* init * more shifting * Move @babel dependencies up to workspace root * Begin updating dependent libraries to use sync'd webpack builds w/ watches * Commit changes before a long weekend * Split packages into platform and extensions * Consolidate how/where we specify file/module type entrypoints * Make it possible to pass in extensions as App props * Resolve viewer's modules * Target for UMD bundle * Add Webpack Stylus loader * Provide WebPack build options for microscopy, vtk, and ui * Better entrypoint for extensions * Push changes up to switch PCs * Fix ESM symlink build for Viewers * Shift docs to root * Specify additional lerna config props * Begin providing basic readme info * Rename example extension folder * Shift links to bottom of doc * First attempt at a netlify deploy preview * Attempt to fix deploy preview build * push workspace enabled to initial command; remove second yarn install; use npx to call gitbook cli commands * Try to use global gitbook-cli * Export node_modules path * More agressive with modifying PATH * Follow deploy log output advice * try again to set bin path * Try swapping bash with a new shell * Try bash -l instead of exec bash * Annd let's try again * and again * We may have figured it out johnny, boy * We need to pull cornerstone-wado-image-loader files from hoisted node_modules * Attempt to fix ticks/escapes * Change copy syntax; try running tests on viewers from root for circleci * Lower version to match circleci image * Try alternative jest-canvas-mock location and version file syntax * Run version command instead of calling node directly * Try alternative jest transform * Set path and enable workspaces * Add codecov flags * Use cpx so our copying finishes? * Get all platform unit tests to run * Run and report individually and in parallel * Try once relying on codecov yaml to split w/ flags * Add projects to split by flags * Generate separate reports * Trigger codecov after everything has finished running; these may not support flags * Use recommended flags from issue comments for codecov * Fix typo * Remove clear flag * Shift back to calling codecov from root * Generate example for codecov issue * Try fixing paths * Simplify * Try using codecov orb * Bump circleci version * Upload core and viewer * Use full string paths * Remove individual codecov calls * Fix dir * Combine files before upload * Escape anchors * tryfix syntax * Escape string literal * Combine lines to reduce path * long paths * Use home alias * Fix filename * Try to see the contents of our cat'd file * Also upload `core` * Try running with aliased folder * Fix path; split PR and Merge unit tests into separate jobs * Set default threshold * Fix typo * Changing to scoped package names * Adding note * Catch more updates * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.0 - @ohif/extension-dicom-html@0.0.4-alpha.0 - @ohif/extension-dicom-microscopy@0.0.9-alpha.0 - @ohif/extension-dicom-pdf@0.0.8-alpha.0 - @ohif/extension-vtk@0.1.4-alpha.0 - @ohif/core@0.11.1-alpha.0 - @ohif/i18n@0.2.3-alpha.0 - @ohif/ui@0.2.18-alpha.0 - @ohif/viewer@0.0.22-alpha.0 * Clean up primary readme * Support for dev and dev:* commands * Shift build command; satisfy default PWA build * Remove old scripts * Clean up UI to set webpack scripts * Tidy up project links * Clean duplicate code in UI project * Update UI project's docs * Clean up ui and i18n config * Reduce duplicate code in `@ohif/core` * Fix @ohif/ui versions * bump @ohif/core versions * Redux testkit dep * Remove unused/duplicate config files for projects/packages * ohif-core --> @ohif/core * Safer publish command * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.1 - @ohif/extension-dicom-html@0.0.4-alpha.1 - @ohif/extension-dicom-microscopy@0.0.9-alpha.1 - @ohif/extension-dicom-pdf@0.0.8-alpha.1 - @ohif/extension-vtk@0.1.4-alpha.1 - @ohif/core@0.11.1-alpha.1 - @ohif/i18n@0.2.3-alpha.1 - @ohif/ui@0.2.18-alpha.1 - @ohif/viewer@0.0.22-alpha.1 * test version bump * Add global prettier config * chore(release): publish %s [skip ci] - @ohif/viewer@0.0.22-alpha.2 * test lerna publish * Update package.jsons * Fix build scripts * catch changes * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.2 - @ohif/extension-dicom-html@0.0.4-alpha.2 - @ohif/extension-dicom-microscopy@0.0.9-alpha.2 - @ohif/extension-dicom-pdf@0.0.8-alpha.2 - @ohif/extension-vtk@0.1.4-alpha.2 - @ohif/core@0.11.1-alpha.2 - @ohif/i18n@0.2.3-alpha.2 - @ohif/ui@0.2.18-alpha.2 - @ohif/viewer@0.0.22-alpha.3 * fix eslint issues caused by eslint 6 and our react-app config * Publish with canary tag * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.3 - @ohif/extension-dicom-html@0.0.4-alpha.3 - @ohif/extension-dicom-microscopy@0.0.9-alpha.3 - @ohif/extension-dicom-pdf@0.0.8-alpha.3 - @ohif/extension-vtk@0.1.4-alpha.3 - @ohif/core@0.11.1-alpha.3 - @ohif/i18n@0.2.3-alpha.3 - @ohif/ui@0.2.18-alpha.3 - @ohif/viewer@0.0.22-alpha.4 * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.4 - @ohif/extension-dicom-html@0.0.4-alpha.4 - @ohif/extension-dicom-microscopy@0.0.9-alpha.4 - @ohif/extension-dicom-pdf@0.0.8-alpha.4 - @ohif/extension-vtk@0.1.4-alpha.4 - @ohif/core@0.11.1-alpha.4 - @ohif/i18n@0.2.3-alpha.4 - @ohif/ui@0.2.18-alpha.4 - @ohif/viewer@0.0.22-alpha.5 * Simplify build * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.5 - @ohif/extension-dicom-html@0.0.4-alpha.5 - @ohif/extension-dicom-microscopy@0.0.9-alpha.5 - @ohif/extension-dicom-pdf@0.0.8-alpha.5 - @ohif/extension-vtk@0.1.4-alpha.5 - @ohif/core@0.11.1-alpha.5 - @ohif/i18n@0.2.3-alpha.5 - @ohif/ui@0.2.18-alpha.5 - @ohif/viewer@0.0.22-alpha.6 * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.6 - @ohif/extension-dicom-html@0.0.4-alpha.6 - @ohif/extension-dicom-microscopy@0.0.9-alpha.6 - @ohif/extension-dicom-pdf@0.0.8-alpha.6 - @ohif/extension-vtk@0.1.4-alpha.6 - @ohif/core@0.11.1-alpha.6 - @ohif/i18n@0.2.3-alpha.6 - @ohif/ui@0.2.18-alpha.6 - @ohif/viewer@0.0.22-alpha.7 * Split version and publish * chore(release): publish %s [skip ci] - @ohif/extension-cornerstone@0.0.39-alpha.7 - @ohif/extension-dicom-html@0.0.4-alpha.7 - @ohif/extension-dicom-microscopy@0.0.9-alpha.7 - @ohif/extension-dicom-pdf@0.0.8-alpha.7 - @ohif/extension-vtk@0.1.4-alpha.7 - @ohif/core@0.11.1-alpha.7 - @ohif/i18n@0.2.3-alpha.7 - @ohif/ui@0.2.18-alpha.7 - @ohif/viewer@0.0.22-alpha.8 * Try simplify netlify build * react-viewerbase --> @ohif/ui * add test for stylus loader * Try new way to specify publish path * Use an output folder that won't be ignored * Try move command * fiddle with paths * Dig for some information * Make sure we're in root for our commands * Remove discovery * Setup script-tag example * Fix typo * Move config folder * Update cornerstone extension to use shared/root webpack configs * capture changes * Update extension webpack configs * Don't check in docz output * Fix babel runtime resolution issue * Simplify ui build steps * Push in progress * Shift directories * Get viewer dev path to work * Fix viewer commonjs build * Fix build pwa config for viewers * Make sure our package specific command can be called from root * Update notes * Fix imports and misc. merge notes * Bump wado-image-loader version * Switch up commands to remove webworkers copy * Fix CI config * Fix more broken package references * Add react-dropzone * Persist so e2e test can use * Fix lockfile * Use cypress orb to simplify CI * Fix config * Try again * Install yarn latest for orb * Install yarn a different way * Wait on correct port * Run tests in viewer project * Fix cypress config * Make Cypress happier - use default location * Simplify e2e testing * Capture UI changes since fork * Catch core up * Grab latest deps after merge * Fix broken import * Make sure cornerstone-wado-image-loader resolves to 3+ * Note regarding orbs * Fix refresh on 404 routes * Fix odd error for cornerstone-wado-image-loader * Different target for UMD * Simplify dev script * Try to get fancy with netlify output * Let's do it again * Try to fix measurementTools issue * See if we can get our lerna magic to work on merge to monorepo branch
234 lines
11 KiB
Markdown
234 lines
11 KiB
Markdown
<!-- prettier-ignore-start -->
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<!-- markdownlint-disable -->
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<div align="center">
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<h1>@ohif/viewer</h1>
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<p><strong>@ohif/viewer</strong> is a zero-footprint medical image viewer provided by the <a href="http://ohif.org/">Open Health Imaging Foundation (OHIF)</a>. It is a configurable and extensible progressive web application with out-of-the-box support for image archives which support <a href="https://www.dicomstandard.org/dicomweb/">DICOMweb</a>.</p>
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</div>
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<div align="center">
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<a href="https://docs.ohif.org/"><strong>Read The Docs</strong></a> |
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<a href="https://github.com/OHIF/Viewers/tree/master/docs/latest">Edit the docs</a>
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</div>
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<div align="center">
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<a href="https://docs.ohif.org/demo">Demo</a> |
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<a href="https://ohif.canny.io/">Roadmap</a> |
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<a href="https://react.ohif.org/">Component Library</a>
