5762095cfa
test(contour): add test for RT contour position after viewport maximize/restore (#6036) 2026-05-22 13:49:00 -04:00
diattamo
2258c7957a
feat(tests): Add tests for duplicating contour segments (#6002) 2026-05-20 21:18:58 -04:00
Ghadeer Albattarni
95251ab670
fix(seg): prevent viewport orientation change when loading SEG in manual grid layout (#6021) 2026-05-19 15:59:42 -04:00
Ghadeer Albattarni
77cd9394d2
test(segmentation): add e2e test for deleting segmentation on second reload (#6013) 2026-05-19 09:24:49 -04:00
Joe Boccanfuso
fe16e80cf3
test(e2e): update Playwright screenshots and add better tests and assertions for area calculations (#6022)
* Add (better) assertions for area calculation fixes.
* Add SVG and measurement side panel area for freehand ROI test.
* Add Playwright viewport screenshot scope migration guide.
* Update cornerstonjs dependencies to 4.22.8. Ensure all versions of @babel/preset-env are 7.29.5.

---------

Co-authored-by: Ghadeer Albattarni <165973963+GhadeerAlbattarni@users.noreply.github.com>
2026-05-18 10:36:05 -04:00
Ghadeer Albattarni
397aa4d0e3
fix(measurement-tracking): restore tracked state on undo after Delete all (#5994)
* fix: always show delete confirmation when measurements exist
2026-05-12 13:22:25 -04:00
Ghadeer Albattarni
37e19f734a
fix: remove waitForVolumeLoad from main toolbar page object (#6004) 2026-05-07 18:47:27 -04:00
Ghadeer Albattarni
9cf3149d2a
test(e2e): replace waitForVolumeLoad with viewport render waits (#6000) 2026-05-07 15:42:12 -04:00
Ghadeer Albattarni
62620afb9b
test( zoomIn-tool): verify horizontal flip is preserved in magnified view (#5983) 2026-04-29 10:32:27 -04:00
Ghadeer Albattarni
f8ccf9ff2e
fix(seg): prevent segmentations from spreading to all viewports before hydration confirmation in 3D four-up (#5967) 2026-04-27 12:55:12 -04:00
Joe Boccanfuso
8fc0dc16e9
feat(slice scrollbar): Integrate ViewportSliceProgressScrollbar with customizations and docs (#5960)
Co-authored-by: Dan Rukas <dan.rukas@gmail.com>
2026-04-23 08:46:03 -04:00
Bill Wallace
f6bbd5c779
fix: A couple of changes to enable cs3d integration build (#5944)
* fix: A couple of changes to enable cs3d integration build

* Bun update

* fix: Crosshairs tests due to order changes

* Fix a race in DicomTagBrowser.spec.ts and update the comparison for the screenshot for seg hydration.

* Fix sorting issues by using consistent sort

* fix: Inconsistency in scoord loader.  Will need an update to screenshot

* Fix crosshairs stability issues and random order issues in Scoord

* Update the comparison image

* Update navigate image

* fix: Axios issue

* Update to current CS3D
2026-04-10 16:51:37 -04:00
Ghadeer Albattarni
b9029ef6f8
fix(segmentation): restrict overlay segmentation menu to same frame of reference as viewport background display set (#5900)
- Add FrameOfReferenceUID to SEG and RTSTRUCT displaySet in SOP Class Handlers so the FOR is available for filtering
- Sync optimisticOverlayDisplaySets when background display set changes so the overlay menu reflects the correct state after a background switch
- Add FOR matching guard to the hydrate segmentation synchronizer to prevent the hydration synchronizer from blindly mirroring segmentations from a source viewport to a target viewport if their primary Frames of Reference do not align.
- fix segmentation overlay order reversal on viewport re-render
2026-04-02 08:52:23 -04:00
Ghadeer Albattarni
7929f0898f
fix(measurement): Restore viewport interactivity when deleting in-progress Spline or Livewire measurement (#5905) 2026-04-01 16:52:14 -04:00
Ghadeer Albattarni
e66fb5a2b8
fix: prevent black viewport when navigating series with client-created segmentation (#5919) 2026-03-28 19:20:49 -04:00
Ghadeer Albattarni
2a728b244c
refactor(tests): update viewport page object usage to async and update all effected tests (#5927) 2026-03-27 16:37:42 -04:00
diattamo
fe762b68e8
chore(tests): contour segment interactions e2e tests - rename and togglevisibility (#5891) 2026-03-27 09:54:36 -04:00
Bill Wallace
1df671e9ab
feat: Add combined build (#5895)
* Add combined build

