171 lines
6.2 KiB
Markdown
171 lines
6.2 KiB
Markdown
# Data Source
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After following the steps outlined in
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[Getting Started](./../development/getting-started.md), you'll notice that the
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OHIF Viewer has data for several studies and their images. You didn't add this
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data, so where is it coming from?
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By default, the viewer is configured to connect to a remote server hosted by the
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nice folks over at [dcmjs.org][dcmjs-org]. While convenient for getting started,
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the time may come when you want to develop using your own data either locally or
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remotely.
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## Set up a local DICOM server
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> ATTENTION! Already have a remote or local server? Skip to the
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> [configuration section](#configuration-learn-more) below.
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While the OHIF Viewer can work with any data source, the easiest to configure
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are the ones that follow the [DICOMWeb][dicom-web] spec.
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1. Choose and install an Image Archive
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2. Upload data to your archive (e.g. with DCMTK's [storescu][storescu] or your
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archive's web interface)
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3. Keep the server running
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For our purposes, we will be using `Orthanc`, but you can see a list of
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[other Open Source options](#open-source-dicom-image-archives) below.
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### Requirements
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- Docker
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- [Docker for Mac](https://docs.docker.com/docker-for-mac/)
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- [Docker for Windows (recommended)](https://docs.docker.com/docker-for-windows/)
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- [Docker Toolbox for Windows](https://docs.docker.com/toolbox/toolbox_install_windows/)
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_Not sure if you have `docker` installed already? Try running `docker --version`
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in command prompt or terminal_
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> If you are using `Docker Toolbox` you need to change the _PROXY_DOMAIN_
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> parameter in _platform/viewer/package.json_ to http://192.168.99.100:8042 or
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> the ip docker-machine ip throws. This is the value [`WebPack`][webpack-proxy]
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> uses to proxy requests
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### Running Orthanc
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_Start Orthanc:_
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```bash
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# Runs orthanc so long as window remains open
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yarn run orthanc:up
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```
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_Upload your first Study:_
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1. Navigate to
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[Orthanc's web interface](http://localhost:8042/app/explorer.html) at
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`http://localhost:8042/app/explorer.html` in a web browser.
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2. In the top right corner, click "Upload"
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3. Click "Select files to upload..." and select one or more DICOM files
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4. Click "Start the upload"
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#### Orthanc: Learn More
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You can see the `docker-compose.yml` file this command runs at
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[`<project-root>/.docker/Nginx-Orthanc/`][orthanc-docker-compose], and more on
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Orthanc for Docker in [Orthanc's documentation][orthanc-docker].
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### Connecting to Orthanc
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Now that we have a local Orthanc instance up and running, we need to configure
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our web application to connect to it. Open a new terminal window, navigate to
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this repository's root directory, and run:
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```bash
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# If you haven't already, enable yarn workspaces
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yarn config set workspaces-experimental true
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# Restore dependencies
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yarn install
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# Run our dev command, but with the local orthanc config
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yarn run dev:orthanc
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```
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#### Configuration: Learn More
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> For more configuration fun, check out the
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> [Essentials Configuration](./index.md) guide.
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Let's take a look at what's going on under the hood here. `yarn run dev:orthanc`
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is running the `dev:orthanc` script in our project's `package.json`. That script
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is:
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```js
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cross-env NODE_ENV=development PROXY_TARGET=/dicom-web PROXY_DOMAIN=http://localhost:8042 APP_CONFIG=config/docker_nginx-orthanc.js webpack-dev-server --config .webpack/webpack.pwa.js -w
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```
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- `cross-env` sets three environment variables
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- PROXY_TARGET: `/dicom-web`
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- PROXY_DOMAIN: `http://localhost:8042`
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- APP_CONFIG: `config/docker_nginx-orthanc.js`
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- `webpack-dev-server` runs using the `.webpack/webpack.pwa.js` configuration
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file. It will watch for changes and update as we develop.
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`PROXY_TARGET` and `PROXY_DOMAIN` tell our development server to proxy requests
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to `Orthanc`. This allows us to bypass CORS issues that normally occur when
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requesting resources that live at a different domain.
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The `APP_CONFIG` value tells our app which file to load on to `window.config`.
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By default, our app uses the file at
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`<project-root>/platform/viewer/public/config/default.js`. Here is what that
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configuration looks like:
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```js
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window.config = {
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routerBasename: '/',
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servers: {
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dicomWeb: [
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{
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name: 'Orthanc',
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wadoUriRoot: 'http://localhost:8899/wado',
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qidoRoot: 'http://localhost:8899/dicom-web',
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wadoRoot: 'http://localhost:8899/dicom-web',
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qidoSupportsIncludeField: false,
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imageRendering: 'wadors',
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thumbnailRendering: 'wadors',
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},
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],
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},
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};
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```
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To learn more about how you can configure the OHIF Viewer, check out our
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[Configuration Guide](./index.md).
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## Open Source DICOM Image Archives
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Our example uses `Orthanc`, but there are a lot of options available to you.
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Here are some of the more popular ones:
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| Archive | Installation |
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| --------------------------------------------- | ---------------------------------- |
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| [DCM4CHEE Archive 5.x][dcm4chee] | [W/ Docker][dcm4chee-docker] |
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| [Orthanc][orthanc] | [W/ Docker][orthanc-docker] |
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| [DICOMcloud][dicomcloud] (**DICOM Web only**) | [Installation][dicomcloud-install] |
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| [OsiriX][osirix] (**Mac OSX only**) | Desktop Client |
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| [Horos][horos] (**Mac OSX only**) | Desktop Client |
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_Feel free to make a Pull Request if you want to add to this list._
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<!--
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Links
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-->
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<!-- prettier-ignore-start -->
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[dcmjs-org]: https://server.dcmjs.org/dcm4chee-arc/aets/DCM4CHEE/wado
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[dicom-web]: https://en.wikipedia.org/wiki/DICOMweb
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[storescu]: http://support.dcmtk.org/docs/storescu.html
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[webpack-proxy]: https://webpack.js.org/configuration/dev-server/#devserverproxy
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[orthanc-docker-compose]: https://github.com/OHIF/Viewers/tree/master/.docker/Nginx-Orthanc
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<!-- Archives -->
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[dcm4chee]: https://github.com/dcm4che/dcm4chee-arc-light
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[dcm4chee-docker]: https://github.com/dcm4che/dcm4chee-arc-light/wiki/Running-on-Docker
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[orthanc]: https://www.orthanc-server.com/
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[orthanc-docker]: http://book.orthanc-server.com/users/docker.html
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[dicomcloud]: https://github.com/DICOMcloud/DICOMcloud
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[dicomcloud-install]: https://github.com/DICOMcloud/DICOMcloud#running-the-code
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[osirix]: http://www.osirix-viewer.com/
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[horos]: https://www.horosproject.org/
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<!-- prettier-ignore-end -->
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