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</div>
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<hr />
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[![NPM version][npm-version-image]][npm-url]
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[![NPM downloads][npm-downloads-image]][npm-url]
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[![Pulls][docker-pulls-img]][docker-image-url]
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[](#contributors)
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[![MIT License][license-image]][license-url]
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<!-- markdownlint-enable -->
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<!-- prettier-ignore-end -->
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> ATTENTION: If you are looking for Version 1 (the Meteor Version) of this
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> repository, it lives on
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> [the `v1.x` branch](https://github.com/OHIF/Viewers/tree/v1.x)
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## Why?
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Building a web based medical imaging viewer from scratch is time intensive, hard
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to get right, and expensive. Instead of re-inventing the wheel, you can use the
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OHIF Viewer as a rock solid platform to build on top of. The Viewer is a
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[React][react-url] [Progressive Web Application][pwa-url] that can be embedded
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in existing applications via it's [packaged source
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(ohif-viewer)][ohif-viewer-url] or hosted stand-alone. The Viewer exposes
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[configuration][configuration-url] and [extensions][extensions-url] to support
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workflow customization and advanced functionality at common integration points.
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If you're interested in using the OHIF Viewer, but you're not sure it supports
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your use case [check out our docs](https://docs.ohif.org/). Still not sure, or
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you would like to propose new features? Don't hesitate to
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[create an issue](https://github.com/OHIF/Viewers/issues) or open a pull
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request.
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## Getting Started
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This readme is specific to testing and developing locally. If you're more
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interested in production deployment strategies,
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[you can check out our documentation on publishing](https://docs.ohif.org/).
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Want to play around before you dig in?
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[Check out our LIVE Demo](https://viewer.ohif.org/)
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### Setup
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_Requirements:_
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- [NodeJS & NPM](https://nodejs.org/en/download/)
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- [Yarn](https://yarnpkg.com/lang/en/docs/install/)
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_Steps:_
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1. Fork this repository
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2. Clone your forked repository (your `origin`)
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- `git clone git@github.com:YOUR_GITHUB_USERNAME/Viewers.git`
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3. Add `OHIF/Viewers` as a `remote` repository (the `upstream`)
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- `git remote add upstream git@github.com:OHIF/Viewers.git`
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### Developing Locally
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In your cloned repository's root folder, run:
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```js
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// Restore dependencies
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yarn install
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// Stands up local server to host Viewer.
