* init * more shifting * Move @babel dependencies up to workspace root * Begin updating dependent libraries to use sync'd webpack builds w/ watches * Commit changes before a long weekend * Split packages into platform and extensions * Consolidate how/where we specify file/module type entrypoints * Make it possible to pass in extensions as App props * Resolve viewer's modules * Target for UMD bundle * Add Webpack Stylus loader * Provide WebPack build options for microscopy, vtk, and ui * Better entrypoint for extensions * Push changes up to switch PCs * Fix ESM symlink build for Viewers * Shift docs to root * Specify additional lerna config props * Begin providing basic readme info * Rename example extension folder * Shift links to bottom of doc * First attempt at a netlify deploy preview * Attempt to fix deploy preview build * push workspace enabled to initial command; remove second yarn install; use npx to call gitbook cli commands * Try to use global gitbook-cli * Export node_modules path * More agressive with modifying PATH * Follow deploy log output advice * try again to set bin path * Try swapping bash with a new shell * Try bash -l instead of exec bash * Annd let's try again * and again * We may have figured it out johnny, boy * We need to pull cornerstone-wado-image-loader files from hoisted node_modules * Attempt to fix ticks/escapes * Change copy syntax; try running tests on viewers from root for circleci * Lower version to match circleci image * Try alternative jest-canvas-mock location and version file syntax * Run version command instead of calling node directly * Try alternative jest transform * Set path and enable workspaces * Add codecov flags * Use cpx so our copying finishes? * Get all platform unit tests to run * Run and report individually and in parallel * Try once relying on codecov yaml to split w/ flags * Add projects to split by flags * Generate separate reports * Trigger codecov after everything has finished running; these may not support flags * Use recommended flags from issue comments for codecov * Fix typo * Remove clear flag * Shift back to calling codecov from root * Generate example for codecov issue * Try fixing paths * Simplify * Try using codecov orb * Bump circleci version * Upload core and viewer * Use full string paths * Remove individual codecov calls * Fix dir * Combine files before upload * Escape anchors * tryfix syntax * Escape string literal * Combine lines to reduce path * long paths * Use home alias * Fix filename * Try to see the contents of our cat'd file * Also upload `core` * Try running with aliased folder * Fix path; split PR and Merge unit tests into separate jobs * Set default threshold * Fix typo * Changing to scoped package names * Adding note * Catch more updates * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.0 - @ohif/extension-dicom-html@0.0.4-alpha.0 - @ohif/extension-dicom-microscopy@0.0.9-alpha.0 - @ohif/extension-dicom-pdf@0.0.8-alpha.0 - @ohif/extension-vtk@0.1.4-alpha.0 - @ohif/core@0.11.1-alpha.0 - @ohif/i18n@0.2.3-alpha.0 - @ohif/ui@0.2.18-alpha.0 - @ohif/viewer@0.0.22-alpha.0 * Clean up primary readme * Support for dev and dev:* commands * Shift build command; satisfy default PWA build * Remove old scripts * Clean up UI to set webpack scripts * Tidy up project links * Clean duplicate code in UI project * Update UI project's docs * Clean up ui and i18n config * Reduce duplicate code in `@ohif/core` * Fix @ohif/ui versions * bump @ohif/core versions * Redux testkit dep * Remove unused/duplicate config files for projects/packages * ohif-core --> @ohif/core * Safer publish command * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.1 - @ohif/extension-dicom-html@0.0.4-alpha.1 - @ohif/extension-dicom-microscopy@0.0.9-alpha.1 - @ohif/extension-dicom-pdf@0.0.8-alpha.1 - @ohif/extension-vtk@0.1.4-alpha.1 - @ohif/core@0.11.1-alpha.1 - @ohif/i18n@0.2.3-alpha.1 - @ohif/ui@0.2.18-alpha.1 - @ohif/viewer@0.0.22-alpha.1 * test version bump * Add global prettier config * chore(release): publish %s [skip ci] - @ohif/viewer@0.0.22-alpha.2 * test lerna publish * Update package.jsons * Fix build scripts * catch changes * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.2 - @ohif/extension-dicom-html@0.0.4-alpha.2 - @ohif/extension-dicom-microscopy@0.0.9-alpha.2 - @ohif/extension-dicom-pdf@0.0.8-alpha.2 - @ohif/extension-vtk@0.1.4-alpha.2 - @ohif/core@0.11.1-alpha.2 - @ohif/i18n@0.2.3-alpha.2 - @ohif/ui@0.2.18-alpha.2 - @ohif/viewer@0.0.22-alpha.3 * fix eslint issues caused by eslint 6 and our react-app config * Publish with canary tag * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.3 - @ohif/extension-dicom-html@0.0.4-alpha.3 - @ohif/extension-dicom-microscopy@0.0.9-alpha.3 - @ohif/extension-dicom-pdf@0.0.8-alpha.3 - @ohif/extension-vtk@0.1.4-alpha.3 - @ohif/core@0.11.1-alpha.3 - @ohif/i18n@0.2.3-alpha.3 - @ohif/ui@0.2.18-alpha.3 - @ohif/viewer@0.0.22-alpha.4 * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.4 - @ohif/extension-dicom-html@0.0.4-alpha.4 - @ohif/extension-dicom-microscopy@0.0.9-alpha.4 - @ohif/extension-dicom-pdf@0.0.8-alpha.4 - @ohif/extension-vtk@0.1.4-alpha.4 - @ohif/core@0.11.1-alpha.4 - @ohif/i18n@0.2.3-alpha.4 - @ohif/ui@0.2.18-alpha.4 - @ohif/viewer@0.0.22-alpha.5 * Simplify build * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.5 - @ohif/extension-dicom-html@0.0.4-alpha.5 - @ohif/extension-dicom-microscopy@0.0.9-alpha.5 - @ohif/extension-dicom-pdf@0.0.8-alpha.5 - @ohif/extension-vtk@0.1.4-alpha.5 - @ohif/core@0.11.1-alpha.5 - @ohif/i18n@0.2.3-alpha.5 - @ohif/ui@0.2.18-alpha.5 - @ohif/viewer@0.0.22-alpha.6 * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.6 - @ohif/extension-dicom-html@0.0.4-alpha.6 - @ohif/extension-dicom-microscopy@0.0.9-alpha.6 - @ohif/extension-dicom-pdf@0.0.8-alpha.6 - @ohif/extension-vtk@0.1.4-alpha.6 - @ohif/core@0.11.1-alpha.6 - @ohif/i18n@0.2.3-alpha.6 - @ohif/ui@0.2.18-alpha.6 - @ohif/viewer@0.0.22-alpha.7 * Split version and publish * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.7 - @ohif/extension-dicom-html@0.0.4-alpha.7 - @ohif/extension-dicom-microscopy@0.0.9-alpha.7 - @ohif/extension-dicom-pdf@0.0.8-alpha.7 - @ohif/extension-vtk@0.1.4-alpha.7 - @ohif/core@0.11.1-alpha.7 - @ohif/i18n@0.2.3-alpha.7 - @ohif/ui@0.2.18-alpha.7 - @ohif/viewer@0.0.22-alpha.8 * Try simplify netlify build * react-viewerbase --> @ohif/ui * add test for stylus loader * Try new way to specify publish path * Use an output folder that won't be ignored * Try move command * fiddle with paths * Dig for some information * Make sure we're in root for our commands * Remove discovery * Setup script-tag example * Fix typo * Move config folder * Update cornerstone extension to use shared/root webpack configs * capture changes * Update extension webpack configs * Don't check in docz output * Fix babel runtime resolution issue * Simplify ui build steps * Push in progress * Shift directories * Get viewer dev path to work * Fix viewer commonjs build * Fix build pwa config for viewers * Make sure our package specific command can be called from root * Update notes * Fix imports and misc. merge notes * Bump wado-image-loader version * Switch up commands to remove webworkers copy * Fix CI config * Fix more broken package references * Add react-dropzone * Persist so e2e test can use * Fix lockfile * Use cypress orb to simplify CI * Fix config * Try again * Install yarn latest for orb * Install yarn a different way * Wait on correct port * Run tests in viewer project * Fix cypress config * Make Cypress happier - use default location * Simplify e2e testing * Capture UI changes since fork * Catch core up * Grab latest deps after merge * Fix broken import * Make sure cornerstone-wado-image-loader resolves to 3+ * Note regarding orbs * Fix refresh on 404 routes * Fix odd error for cornerstone-wado-image-loader * Different target for UMD * Simplify dev script * Try to get fancy with netlify output * Let's do it again * Try to fix measurementTools issue * See if we can get our lerna magic to work on merge to monorepo branch
138 lines
6.3 KiB
Markdown
138 lines
6.3 KiB
Markdown
<!-- prettier-ignore-start -->
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<!-- markdownlint-disable -->
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<div align="center">
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<h1>@ohif/core</h1>
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<p><strong>@ohif/core</strong> is a collection of useful functions and classes for building web-based medical imaging applications. This library helps power OHIF's <a href="https://github.com/OHIF/Viewers">zero-footprint DICOM viewer</a>.</p>
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</div>
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<hr />
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[![NPM version][npm-version-image]][npm-url]
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[![NPM downloads][npm-downloads-image]][npm-url]
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[](#contributors)
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[![MIT License][license-image]][license-url]
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<!-- markdownlint-enable -->
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<!-- prettier-ignore-end -->
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## Why?
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This library offers pre-packaged solutions for features common to Web-based
