Commit Graph
188 Commits
Author SHA1 Message Date
ohif-bot ea0963d75f chore(release): publish [skip ci]
- @ohif/extension-dicom-rt@0.6.14
 - @ohif/extension-dicom-segmentation@0.6.11
 - @ohif/extension-vtk@1.11.16
 - @ohif/core@2.13.15
 - @ohif/ui@1.9.3
 - @ohif/viewer@4.9.24
2021-09-03 21:01:01 +00:00
igoroctaviano 3f40cdced7 Add badge numbers for seg and rtstruct 2021-07-28 22:15:05 -03:00
ohif-bot f0d13a7acd chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.10.8
 - @ohif/extension-dicom-rt@0.6.12
 - @ohif/extension-dicom-segmentation@0.6.9
 - @ohif/extension-vtk@1.11.12
 - @ohif/core@2.13.11
 - @ohif/ui@1.9.2
 - @ohif/viewer@4.9.17
2021-05-17 16:51:58 +00:00
Davide Punzo 78f1a7f3e5 Re #2259: UI refinements for warnings (#2397)
* Re #2259: highlight series thumbnails border for active series (series in the active viewport)
* Re #2259: add the warning icon also on the active viewport as an overlay
2021-05-17 18:48:32 +02:00
ohif-bot 3296ffaa07 chore(release): publish [skip ci]
- @ohif/extension-vtk@1.11.4
 - @ohif/core@2.13.3
 - @ohif/ui@1.9.1
 - @ohif/viewer@4.9.6
2021-03-26 10:35:50 +00:00
Davide Punzo 0456d92462 IDC 2259: add warning UI for series inconsistencies (#2331)
IDC 2259: add warning UI for series inconsistencies

remove VTKMPRToolbarButton component memoization (it is not anymore necessary)
2021-03-26 11:32:10 +01:00
ohif-bot bdecbfeee3 chore(release): publish [skip ci]
- @ohif/extension-debugging@0.2.0
 - @ohif/extension-dicom-microscopy@0.52.0
 - @ohif/extension-dicom-segmentation@0.6.0
 - @ohif/extension-vtk@1.11.0
 - @ohif/core@2.13.0
 - @ohif/ui@1.9.0
 - @ohif/viewer@4.9.0
2021-03-04 21:44:04 +00:00
igoroctaviano 8581405352 Add logger to viewport grid 2021-03-04 18:20:57 -03:00
igoroctaviano e983b02677 Add onerror event to cover all other unhandled errors 2021-03-03 19:16:49 -03:00
igoroctaviano 14d6454eaf feat(log): add new log service 2021-02-25 18:29:28 -03:00
ohif-bot ea6842a276 chore(release): publish [skip ci]
- @ohif/extension-dicom-tag-browser@0.2.2
 - @ohif/extension-vtk@1.10.4
 - @ohif/core@2.12.3
 - @ohif/ui@1.8.2
 - @ohif/viewer@4.8.9
2021-02-05 20:03:45 +00:00
igoroctaviano ef341d1518 Replace instance dropdown to slider for dicom tag browser 2021-01-28 15:43:51 -03:00
ohif-bot 587de94cea chore(release): publish [skip ci]
- @ohif/extension-vtk@1.10.2
 - @ohif/core@2.12.1
 - @ohif/ui@1.8.1
 - @ohif/viewer@4.8.2
2021-01-21 12:35:41 +00:00
igoroctaviano 8038009afd Add exit mpr action 2021-01-20 20:59:03 -03:00
igoroctaviano f07f21117d Notify user of buffer errors from vtk / add possibility to add actions to notifications 2021-01-20 18:05:20 -03:00
ohif-bot d282f72d75 chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.10.0
 - @ohif/extension-dicom-html@1.3.0
 - @ohif/extension-dicom-rt@0.6.0
 - @ohif/extension-dicom-segmentation@0.5.0
 - @ohif/extension-dicom-tag-browser@0.2.0
 - @ohif/extension-vtk@1.10.0
 - @ohif/core@2.12.0
 - @ohif/ui@1.8.0
 - @ohif/viewer@4.8.0
2020-12-10 10:09:50 +00:00
Davide PunzoandIgor Octaviano 29fceacee9 feat: visualize overlapping segments in cornerstone (#2185)
* feat: visualize overlapping segments

load multiple labelMaps (splitted by dcmjs because overlapping) in a segmentations [IDC2164]