* Link script location update

* Security and validation fixes

* Allow specifying target path in PR description

* fix: Version match

* Fix build detection issue

* fix: Playwright deploy

* Separate out the branch merge guard

* Update docs and link info

* test: Update the layout change to wait for network idle

* Move audit late so the rest of the build can be worked on

* Add text with network check to ensure we see this change is updated

* Attempt to fix the mpr loading on ohif-downstream

* PR review comments

* Update docs

* Update to CS3D 4.20.0

* PR comments

* Add log on ohif-integration builds

* Update build test

* Removed unused space to kickoff build
2026-03-17 07:52:17 -04:00
Ghadeer Albattarni
7a38903b19
fix(sr-hydration): enable hydration and arrow navigation for 3D SR measurements (#5887)
Joe is away, so approving based on the code having the requested change, and otherwise looking good/passing tests.

* fix(sr-hydration): enable hydration and arrows navigation for 3D SR measurements

* test: add automated test for SR measurement navigation with arrows after hydration

* add cross-study warning in the 3D branch

* test: address reviewer feedback for the test

* fix: support 3D and 2D annotations for SR hydration

* test: improve navigation to first image

---------

Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2026-03-16 09:36:56 -04:00
Joe Boccanfuso
fe1ecfe0cc
fix(window level): The window level value is not displayed by default on all the viewports when selecting common/custom layout and TMTV. (#5865)
* fix(window level): Set up listener for viewport availability such that the initial window level can be read and displayed.

* PR feedback.

* PR feedback.

---------

Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2026-03-13 10:12:07 -04:00
Joe Boccanfuso
7b5d0ce40e
fix(segmentation): Display "No description S:{series number} {modality}" for segmentations with no label. (#5874)
* Bump CS3D dependency to get the fallbackLabel field additions.
2026-03-12 18:39:14 -04:00
Ghadeer Albattarni
6f773f9972
fix(seg hydration): auto-hydrate RT struct on second load with disableConfirmationPrompts (#5875) 2026-03-09 09:08:21 -04:00
Ghadeer Albattarni
2358a73c3c
fix(microscopy): rename measurement in microscopy mode (#5866) 2026-03-04 15:28:41 -05:00
Ghadeer Albattarni
7e10830d58
fix(segmentation): segment bidirectional tool error and show toast notification when no segment is drawn (#5861) 2026-03-04 15:22:10 -05:00
diattamo
f2ed4c9e6f
test(ContourSegNavigation): Add e2e tests for contour segmentation navigation (#5834)
---------

Co-authored-by: greptile-apps[bot] <165735046+greptile-apps[bot]@users.noreply.github.com>
2026-03-03 16:52:03 -05:00
Ghadeer Albattarni
92011c587f
chore(test): add FreehandROI test that MEASUREMENT_ADDED does not fire when clicking annotation text (#5846) 2026-03-02 08:12:28 -05:00
Ghadeer Albattarni
d11d6d401b
fix: prevent viewer crash when opening DICOM Tag Browser from empty viewport (#5827) 2026-02-24 08:53:05 -05:00
Ghadeer Albattarni
a8f709982f
fix(ui-next): Add validation for opacity and border inputs in the segmentation panel - OHIF-2332 (#5819) 2026-02-24 08:50:07 -05:00
Bill Wallace
eeca1f7a7b
fix: palette color 8 encoded 16 (#5823)
* fix: Detect 16 bit when 8 declared

* Update bun lock with dcmjs changes

* PR comments

* Update package versions

* fix: Palette color lookup table data for dcmjs parsed data

* fix: Published version should match (#5813)

* fix: Published version should match

* Move version number update to package.json

* fix: Netlify version number update

* Try updating platform app vesion too

* PR comments

---------

Co-authored-by: Joe Boccanfuso <109477394+jbocce@users.noreply.github.com>

* Update latest cs3d

* formatting

* fix: Use 64k instead of 0 for number of entries

* fix: Revert CS3D version to see test issues

* Updated screenshots for ArrowAnnotate.spec.ts.

* Update CS3D version

* fix: Update cs3d 4.17.4

* Update bun lock

* Update bun

* Downgrade to CS3D 4.17.2 to try to release

---------

Co-authored-by: Joe Boccanfuso <109477394+jbocce@users.noreply.github.com>
Co-authored-by: Joe Boccanfuso <joe.boccanfuso@radicalimaging.com>
2026-02-23 17:24:33 -05:00
Ghadeer Albattarni
cca1a8683b
fix(dicom-tag-browser): Prevent long series names from overlapping - OHIF-2406 (#5809) 2026-02-17 16:56:00 -05:00
Dan Rukas
9a2691a71f
fix(colors): Replaces legacy colors with ui-next colors (#5351)
* Update playwright screenshots and fix broken tests.