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// Viewer connects to our public cloud PACS by default
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yarn start
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```
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For more advanced local development scenarios, like using your own locally
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hosted PACS and test data,
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[check out our Essential: Getting Started](https://docs.ohif.org/essentials/getting-started.html)
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guide.
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### E2E Tests
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Using [Cypress](https://www.cypress.io/) to create End-to-End tests and check whether the application flow is performing correctly, ensuring that the integrated components are working as expected.
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#### Why Cypress?
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Cypress is a next generation front end testing tool built for the modern web.
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With Cypress is easy to set up, write, run and debug tests
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It allow us to write different types of tests:
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- End-to-End tests
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- Integration tests
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- Unit tets
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All tests must be in `./cypress/integration` folder.
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Commands to run the tests:
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```js
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// Open Cypress Dashboard that provides insight into what happened when your tests ran
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yarn run cy
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// Run all tests using Electron browser headless
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yarn run cy:run
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// Run all tests in CI mode
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yarn run cy:run:ci
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```
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### Contributing
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> Large portions of the Viewer's functionality are maintained in other
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> repositories. To get a better understanding of the Viewer's architecture and
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> "where things live", read
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> [our docs on the Viewer's architecture](https://docs.ohif.org/advanced/architecture.html#diagram)
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It is notoriously difficult to setup multiple dependent repositories for
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end-to-end testing and development. That's why we recommend writing and running
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unit tests when adding and modifying features. This allows us to program in
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isolation without a complex setup, and has the added benefit of producing
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well-tested business logic.
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1. Clone this repository
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2. Navigate to the project directory, and `yarn install`
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3. To begin making changes, `yarn run dev`
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4. To commit changes, run `yarn run cm`
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When creating tests, place the test file "next to" the file you're testing.
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[For example](https://github.com/OHIF/Viewers/blob/master/src/utils/index.test.js):
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```js
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// File
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index.js
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// Test for file
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index.test.js
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```
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As you add and modify code, `jest` will watch for uncommitted changes and run
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your tests, reporting the results to your terminal. Make a pull request with
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your changes to `master`, and a core team member will review your work. If you
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have any questions, please don't hesitate to reach out via a GitHub issue.
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## Roadmap
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If you want to know what's planned for the very near future,
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[check out our roadmap](https://ohif.canny.io/). The best way to influence when
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and what is worked on is to contribute to the conversation by creating GitHub
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issues, and contributing code through pull requests. OHIF's high level
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priorities for the near future are:
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- Feature parity with version 1
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- Extension and configuration improvements with key integration partners
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- Continued Developer Experience Improvements
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- Segmentation Tools, and improved VTK.js support
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More granular information will make it's way to the backlog as these items
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become scoped for development by core maintainers.
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> Don't hesitate to ask questions, propose features, or create pull requests.
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> We're here, we're listening, and we're ready to build the best open source
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> medical imaging viewer on the web.