Dynamically update active labelmap [IDC2164]

Co-authored-by: Davide Punzo <punzodavide@hotmail.it>
Co-authored-by: Igor Octaviano <igoroctaviano@gmail.com>
2020-12-10 11:04:27 +01:00
ohif-bot 5210c80369 chore(release): publish [skip ci]
- @ohif/extension-dicom-tag-browser@0.1.1
 - @ohif/extension-vtk@1.9.2
 - @ohif/core@2.11.1
 - @ohif/ui@1.7.1
 - @ohif/viewer@4.6.2
2020-12-03 15:19:00 +00:00
Igor OctavianoandDavide Punzo f57725ac8b fix: fallback to original dataset VR for XS
Co-authored-by: Davide Punzo <punzodavide@hotmail.it>
2020-12-03 16:15:27 +01:00
ohif-bot 138e0fb3bf chore(release): publish [skip ci]
- @ohif/extension-dicom-tag-browser@0.1.0
 - @ohif/extension-vtk@1.9.1
 - @ohif/core@2.11.0
 - @ohif/ui@1.7.0
 - @ohif/viewer@4.6.1
2020-12-03 13:13:18 +00:00
be494a7376 feat: add show scroll option to modal
Co-authored-by: Erik Ziegler <erik.sweed@gmail.com>
Co-authored-by: Davide Punzo <punzodavide@hotmail.it>
2020-12-03 14:09:45 +01:00
ohif-bot ab23feefbb chore(release): publish [skip ci]
- @ohif/extension-vtk@1.9.0
 - @ohif/ui@1.6.0
 - @ohif/viewer@4.6.0
2020-12-03 12:29:32 +00:00
Igor OctavianoandDavide Punzo 4c079044f6 feat: Add error boundary and retry logic for network failures during dynamic imports (#2145)
Co-authored-by: Davide Punzo <punzodavide@hotmail.it>
2020-12-03 13:23:43 +01:00
ohif-bot 7eb8c4c641 chore(release): publish [skip ci]
- @ohif/extension-vtk@1.7.15
 - @ohif/ui@1.5.7
 - @ohif/viewer@4.5.23
2020-11-02 10:35:07 +00:00
matthiasg 619f361510 fix: Reordered definitions in providers to prevent uninitialized var access (#2108) 2020-11-02 11:33:16 +01:00
ohif-bot 94a9067fe3 chore(release): publish [skip ci]
- @ohif/extension-debugging@0.1.6
 - @ohif/extension-dicom-rt@0.4.7
 - @ohif/extension-vtk@1.7.9
 - @ohif/ui@1.5.6
 - @ohif/viewer@4.5.16
2020-10-06 09:51:18 +00:00
James Petts cfba4df70e IDC-2064 & IDC-2059 add more options to debug extension (#2069)
* Add more to debug extension.

* Update and comment out unit tests broke from v3.
2020-10-06 11:48:56 +02:00
ohif-bot fab122dd8f chore(release): publish [skip ci]
- @ohif/extension-debugging@0.1.5
 - @ohif/extension-vtk@1.7.7
 - @ohif/ui@1.5.5
 - @ohif/viewer@4.5.10
2020-09-17 18:31:52 +00:00
James Petts 42803b0ae8 [IDC-2006] - optional mailTo for debugging extension. (#2027)
* WIP debug dialog

* Rename the p10 downloader extension to debugger extension, add button to toolbar. Deactivate it by default.

* Fix unit tests

* WIP

* WIP

* Finish mailTo
2020-09-17 20:28:08 +02:00
ohif-bot 5a78da8ff6 chore(release): publish [skip ci]
- @ohif/extension-dicom-html@1.2.8
 - @ohif/extension-dicom-microscopy@0.51.3
 - @ohif/extension-dicom-pdf@1.0.6
 - @ohif/extension-dicom-rt@0.4.5
 - @ohif/extension-dicom-segmentation@0.4.5
 - @ohif/extension-dicom-tag-browser@0.0.2
 - @ohif/extension-vtk@1.7.6
 - @ohif/core@2.10.5
 - @ohif/ui@1.5.4
 - @ohif/viewer@4.5.9
2020-09-10 10:17:12 +00:00
James Petts 0ef88e88eb [IDC-1129] - DICOM Tag Viewer extension (#2022)
* WIP render top level tags.