---------

Co-authored-by: Joe Boccanfuso <joe.boccanfuso@radicalimaging.com>
2026-02-12 08:48:05 -05:00
Ghadeer Albattarni
7f9e59ee30
fix(app): display study not found message for all modes (#5752)
* fix(app): move study validation to ModeRoute component

- Moved validation from defaultRouteInit.ts to Mode.tsx
- Added dedicated useEffect hook for study validation

* test: add Playwright test for study not found error page across multiple modes
2026-02-09 21:51:44 -05:00
Ghadeer Albattarni
f70c9b932d
fix(cine): prevent crash on second view/hydration of SR series (#5724)
* test: add Playwright test for SR series reload after hydration

* docs: remove Playwright VSCode extension video
2026-02-09 21:20:11 -05:00
Joe Boccanfuso
06612fe177
fix(TMTV): Consider blend mode when adding segmentation representations. OHIF-2416, OHIF-2369 (#5735)
* Updated screenshots for failing tests due to FOV improvements.

---------

Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2026-01-27 08:47:29 -05:00
Joe Boccanfuso
82e6a18735
fix(segmentation): List surface representations in the segmentation table for 3D views. (#5700)
This was done by using an array of representation types instead of a single type for a panel.
The first element of the array is the primary type of the panel, and the rest are secondary types
that can also be displayed in the panel.

PR feedback:
- added test to check number of segments in side panel for 3D only view
- fixed jumping to segment in 3D only view
- fixed exception when adding contour segment in 3D only view
2026-01-13 15:57:44 -05:00
Vinícius Alves de Faria Resende
d917e74e68
tests(Playwright): Full implementation of Page Object Models (POMs) to Playwright tests (#5608) 2025-12-12 11:46:45 -05:00
Vinícius Alves de Faria Resende
bdad2264ed
tests(Playwright): Introduction of Page Object Models (POMs) to Playwright tests (#5557) 2025-11-20 09:29:14 -05:00
Igor Octaviano
9ca02b4071
fix: Remove dead code and fix rectangle roi rehydration (#5490)
* Remove dead code and fix rectangle roi rehydration

* Revert bun.lock

* Remove hardcoded modality

* Add e2e tests

* Update screewnshots

* Adjustments to tests

* disabvle test for now

* Add test again

* Use ohif data soure

* Revert changes

* Test

* Update testdata to include point

* Improve tests

* Update screenshot

---------

Co-authored-by: Andrey Fedorov <andrey.fedorov@gmail.com>
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
2025-11-19 20:04:23 -05:00
Vinícius Alves de Faria Resende
29bd87c8c0
fix(SegmentationTools): [Bug] Changes of brush/eraser radius with hotkey do not reflect on segmentation tool (#5535) 2025-11-05 10:34:41 -05:00
Joe Boccanfuso
35bfc9b0cc
feature(segmentation): Add contour tools and utilities in a side panel (#5517)
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
Co-authored-by: Dan Rukas <dan.rukas@gmail.com>
2025-10-29 14:15:52 -04:00
Vinícius Alves de Faria Resende
76f7d4e23a
fix(3DSegmentation): [Bug] The viewports become blank when loading the seg file in advanced layout after closing the seg file from any other advanced layout (#5505) 2025-10-28 08:52:12 -04:00
Joe Boccanfuso
170e860aa1
fix(segmentation): Lock all rehydrated segmentation segments when panelSegmentation.disableEditing is true. (#5503)
* fix(segmentation): Lock all rehydrated segmentation segments when panelSegmentation.disableEditing is true.

* PR feedback.

* PR feedback.

* Added tests for disableEditing and utilities for simulating drag operations.

* Update bun.lock file after merging master.
2025-10-17 22:14:31 -04:00
devin-ai-integration[bot]
5040c947d2
fix: validation for Percentage of Max SUV input field in TMTV module (#5417)
Co-authored-by: Joe Boccanfuso <joe.boccanfuso@radicalimaging.com>
2025-10-07 14:29:07 -04:00
Vinícius Alves de Faria Resende
74b82bd934
fix(SegmentationService): _getSegmentCenter wrongly handling seg center availability (#5396) 2025-09-19 09:25:32 -04:00
Joe Boccanfuso
cf10e3cf67
chore(tests): update screenshots (#5413) 2025-09-17 15:35:13 -04:00
Martin Bellehumeur, M. Eng.
6fe9df6ec9
feat: Jump to measurement moves the camera if it is not in the viewport (#5023)
Co-authored-by: Joe Boccanfuso <109477394+jbocce@users.noreply.github.com>
Co-authored-by: Bill Wallace <wayfarer3130@gmail.com>
Co-authored-by: Igor Octaviano <igoroctaviano@gmail.com>
2025-08-22 10:30:18 -04:00