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medical imaging viewers. For example:
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- Hotkeys
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- DICOM Web
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- Hanging Protocols
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- Managing a study's measurements
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- Managing a study's DICOM metadata
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- A flexible pattern for extensions
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- And many others
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It does this while remaining decoupled from any particular view library or
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rendering logic. While we use it to power our [React Viewer][react-viewer], it
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can be used with Vue, React, Vanilla JS, or any number of other frameworks.
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## Getting Started
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The documentation for this library is sparse. The best way to get started is to
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look at its
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[top level exports](https://github.com/OHIF/ohif-core/blob/master/src/index.js),
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and explore the source code of features that interest you. If you want to see
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how we use this library, you can check out [our viewer
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implementation][react-viewer].
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### Install
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> This library is pre- v1.0. All realeases until a v1.0 have the possibility of
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> introducing breaking changes. Please depend on an "exact" version in your
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> projects to prevent issues caused by loose versioning.
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```
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// with npm
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npm i @ohif/core --save-exact
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// with yarn
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yarn add @ohif/core --exact
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```
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### Usage
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Usage is dependent on the feature(s) you want to leverage. The bulk of
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`ohif-core`'s features are "pure" and can be imported and used in place.
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_Example: retrieving study metadata from a server_
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```js
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import { studies } from "@ohif/core";
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const studiesMetadata = await studies.retrieveStudiesMetadata(
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server, // Object
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studyInstanceUids, // Array
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seriesInstanceUids // Array (optional)
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);
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```
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### Contributing
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It is notoriously difficult to setup multiple dependent repositories for
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end-to-end testing and development. That's why we recommend writing and running
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unit tests when adding and modifying features for this library. This allows us
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to program in isolation without a complex setup, and has the added benefit of
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producing well-tested business logic.
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1. Clone this repository
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2. Navigate to the project directory, and `yarn install`
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3. To begin making changes, `yarn run dev`
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4. To commit changes, run `yarn run cm`
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When creating tests, place the test file "next to" the file you're testing.