* Add drop down to select series.

* Fix errors with type 2 sequences.

* WIP swap instance.

* Fix formatting and make fullscreen.

* Remove debuggers.

* Finish formatting.

* Fix error with double SeriesNumber deconstruction.

* Address reviewer comments.
2020-09-10 12:13:24 +02:00
ohif-bot 14da247318 chore(release): publish [skip ci]
- @ohif/extension-vtk@1.6.9
 - @ohif/ui@1.5.3
 - @ohif/viewer@4.2.13
2020-07-23 07:44:17 +00:00
Erik Ziegler 6a77d6c778 chore: Use same config for branch deploys as for deploy previews (#1893) (#1916) 2020-07-23 09:42:42 +02:00
ohif-bot 41225eefc0 chore(release): publish [skip ci]
- @ohif/extension-vtk@1.6.8
 - @ohif/core@2.9.13
 - @ohif/ui@1.5.2
 - @ohif/viewer@4.2.12
2020-07-22 19:12:41 +00:00
Erik Ziegler 7772fee21a fix: Switch DICOMFileUploader to use the UIModalService (#1904) 2020-07-22 21:10:04 +02:00
ohif-bot ab25be3520 chore(release): publish [skip ci]
- @ohif/extension-vtk@1.6.2
 - @ohif/ui@1.5.1
 - @ohif/viewer@4.2.3
2020-06-05 16:03:56 +00:00
Rodrigo AntinarelliandJames Petts 950a54c704 Feat/1767 error boundary stack trace (#1772)
* feat: ErrorBoundary collapsed stack trace

* button styles

* Change "Toggle stack trace" to "Stack Trace"

Co-authored-by: James Petts <jamesapetts@gmail.com>
2020-06-05 18:00:36 +02:00
ohif-bot eab115e70c chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.8.0
 - @ohif/extension-dicom-microscopy@0.51.0
 - @ohif/extension-dicom-rt@0.2.0
 - @ohif/extension-dicom-segmentation@0.3.0
 - @ohif/extension-vtk@1.6.0
 - @ohif/ui@1.5.0
 - @ohif/viewer@4.2.0
2020-06-04 09:54:24 +00:00
c02b232b0c feat: 🎸 1729 - error boundary wrapper (#1764)
* Add error boundaries

* Fix PWA e2e.

* feat: ErrorBoundaryDialog

* replace component to use ErrorBoundaryDialog

* add proptypes

* fix context

* remove ErrorBoundary from extensions

Co-authored-by: igoroctaviano <igoroctaviano@gmail.com>
Co-authored-by: James A. Petts <jamesapetts@gmail.com>
2020-06-04 11:52:30 +02:00
ohif-bot 8a20a0526e chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.7.2
 - @ohif/extension-dicom-html@1.2.2
 - @ohif/extension-dicom-rt@0.1.2
 - @ohif/extension-dicom-segmentation@0.2.3
 - @ohif/extension-vtk@1.5.3
 - @ohif/core@2.9.3
 - @ohif/ui@1.4.4
 - @ohif/viewer@3.11.6
2020-05-04 14:15:22 +00:00
James Petts 5b20d8f323 fix: 🐛 Proper error handling for derived display sets (#1708)
* fix: 🐛 Proper error handling for derived display sets

* Revert idc.js change
2020-05-04 16:10:39 +02:00
ohif-bot 70672ed663 chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.5.2
 - @ohif/extension-dicom-rt@0.0.2
 - @ohif/extension-dicom-segmentation@0.1.2
 - @ohif/extension-vtk@1.3.10
 - @ohif/core@2.6.9
 - @ohif/ui@1.4.3
 - @ohif/viewer@3.8.19
2020-04-09 10:25:11 +00:00
858484f250 Support of RTSTRUCT visualization (#1524)
* Filter segs and fetch correct metadata.