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#### Roadmap Generously Powered by Canny.io
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<a href="https://ohif.canny.io/">
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<img height="30" src="docs/latest/assets/img/canny-full.png" />
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</a>
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## Contributors
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Thanks goes to these wonderful people
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([emoji key](https://allcontributors.org/docs/en/emoji-key)):
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<!-- ALL-CONTRIBUTORS-LIST:START - Do not remove or modify this section -->
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<!-- prettier-ignore -->
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<table><tr><td align="center"><a href="https://github.com/swederik"><img src="https://avatars3.githubusercontent.com/u/607793?v=4" width="100px;" alt="Erik Ziegler"/><br /><sub><b>Erik Ziegler</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=swederik" title="Code">💻</a> <a href="#infra-swederik" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a></td><td align="center"><a href="https://github.com/evren217"><img src="https://avatars1.githubusercontent.com/u/4920551?v=4" width="100px;" alt="Evren Ozkan"/><br /><sub><b>Evren Ozkan</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=evren217" title="Code">💻</a></td><td align="center"><a href="https://github.com/galelis"><img src="https://avatars3.githubusercontent.com/u/2378326?v=4" width="100px;" alt="Gustavo André Lelis"/><br /><sub><b>Gustavo André Lelis</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=galelis" title="Code">💻</a></td><td align="center"><a href="http://dannyrb.com/"><img src="https://avatars1.githubusercontent.com/u/5797588?v=4" width="100px;" alt="Danny Brown"/><br /><sub><b>Danny Brown</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=dannyrb" title="Code">💻</a> <a href="#infra-dannyrb" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a></td><td align="center"><a href="https://github.com/all-contributors/all-contributors-bot"><img src="https://avatars3.githubusercontent.com/u/46843839?v=4" width="100px;" alt="allcontributors[bot]"/><br /><sub><b>allcontributors[bot]</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=allcontributors" title="Documentation">📖</a></td><td align="center"><a href="https://www.linkedin.com/in/siliconvalleynextgeneration/"><img src="https://avatars0.githubusercontent.com/u/1230575?v=4" width="100px;" alt="Esref Durna"/><br /><sub><b>Esref Durna</b></sub></a><br /><a href="#question-EsrefDurna" title="Answering Questions">💬</a></td><td align="center"><a href="https://github.com/diego0020"><img src="https://avatars3.githubusercontent.com/u/7297450?v=4" width="100px;" alt="diego0020"/><br /><sub><b>diego0020</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=diego0020" title="Code">💻</a></td></tr><tr><td align="center"><a href="https://github.com/dlwire"><img src="https://avatars3.githubusercontent.com/u/1167291?v=4" width="100px;" alt="David Wire"/><br /><sub><b>David Wire</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=dlwire" title="Code">💻</a></td><td align="center"><a href="https://github.com/jfmedeiros1820"><img src="https://avatars1.githubusercontent.com/u/2211708?v=4" width="100px;" alt="João Felipe de Medeiros Moreira"/><br /><sub><b>João Felipe de Medeiros Moreira</b></sub></a><br /><a href="https://github.com/OHIF/Viewers/commits?author=jfmedeiros1820" title="Tests">⚠️</a></td></tr></table>
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<!-- ALL-CONTRIBUTORS-LIST:END -->
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This project follows the
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[all-contributors](https://github.com/all-contributors/all-contributors)
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specification. Contributions of any kind welcome!
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## License
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MIT © [OHIF](https://github.com/OHIF)
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<!--
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Links:
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-->
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<!-- prettier-ignore-start -->
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[npm-url]: https://npmjs.org/package/ohif-viewer
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[npm-downloads-image]: https://img.shields.io/npm/dm/ohif-viewer.svg?style=flat-square
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[npm-version-image]: https://img.shields.io/npm/v/ohif-viewer.svg?style=flat-square
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[docker-pulls-img]: https://img.shields.io/docker/pulls/ohif/viewer.svg?style=flat-square
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[docker-image-url]: https://hub.docker.com/r/ohif/viewer
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[all-contributors-image]: https://img.shields.io/badge/all_contributors-0-orange.svg?style=flat-square
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[contributing-url]: https://github.com/OHIF/Viewers/blob/react/CONTRIBUTING.md
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[license-image]: https://img.shields.io/badge/license-MIT-blue.svg?style=flat-square
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[license-url]: LICENSE
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<!-- DOCS -->
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[react-url]: https://reactjs.org/
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[pwa-url]: https://developers.google.com/web/progressive-web-apps/
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[ohif-viewer-url]: https://www.npmjs.com/package/ohif-viewer
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[configuration-url]: https://docs.ohif.org/essentials/configuration.html
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[extensions-url]: https://docs.ohif.org/advanced/extensions.html
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<!-- Misc. -->
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[react-viewer]: https://github.com/OHIF/Viewers/tree/react
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<!-- Issue Boilerplate -->
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[bugs]: https://github.com/OHIF/Viewers/labels/bug
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[requests-feature]: https://github.com/OHIF/Viewers/labels/enhancement
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[good-first-issue]: https://github.com/OHIF/Viewers/labels/good%20first%20issue
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[google-group]: https://groups.google.com/forum/#!forum/cornerstone-platform
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<!-- prettier-ignore-end -->
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