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[For example](https://github.com/OHIF/ohif-core/blob/master/src/index.test.js):
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```js
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// File
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index.js;
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// Test for file
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index.test.js;
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```
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As you add and modify code, `jest` will watch for uncommitted changes and run
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your tests, reporting the results to your terminal. Make a pull request with
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your changes to `master`, and a core team member will review your work. If you
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have any questions, please don't hesitate to reach out via a GitHub issue.
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## Contributors
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Thanks goes to these wonderful people
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([emoji key](https://allcontributors.org/docs/en/emoji-key)):
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<!-- ALL-CONTRIBUTORS-LIST:START - Do not remove or modify this section -->
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<!-- prettier-ignore -->
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<table><tr><td align="center"><a href="https://github.com/swederik"><img src="https://avatars3.githubusercontent.com/u/607793?v=4" width="100px;" alt="Erik Ziegler"/><br /><sub><b>Erik Ziegler</b></sub></a><br /><a href="https://github.com/OHIF/ohif-core/commits?author=swederik" title="Code">💻</a></td><td align="center"><a href="https://github.com/evren217"><img src="https://avatars1.githubusercontent.com/u/4920551?v=4" width="100px;" alt="Evren Ozkan"/><br /><sub><b>Evren Ozkan</b></sub></a><br /><a href="https://github.com/OHIF/ohif-core/commits?author=evren217" title="Code">💻</a></td><td align="center"><a href="https://github.com/galelis"><img src="https://avatars3.githubusercontent.com/u/2378326?v=4" width="100px;" alt="Gustavo André Lelis"/><br /><sub><b>Gustavo André Lelis</b></sub></a><br /><a href="https://github.com/OHIF/ohif-core/commits?author=galelis" title="Code">💻</a></td><td align="center"><a href="http://dannyrb.com/"><img src="https://avatars1.githubusercontent.com/u/5797588?v=4" width="100px;" alt="Danny Brown"/><br /><sub><b>Danny Brown</b></sub></a><br /><a href="https://github.com/OHIF/ohif-core/commits?author=dannyrb" title="Code">💻</a></td><td align="center"><a href="https://github.com/all-contributors/all-contributors-bot"><img src="https://avatars3.githubusercontent.com/u/46843839?v=4" width="100px;" alt="allcontributors[bot]"/><br /><sub><b>allcontributors[bot]</b></sub></a><br /><a href="https://github.com/OHIF/ohif-core/commits?author=allcontributors" title="Documentation">📖</a></td><td align="center"><a href="https://github.com/ivan-aksamentov"><img src="https://avatars0.githubusercontent.com/u/9403403?v=4" width="100px;" alt="Ivan Aksamentov"/><br /><sub><b>Ivan Aksamentov</b></sub></a><br /><a href="https://github.com/OHIF/ohif-core/commits?author=ivan-aksamentov" title="Code">💻</a> <a href="https://github.com/OHIF/ohif-core/commits?author=ivan-aksamentov" title="Tests">⚠️</a></td></tr></table>
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<!-- ALL-CONTRIBUTORS-LIST:END -->
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This project follows the
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[all-contributors](https://github.com/all-contributors/all-contributors)
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specification. Contributions of any kind welcome!
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## License
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MIT © [OHIF](https://github.com/OHIF)
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<!--
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Links:
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-->
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<!-- prettier-ignore-start -->
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<!-- ROW -->
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[npm-url]: https://npmjs.org/package/ohif-core
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[npm-downloads-image]: https://img.shields.io/npm/dm/ohif-core.svg?style=flat-square
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[npm-version-image]: https://img.shields.io/npm/v/ohif-core.svg?style=flat-square
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[all-contributors-image]: https://img.shields.io/badge/all_contributors-0-orange.svg?style=flat-square
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[contributing-url]: https://github.com/OHIF/ohif-core/blob/master/CONTRIBUTING.md
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[license-image]: https://img.shields.io/badge/license-MIT-blue.svg?style=flat-square
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[license-url]: LICENSE
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<!-- Misc. -->
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[react-viewer]: https://github.com/OHIF/Viewers/tree/react
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<!-- prettier-ignore-end -->
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