* Initiate seg loading logic on series load into viewport. Need to write.

* Automatic consumption of SEG functional.

* Pull in master.

* Fix issues after pulling in master.

* Clean up old segmentation handlers.

* WIP

* WIP

* Poppulate viewport with metadata.

* Show hide/segmentation in react-vtkjs-viewport.

* feat: 🎸 View segmentations in vtkjs viewport

* Filter segs and fetch correct metadata.

* Initiate seg loading logic on series load into viewport. Need to write.

* Automatic consumption of SEG functional.

* Pull in master.

* Fix issues after pulling in master.

* Clean up old segmentation handlers.

* WIP

* WIP

* Poppulate viewport with metadata.

* Show hide/segmentation in react-vtkjs-viewport.

* feat: 🎸 View segmentations in vtkjs viewport

* Rebase on master.

* format format format

* add basic extension parts

* Updated yarn lock

* Fetch derived/referenced displaysets in sidepanel

* Add buttons, expose seriesDescription, write notes for Danny.

* Add growcut tool extention. -> Move to a seperate repo.

* Change some text fields.

* expose dialog provider

* hide draggable area

* No pointer events for now; need to revisit

* Don't filter seg from the outset for now

* fiddling about

* fix path to series data

* fix logic to determine next available labelmapindex

* Ability to swtich between labelmaps

* Return a promise so we can make sure our labelmap is loaded before pulling metadata

* Better UI to toggle labelmaps

* Fix accidental untoggle of active labelmap for ui

* Remove brush tool from cornerstone extension

* Add cstools in preInit for seg extension

* Add buttons for seg magic

* Hide the measurements panel for now

* Slightly better seg/scissor icons

* Add eraser

* ability to switch segments

* seg color / switcher

* Fix vtk labelmap cache.

* sidepanel should scroll if there's overflow

* Use a fancier range slider

* Slightly prettier buttons

* Push in progress

* A bit more reactive; handle no-meta

* Update to vtk.js 11.14.0 and react-vtkjs-viewport 0.6.0

* chore: kickstart preview

* Fix conflict issues

* Refactor panel

* Isolate increment functions

* Wip segment table

* Hide selector and add scroll to segmentation

* Increase width of segment description

* Hide not used items

* Add new select for segmentations

* Align ui

* Fix default segmentation

* Fix broken import test

* Get measurements panel back and add spacing to grouped buttons

* Hide brush and selector and refresh when switching segmentations

* Add pointer events back and fix broken tests for measurement table

* Update segment list when switching humbnails

* CR Update: Minor UI adjustments

* CR Update: Set active segment

* Move components to components folder

* Add new settings ui

* Integrate configuration

* Improve styles

* Float numbers

* Improve css

* Refresh settings menu if side panel changed

* Fix settings rendering logic and remove comments

* Extract components

* Remove not used tools

* Remove non used extension

* Use style variables and remove comments

* Remove non used dep from lock

* Remove tools

* Remove segmentation from toolbar

* Add todo and brushradius from config

* Fix packagejson growcut import

* Remove webpack config already defined in parent

* Update package json description

* Change component name to british english to us

* Improve prop types

* Rename cornerstone label map event

* Scope css

* Extract and add doc to helper

* Update jsdocs for getDerivedDatasets

* Add proptypes and cr updates

* Update tablistitem proptypes

* config is readonly, rollback destructuring

* Remove event for side panel

* Add jsdocs for util

* Extract getimageid to studymetada

* Use ohif log instead of console

* Remove specific style from side panel

* Fix default props for brush radius

* Descructure configuration props from settings component to avoid invalid props

* Update proptypes to be required (settings)

* Update readme

* Remove commandsmodule

* Get configuration module inside the component

* Set selected segment

* Rename extension and use modality to filter

* Fix for failing tests (#1423)

* hello world

* Finish rebase for Igor.

* Re-fix cornerstoneTools version that got messed up in merge.

* Fix reactivity of isDisabled, write implementation for the SEG panel.

* Nuke yarn.lock to stack CST to 4.12.0

* Remove debugger statements.

* WIP consume RTSTRUCT

* Doc API and add endpoints.

* Rebase on SEG PR.

* Update DICOM Keyword variables.

* Fix metadata vars format

* Add basic RT panel along with configuration

* Wire up configuration with settings component

* Mock structure set tables

* Improve design of settings

* Integrate list of contours

* Extract panel section

* Filter by seriesuid

* Fix slow settings

* Add jump to image

* Fix expandable items

* Improvements and CR update

* CR Update: Remove google config

* CR Update: Remove erase tool test

* CR Update: Remove instance

* CR Update: Fix issue with undefined prop

* CR Update: Update yarn lock

* Hide actions of structure item

Co-authored-by: James A. Petts <jamesapetts@gmail.com>
Co-authored-by: dannyrb <danny.ri.brown@gmail.com>
Co-authored-by: igoroctaviano] <igoroctaviano@users.noreply.github.com>
Co-authored-by: Mirna Silva <mirna.silva@radicalimaging.com>
2020-04-09 12:21:43 +02:00
ohif-bot e5175bf3e6 chore(release): publish [skip ci]
- @ohif/extension-vtk@1.3.9
 - @ohif/core@2.6.8
 - @ohif/ui@1.4.2
 - @ohif/viewer@3.8.17
2020-04-06 08:45:46 +00:00
8c8f69accb Add option for setting maximum concurrent metadata requests (@ckedar), show series in panel before their metadata is retrieved (#1576)
* Show series in Study Browser before their metadata is retrieved

* Switch to decreasing for loop after code review (thanks @ckedar!)

* feat: Limit concurrent series metadata requests (#1581)

* Limit concurrent series metadata requests

* Switch to decreasing for loop after code review (thanks @ckedar!)

* Set default maxConcurrentMetadataRequests to unlimited and add explaination of setting in config

Co-authored-by: kedar.netelixir <kedar.choudhary@netelixir.com>
Co-authored-by: Erik Ziegler <erik.sweed@gmail.com>

* Address comments from code review

* Comment out misbehaving test

Co-authored-by: Kedar <ckedar@gmail.com>
Co-authored-by: kedar.netelixir <kedar.choudhary@netelixir.com>
2020-04-06 10:43:35 +02:00
ohif-bot 3b5f71b0be chore(release): publish [skip ci]
- @ohif/extension-vtk@1.3.1
 - @ohif/ui@1.4.1
 - @ohif/viewer@3.8.3
2020-03-17 22:49:26 +00:00
Darren b269415048 fix: rendering delete button when text is too wide for parent div (#1526) 2020-03-17 18:48:06 -04:00
ohif-bot 6ed1e47a3d chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.5.0
 - @ohif/extension-dicom-segmentation@0.1.0
 - @ohif/extension-vtk@1.3.0
 - @ohif/core@2.6.0
 - @ohif/ui@1.4.0
 - @ohif/viewer@3.8.0
2020-03-13 19:47:28 +00:00
e8842cf8ae feat: Segmentations Settings UI - Phase 1 #1391 (#1392)
* Filter segs and fetch correct metadata.

* Initiate seg loading logic on series load into viewport. Need to write.

* Automatic consumption of SEG functional.

* Pull in master.

* Fix issues after pulling in master.

* Clean up old segmentation handlers.

* WIP

* WIP

* Poppulate viewport with metadata.

* Show hide/segmentation in react-vtkjs-viewport.

* feat: 🎸 View segmentations in vtkjs viewport

* Filter segs and fetch correct metadata.

* Initiate seg loading logic on series load into viewport. Need to write.

* Automatic consumption of SEG functional.

* Pull in master.

* Fix issues after pulling in master.

* Clean up old segmentation handlers.

* WIP

* WIP

* Poppulate viewport with metadata.

* Show hide/segmentation in react-vtkjs-viewport.

* feat: 🎸 View segmentations in vtkjs viewport

* Rebase on master.

* format format format

* add basic extension parts

* Updated yarn lock

* Fetch derived/referenced displaysets in sidepanel

* Add buttons, expose seriesDescription, write notes for Danny.

* Add growcut tool extention. -> Move to a seperate repo.

* Change some text fields.

* expose dialog provider

* hide draggable area

* No pointer events for now; need to revisit

* Don't filter seg from the outset for now

* fiddling about

* fix path to series data

* fix logic to determine next available labelmapindex

* Ability to swtich between labelmaps

* Return a promise so we can make sure our labelmap is loaded before pulling metadata

* Better UI to toggle labelmaps

* Fix accidental untoggle of active labelmap for ui

* Remove brush tool from cornerstone extension

* Add cstools in preInit for seg extension

* Add buttons for seg magic

* Hide the measurements panel for now

* Slightly better seg/scissor icons

* Add eraser

* ability to switch segments

* seg color / switcher

* Fix vtk labelmap cache.

* sidepanel should scroll if there's overflow

* Use a fancier range slider

* Slightly prettier buttons

* Push in progress

* A bit more reactive; handle no-meta

* Update to vtk.js 11.14.0 and react-vtkjs-viewport 0.6.0

* chore: kickstart preview

* Fix conflict issues

* Refactor panel

* Isolate increment functions

* Wip segment table

* Hide selector and add scroll to segmentation

* Increase width of segment description

* Hide not used items

* Add new select for segmentations

* Align ui

* Fix default segmentation

* Fix broken import test

* Get measurements panel back and add spacing to grouped buttons

* Hide brush and selector and refresh when switching segmentations

* Add pointer events back and fix broken tests for measurement table

* Update segment list when switching humbnails

* CR Update: Minor UI adjustments

* CR Update: Set active segment

* Move components to components folder

* Add new settings ui

* Integrate configuration

* Improve styles

* Float numbers

* Improve css

* Refresh settings menu if side panel changed

* Fix settings rendering logic and remove comments

* Extract components

* Remove not used tools

* Remove non used extension

* Use style variables and remove comments

* Remove non used dep from lock

* Remove tools

* Remove segmentation from toolbar

* Add todo and brushradius from config

* Fix packagejson growcut import

* Remove webpack config already defined in parent

* Update package json description

* Change component name to british english to us

* Improve prop types

* Rename cornerstone label map event

* Scope css

* Extract and add doc to helper

* Update jsdocs for getDerivedDatasets

* Add proptypes and cr updates

* Update tablistitem proptypes

* config is readonly, rollback destructuring

* Remove event for side panel

* Add jsdocs for util

* Extract getimageid to studymetada

* Use ohif log instead of console

* Remove specific style from side panel

* Fix default props for brush radius

* Descructure configuration props from settings component to avoid invalid props

* Update proptypes to be required (settings)

* Update readme

* Remove commandsmodule

* Get configuration module inside the component

* Set selected segment

* Rename extension and use modality to filter

* Fix for failing tests (#1423)

* hello world

* Finish rebase for Igor.

* Re-fix cornerstoneTools version that got messed up in merge.

* Fix reactivity of isDisabled, write implementation for the SEG panel.

* Nuke yarn.lock to stack CST to 4.12.0

* Remove debugger statements.

* fix: bump cornerstone-tools version to address toFixed issue

* test: force tests for MISTER^MR to navigate to study directly

* test: remove eraser tool test

* test: count is off by one

* test: don't save SR state for the time being

* test: disable more tests

Co-authored-by: James A. Petts <jamesapetts@gmail.com>
Co-authored-by: dannyrb <danny.ri.brown@gmail.com>
Co-authored-by: igoroctaviano] <igoroctaviano@users.noreply.github.com>
Co-authored-by: Mirna Silva <mirna.silva@radicalimaging.com>
2020-03-13 15:45:26 -04:00
ohif-bot d426b78967 chore(release): publish [skip ci]
- @ohif/extension-cornerstone@2.4.3
 - @ohif/extension-dicom-html@1.1.1
 - @ohif/extension-dicom-microscopy@0.50.7
 - @ohif/extension-dicom-pdf@1.0.2
 - @ohif/extension-vtk@1.2.24
 - @ohif/core@2.5.3
 - @ohif/i18n@0.52.7
 - @ohif/ui@1.3.3
 - @ohif/viewer@3.7.8
2020-03-09 19:04:54 +00:00